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LOCUS XM_017155647 6307 bp mRNA linear INV 09-DEC-2024 variant X4, mRNA. ACCESSION XM_017155647 VERSION XM_017155647.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155647.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6307 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6307 /gene="dlg1" /note="discs large 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066907" CDS 33..4178 /gene="dlg1" /codon_start=1 /product="disks large 1 tumor suppressor protein isoform X4" /protein_id="XP_017011136.2" /db_xref="GeneID:108066907" /translation="MDSDTDDSEREKSSDPNEGLLSSDDKTFHDDDEEEDSSPADDEE EPEGEESLLPQQQKKAQPLVVLVESGSGEAIEEPTEEIEIDRVTLPIKEEREPDPEPE PSPLKHDSVRESVECFYSAQDLLEYGHMLSSSGGSIVRTPDVESGYFEKSESDEGGPP SSSSSLGAARCRLLSGISGLSPVSSSSSRHSAEGLRMELSRFRTMIETLERESLEKTK GKPKPRQRSQLQVESAGESGSDQGSEREMERGFWSTVFGQAGLEISQDEDERIADIKK AHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSK SIQQKTAETLQIATKWEKDGQAVKIADFIKTSNLNRNCAYEFNNDASSNQTNQSANQL NQNQIANNVSAQAQAEALSRTFKSELEEILNQRMRIESDTENAKEPPAEQQQQRSSRS PQQNPQQQQPQQQQQPQQQLGSKSRSGSQTVNGDDSWLYEDIQLERGNSGLGFSIAGG TDNPHIGTDTSIYITKLISGGAAAADGRLSINDIIVSVNEVSVVDVPHASAVDALKKA GNVVKLHVKRKRDTAATTPAAGSAAGDARDGGPKVMEIDLVKGGKGLGFSIAGGIGNQ HIPGDNGIYVTKLMDGGAAQVDGRLNIGDKLIAVRTNGSEKNLENVTHELAVATLKSI TDKVTLIIGKTQHLTTSASGGGGGGLSSGQQLSQSQSQLATSQSQSQVHQQQQQHQTP MVNSQSTGALNSVGHTVVDSPPSPITPQAAAATASVIASNTTVTTVTATNSSSKLPPL LIGANSNSNINSNSNSNSNSNNINNNSSSSSTTAIVATAAAATPPASFYNNNASMPAL PVESNQTNNRSQSPQPRQPGSRYASTNVLAAVPPGTPRAVSTEDITREPRTITIQKGP QGLGFNIVGGEDGQGIYVSFILAGGPADLGSELKRGDQLLSVNNVNLTHATHEEAAQA LKTSGGVVTLLAQYRPEEYNRFEARIQELKQQAALGAGGSGTLLRTTQKRSLYVRALF DYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWE RKMRARDRSVKFQGHAAANNNVDKQSTLDRKKKNFTFSRKFPFMKSRDEKNEDGSDQE PNGVVSSTSELDINSVNNNQANEPQPSEENVLSYEAVQRLSINYTRPVIILGPLKDRI NDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYN DNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNR RMTEEQAKKTYERAIKMEQEFGEYFTGVVQGDTIEEIYSKVKSMIWSQSGPTIWVPSK ESL" misc_feature 861..1031 /gene="dlg1" /note="Region: L27_1; pfam09058" /db_xref="CDD:462665" misc_feature 1497..1763 /gene="dlg1" /note="PDZ domain 1 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ1_Dlg1-2-4-like; cd06723" /db_xref="CDD:467206" misc_feature order(1530..1550,1599..1601,1608..1610,1698..1700, 1710..1712,1719..1724) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467206" misc_feature 1839..2105 /gene="dlg1" /note="PDZ domain 2 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ2_Dlg1-2-4-like; cd06724" /db_xref="CDD:467207" misc_feature order(1866..1886,1935..1937,1944..1946,2046..2048, 2058..2060,2067..2072) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467207" misc_feature 2742..3014 /gene="dlg1" /note="PDZ domain 3 of human discs large homolog 1 (Dlg1), Dlg2, and Dlg4, Drosophila disc large (Dlg), and related domains; Region: PDZ3_Dlg1-2-4-like; cd06795" /db_xref="CDD:467257" misc_feature order(2778..2798,2829..2831,2838..2840,2928..2930, 2940..2942,2949..2954) /gene="dlg1" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467257" misc_feature 3105..3287 /gene="dlg1" /note="Src Homology 3 domain of Disks large homolog proteins; Region: SH3_DLG-like; cd11861" /db_xref="CDD:212795" misc_feature order(3111..3113,3177..3182) /gene="dlg1" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature order(3120..3122,3126..3128,3135..3137,3162..3164, 3216..3221,3276..3278,3282..3287) /gene="dlg1" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212795" misc_feature 3600..4136 /gene="dlg1" /note="Guanylate kinase; Region: Guanylate_kin; pfam00625" /db_xref="CDD:395500" polyA_site 6307 /gene="dlg1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgacgggact tgtagacttg gggaccacaa aaatggattc agacacggat gattcggaac 61 gggagaagag cagcgatccc aacgagggtc tgctgagcag cgatgataag acctttcacg 121 atgacgacga ggaggaggac tcttccccag ccgacgatga ggaggagccc gagggtgagg 181 agtccttgct gccgcagcag cagaagaaag ctcagccatt ggtggttctg gttgagtctg 241 gttcggggga agccatagaa gaacctactg aagaaatcga aatcgatcgg gtgacattac 301 ccattaaaga agaaagggaa cccgatccgg aacccgaacc ctcacccctc aaacacgaca 361 gtgtccgcga gtccgttgaa tgcttctatt ccgcccagga tctcctggaa tatggccata 421 tgctgtcctc ctccggaggc tccatagttc gaacgccgga cgtggagtcg gggtatttcg 481 agaagtccga gagcgatgag ggtggacctc cttcgtcctc ctcctcgctg ggcgccgccc 541 gctgtcgtct gttgtccggc atttcgggac tctcgcccgt ctcctcctcg tcgagccgac 601 acagtgccga gggtctgcga atggaactga gtcgtttccg caccatgatc gaaaccctcg 661 agcgggagag tctcgagaag accaagggca agccgaagcc caggcagaga tcccaattgc 721 aggtggaatc ggcgggggaa agtggttcgg atcagggttc cgaaagggag atggaaaggg 781 gcttctggtc cacggtcttc ggacaggcgg gtctggagat cagtcaggat gaagacgagc 841 ggattgcgga tattaaaaaa gctcatcggg ctctcgagct gctcgaggac tatcacgcca 901 ggctatcgga gccccaggat cgggcactgc gtattgcaat cgaacgcgtt atacgcatat 961 ttaaatctcg cttgtttcaa gcgctgttag atatacaaga attctatgaa ttgacattat 1021 tggatgactc gaagagcata cagcaaaaga cagcggagac cttgcaaatt gcaaccaaat 1081 gggagaagga cggacaggcc gttaaaatag ccgattttat caaaacttca aatttaaatc 1141 gcaattgcgc ctatgagttt aacaacgacg cctcatccaa tcaaaccaac caatcagcca 1201 atcaactcaa tcagaatcag atcgcgaata atgtcagcgc tcaggcgcag gccgaagccc 1261 tcagcagaac atttaagagt gaattggaag agatcttgaa tcagcgaatg cgcatcgagt 1321 cggatacgga aaatgcgaag gagccaccgg ctgagcagca gcagcagcgc agttcccgct 1381 ccccgcagca gaatccgcaa cagcagcagc cgcaacagca acagcagccg caacagcagc 1441 tgggatccaa gtcaaggagc gggtcgcaga ctgtaaacgg cgatgatagc tggttgtacg 1501 aggacattca gctggagcgc ggcaactccg gattgggatt ctcgattgcc ggcggcacgg 1561 ataatccgca catcggcacc gacacctcca tctacatcac caagctaatt tccggcggag 1621 cagctgccgc cgatggacgg ctgagcatca acgacattat cgtttcggtg aacgaggtgt 1681 ccgtggtgga tgtgccgcat gcctccgccg tggatgccct gaaaaaggcc ggcaatgtgg 1741 tcaagttgca tgtgaagcga aaacgtgaca cggcggccac cactccggcc gcaggatcgg 1801 cggctggaga tgcccgcgat ggtggaccca aggtcatgga aatcgatctg gtcaagggcg 1861 gcaagggatt gggcttctcg attgccggcg gcattggcaa ccagcacatc cccggcgaca 1921 atggcatcta tgtgaccaag ctgatggacg gcggagcggc gcaggtggac ggacgtctca 1981 atatcggcga caaactcatt gcagtgcgca ccaatgggag cgaaaagaat ctggagaacg 2041 taacgcacga actggcggtg gccacgctaa aatcgatcac cgacaaggtg acgctgatca 2101 ttgggaagac gcagcacctg accaccagtg cgtctggcgg cggaggagga ggcctctcat 2161 ccggacagca gttgtcgcag tcgcagtcgc agttggccac cagccagagc caaagtcagg 2221 tgcaccagca gcagcagcag catcagacgc cgatggtcaa ttcgcagtcg acaggtgcgc 2281 taaatagtgt gggacatacg gttgtcgatt ctccaccatc accaataaca ccacaagcag 2341 cagcagcaac tgcatcagtc attgcaagca acacaacagt caccacagtc acagccacca 2401 acagtagcag caagttgccg cctttgctaa ttggcgccaa cagtaatagc aatatcaata 2461 gcaatagcaa cagcaacagc aacagcaata acatcaacaa caacagcagt agcagcagca 2521 cgacggcaat tgttgcaaca gcggcagcag caactccacc cgcctccttc tataacaata 2581 atgcttccat gcccgccctg cctgtcgaat ccaatcaaac aaacaaccga tcccaatcac 2641 cccagccgcg ccagcccggc tcgcgatatg cctccacaaa tgtcctggcc gccgttccgc 2701 caggaactcc gcgcgcagtc agcaccgagg atataaccag agaaccgcgc accatcacca 2761 tacagaaggg accccagggc ctgggcttca atatcgttgg cggcgaggat ggccagggca 2821 tctatgtgtc cttcatcctg gccggcggtc cagccgatct cggatcggag ctgaagcgcg 2881 gcgaccagct gctcagcgtg aacaatgtca atctcacgca tgccacccac gaggaggcgg 2941 cccaggcgct caagacttct ggcggcgtgg tgaccctgct ggcgcagtac cgacccgagg 3001 agtacaaccg cttcgaggcg cgcatccagg agctgaaaca gcaggctgcc ctcggcgccg 3061 gcggatcggg aaccctgctg cgcaccacgc agaagcgatc gctctatgtg cgcgccctgt 3121 tcgactacga tcccaatcgg gacgacggcc tgccctcgcg gggattgccc ttcaagcacg 3181 gcgacatcct gcacgtgacc aatgcctccg acgacgaatg gtggcaggcg cgacgcgttc 3241 tcggcgacaa cgaggacgag cagatcggca ttgtgccgtc gaagaggcgc tgggagcgca 3301 agatgcgggc tcgggatcgc agcgtcaagt tccagggcca tgcggcagcc aataataatg 3361 tggataagca atcgacattg gatcgaaaga aaaagaattt cacattctcg cgcaaatttc 3421 cgtttatgaa gagtcgcgat gagaagaatg aagatggcag cgaccaagag cccaatggag 3481 ttgtgagcag caccagcgaa ctcgacatca atagtgtcaa caacaatcag gcgaatgaac 3541 cgcaaccttc cgaggagaac gtcctgtcct acgaggccgt gcagcgcctg tccatcaact 3601 acacgcgccc tgtgattatt ctggggccgc tgaaggatcg catcaacgat gacctaatat 3661 cggagtatcc cgacaagttt ggatcctgtg tgccacacac cacccgaccc aagcgggagt 3721 acgaggtgga cggcagggac tatcactttg tgtcctcgcg cgagcaaatg gagcgggaca 3781 tccagaacca tctgttcatc gaggcgggcc aatataacga caatctgtac ggcacatcgg 3841 tggccagtgt gcgcgaggtg gcggagaagg gcaagcactg catcctggac gtgtccggga 3901 atgccataaa gcgcctccag gtggcccagc tctatcccgt tgcagtgttc atcaagccca 3961 agtcggtgga ttcggtgatg gagatgaatc gtcgcatgac ggaggagcag gccaagaaga 4021 cgtacgagcg ggcgattaaa atggagcagg aattcggcga atactttacc ggcgttgtcc 4081 agggcgacac catcgaggag atctacagca aagtgaagtc gatgatttgg tcccagtcgg 4141 gaccaaccat ttgggtacct tccaaggaat ctctatgacc aacagccacc acaacttgga 4201 cactgccgcc tcgagttcga tgccgaccgg tctcgagaac aacaatagga gcaacggcgg 4261 cagcagcaac aaatcagcag ccgcactgat gatgcatcac agtagcaaca acagaagcag 4321 caacagcaac aacaactact acaacagcag aagcagccac agcaacagca acaacaacaa 4381 ctacagtact actgacaacg acaggaaacg gaaacagaaa ctagaaaacc agaaaacaga 4441 accactgact acttagaaac ttaaccgaca gacagtaaaa tttatattga cgcagccgca 4501 gcagccaact taatgtagca aattgtccaa agcaatttta tttggatgca ctcattgatg 4561 tacggtcagg tgaacgtaca tcccagcagc tagacgagga tgggcgaaca tcagagcaaa 4621 gcatttggca tttggcaacg tagggaagat gagatgatga gatgggtgtt caaactgaag 4681 cggacaaagg tgtatagttt ttagttagaa caaagttgga tataaacaaa aaaaaaagat 4741 aaagaagcga aatatataat atatatacac accacttata tagactaaga tccgattata 4801 taaaagcata gagatgatca gacgaggaga cgagggcttt agggagttcg ttaagcgcta 4861 gagtgttgtt tgtttatgtt gatgtttata tacgagagcc aagagttata gcgagttagt 4921 tatgttgacg ataatgtgtt ttttgatata tattgatcta tatgaaatat gtattgcctg 4981 gtggttaact ttaagtacga caatgtttag tagctgacta cgaataatga cgacgataat 5041 gacgggacgc agatgcggag gcggatgcga atgcggatgc ggttacggtt gcggatctag 5101 cggaaagtca gataatgacg agaataacga tttacgatta cgattacgat ctaatgataa 5161 tgatataata tatatattga tgaatatcga agctaataac gagatgaaga agaacgttgg 5221 tgcatttgtt gttagatgta tgtaattttt cccactcgcc tttgcctaaa gcaacacaaa 5281 agtaaaaaaa aagtaaaaaa accaagaaga aaacagaaaa ctaaaccgaa atcaataaac 5341 atgcgtatga taaatactag aaactagcgg aaaagttgca tataaaacca tagacattca 5401 ttcacacatc tacttactat atatatatat atatctgtac catttagcct atagtccgca 5461 agagatcgtc gaaacaaagt cattttacta tataaatata cacaaaacac ccgcataatg 5521 taaacttggt gtgcagagag aaaaggaaaa agaagaagaa gtgagaaaaa agcgagagga 5581 gtggagaaat cgaatggaat ttgttgtcgc gttgatttaa atctatataa tgagtaaaat 5641 attgtatatt taacaatcta tgaaacaaat atagtatgta gataaaacac acacacacac 5701 atacacacga acacgaaccc atacaagcat acatggatta ccgttgcggt ctaattttat 5761 acacacaaac acacaagaca aatcgaattg caaaggcaaa taaataatta aataagaaag 5821 cgaaaaagaa gaagaagcag aagcggaaac ggaagtgacg ccaagaagaa gaagaagcga 5881 gctggagatg agatcaactc aaactagata actatacata tatttgctga ttaatttata 5941 tttatataaa ccaatctacg atttatagcc aacgcacaga aaaaacaaac aaaacacatt 6001 cgaaatttgt tcgaaaaaat ttagcaaaat tcaagttgag tgttaacatt attatccatg 6061 cgaatatgct tgaaaatatt attattttct actctgtcca tcgtctctct tgcttccctt 6121 cttacataca tacttactac ttgaaacatt tttttatttg tatttaattt ttttttttta 6181 tattgcaaaa acgtcgcaaa aacgacgcca cagcagcagc agctatggat attatttcaa 6241 aaatatatac atataactat tgtacgaaat aaagagaata caaattgatt ataattttca 6301 caatgta