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LOCUS XM_017155642 2902 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017155642 VERSION XM_017155642.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155642.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2902 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2902 /gene="Sk1" /note="Sphingosine kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066905" CDS 244..2178 /gene="Sk1" /codon_start=1 /product="sphingosine kinase 1" /protein_id="XP_017011131.2" /db_xref="GeneID:108066905" /translation="MTANTATSEEHLLGNGGHAQEPSTPTSSLDTADTSDTTTLPSEL SEIFFVDNSRRKQSIKIQVKLCPEGVYLRRETDEDDHINEQLIRIDDIIGSRYGPRLK KRARGGLTSCRNPQVPTGQEEEPEPDSDNSAYLYIYAYLKKEKPLRRVQTLRILRFRS SNDYGVNLQTAEQWHHTIRRHKRGSGSQFPDSPKPLLILLNPKSGSGKGRELFQKQVA PLLSEAEAQYDLQITTHPQYAKEFVRTRRDLLERYSGIVVASGDGLFYEVLNGLMERL DWRRACRELPLGIIPCGSGNGLAKSVAHHCNEPYEPKPILHATLTCIAGKSTPMDVVR VELAPRDKHYVMYSFLSVGWGLIADIDIESERLRSIGAQRFTLWAIKRLITLRTYKGR VSYLLSKKQKNQEKPVEVAREAKESIPSIRSSLPINANGEFRDLPEEEEEDEQFADAI SLDRSVYRQHADSWHSAMSRRTAYYSLGGPSLRSNRSRMSLSQRIEAANADFAEKVPT GTIPGLQIPVQGCEDWISEEGDFVMVHAAYTTHLSSDVFFAPESRLDDGLIYLVIIRS GVSRHQLLNFMLSLNTGTHLPEDGENDPFIKVVPCRAFRIEPSSSDGILVVDGERVDY GPIQAEVMPGLINVMTTSGQ" misc_feature <820..2103 /gene="Sk1" /note="diacylglycerol kinase/D-erythro-sphingosine kinase; Region: PLN02958" /db_xref="CDD:215517" ORIGIN 1 gttcaccctc gcgattcaga gtttcagtac gaattgtcgt gtcaagcgca caggaagcga 61 tcgcaacccg gatcggattg gatcgtatcg tatcgtatcg gagcccccat atgtactact 121 cttgccatat aaacgaactt cgcatcgcag actttacggt gaatagcgtc gatcgcatgt 181 ggacaaaaca attaaataca aggtcaaaga agcgctaaaa aaacagaaat atagtaaaga 241 aaaatgacgg ccaacacagc gacgtcggag gaacatctgc tgggaaatgg tggccacgcc 301 caagagccct ccacgcccac ctcctccttg gataccgcgg atacttccga tacaactact 361 ttacccagcg aactgagcga gatcttcttc gtggacaaca gccggcgcaa gcagagcatc 421 aaaatccagg tgaaactctg ccccgagggc gtttacctgc gtcgcgagac cgacgaggat 481 gatcacatca acgagcagct gatcaggatc gatgatatca taggttcacg ctatggacct 541 cgtcttaaaa aacgcgctag aggtggcctg acctcctgcc gtaatcccca ggtgcccacg 601 ggacaggagg aggaacccga accggatagc gataatagtg cctatctgta catctatgcc 661 tatttgaaga aggagaagcc gttgaggagg gttcaaaccc tcaggattct acgcttccga 721 tcgagcaatg actatggcgt caatcttcag accgccgagc agtggcatca tacgattcgc 781 aggcataaga ggggttccgg atctcaattt ccggattctc ccaagccgct gcttatacta 841 ctaaatccca aatcgggttc gggcaagggt cgcgaactct tccagaaaca ggtggcccca 901 ctgttgagcg aagcggaggc ccagtacgat ctgcagatca ccacacatcc gcaatatgcc 961 aaggagtttg tgcgaacgag gagggatctc ttggaacgct attccgggat agtagtggcc 1021 tctggcgatg gactcttcta tgaagttttg aacggtctaa tggaacgtct ggattggcga 1081 cgtgcctgcc gggagcttcc cttgggcatt ataccctgcg gttcgggcaa tggtctggcc 1141 aaaagtgtgg cccatcattg caatgaaccc tacgaaccca agcccattct ccatgccacc 1201 ttgacctgca ttgccggcaa gagtactccc atggatgtgg tcagggtgga attggcgccg 1261 agggataaac actatgtgat gtactccttt ctgtccgtcg gttggggtct tatagccgac 1321 atcgatatag aaagtgagcg cctgcgatcg attggagctc aacggtttac cctgtgggcc 1381 attaagcgtt tgattacgct gagaacttac aagggcaggg tatcctattt gctgtcgaag 1441 aagcaaaaga atcaggagaa gccagtagaa gtggccaggg aagccaagga gagtatacca 1501 tctatacgtt cttctttacc cataaatgct aacggagaat ttcgggattt acccgaggag 1561 gaggaagagg atgaacagtt tgccgatgcc atttccctgg atcgttcggt ttatcgccaa 1621 catgccgaca gctggcactc ggccatgtcg aggagaacgg cctactattc ccttggggga 1681 cccagtctgc gctccaatcg cagtcgaatg agtttgagcc aacgcatcga ggcggccaat 1741 gcggatttcg ctgagaaagt gccaacgggc acgattcccg gtctacagat tccagttcag 1801 ggttgcgaag attggatctc cgaggagggt gactttgtga tggtccatgc cgcctacaca 1861 acgcacctct cgtcggatgt gttctttgca cccgaatccc ggctagacga cggcctcatc 1921 tatctggtga tcatcaggag cggtgtgagc cgacatcagt tgctcaattt catgctcagc 1981 ctgaatacgg gcacccatct gcccgaggat ggcgagaatg atcccttcat caaggtcgtc 2041 ccatgccggg cattccgcat cgaaccgagc agctccgatg gcatcctggt tgtggatggc 2101 gaacgggtgg actacggacc catccaggcg gaagtgatgc ccggactgat caatgtgatg 2161 accaccagtg gtcagtagtc ggtagtcagt agtcggtagt cacacggaaa aaaaaaatcg 2221 taatggtgaa tttgatattt tttaaagatc aagtcatatc attttgatat gaataaagat 2281 tatgtcaatc ttttttttta tattatttgc tcaaaaaata ctaaatttgg tatttttatg 2341 atatgataaa atatcatgtt gatatatttg aatcttaaat ttgacataaa tcatatcggt 2401 ttttttctgt gcaatagtag tgcccttcag aactatcaga cgacttggga agtaaagtag 2461 gggaatttga taggcaaata catacaccaa atatatataa aaatcattgc taaccaaata 2521 aaaggtggta aatctattaa aaaatcccaa atctgttaca cattcagtta tcatacattt 2581 tttaactctt cataactcct aagatatttt tctgttcaaa gtatacgatt tttgacatta 2641 ttaggtaata agttatctct gtttctatta ttagtgaatt ccattctcat agttctcaat 2701 cgcaatctgt aatttttcca tccgcccaaa aaaaaaaaaa aaaaaaactt cacaatatgc 2761 acttaagtag ttggttaagt tggtttctat tacttttttt ttgtttgtta atcggtcgat 2821 agtgttaatt attttaagac ccatacgtag acgaataaaa caaataaaaa cgttataaaa 2881 aaagattatg agtggctaca ag