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PREDICTED: Drosophila takahashii ecotropic viral integration site 5


LOCUS       XM_017155639            5963 bp    mRNA    linear   INV 09-DEC-2024
            (Evi5), transcript variant X2, mRNA.
ACCESSION   XM_017155639
VERSION     XM_017155639.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155639.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5963
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..5963
                     /gene="Evi5"
                     /note="ecotropic viral integration site 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108066904"
     CDS             794..3217
                     /gene="Evi5"
                     /codon_start=1
                     /product="ecotropic viral integration site 5 ortholog
                     isoform X1"
                     /protein_id="XP_017011128.2"
                     /db_xref="GeneID:108066904"
                     /translation="MTLTTTTTASSAESQAKMDVKGGALPGEENLPTSEMDLLAKLEA
                     ANKLIESDAKSLNSLHSTHSRKNSDTSQISLTSSGNSVAEEDIWTTWATILNDWEGAL
                     KRKNPCVNELVRRGIPHHFRAIVWQQLSGAAEADKKQYAEYIKATSACEKVIRRDIAR
                     TYPEVEFFKEKDGPGQEALFNVIKAYSLHDREVGYCQGSGFIVGLLLMQMPEEEAFAV
                     LVQIMQQHRMRHMFKPSMSELGLCMYQLENLVQEQIPDMHIHFQQQGFQTTMYASSWF
                     LTLYTTTLNVNLSCRIMDVFLSEGMEFIFKVALALLLTGKETLLCLDMEAMLKFFQKE
                     LPGRVEADVEGFFNLAYSLKLNTKRMKKMEKEYQDLKKKEQEEMAELRRLRRENCLLK
                     QRNELLEAESAELADRLVRGQVSRAEEEETSYAIQTELMQLRRSYLEVSHQLENANEE
                     VRGLSLRLQENNVSIDSNNSRQSSIDELCMKEEALKQRDEMVSCLLEELVKVRQGSAE
                     SEDQIRNLKAKVEELEEDKKTLRETTPDNSVAHLQDELIASKLREAEASLSLKDLKQR
                     VQELSSQWQRQLAENQRSESERTTNAVDSTPKKLLTNFFDSSKSSEHTQKLEEELMTT
                     RIREMETLTELKELRLKVMELETQVQVSTNQLRRQDEEHKKLKEELEMAVTREKDMAN
                     KAREQQHRYSDLESRMKDELMNVKIKFTEQSQTVAELKQEISRLETKNSEMLAEGELR
                     ANLDDSDKVRDLQDRLADMKAELTALKSRGKFPGTKLRSSSIQSIESTEIDFNDLNMV
                     RRGSTELST"
     misc_feature    1130..1753
                     /gene="Evi5"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; Region: TBC; smart00164"
                     /db_xref="CDD:214540"
     misc_feature    <1865..>3076
                     /gene="Evi5"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
     polyA_site      5963
                     /gene="Evi5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtgggcgaa aaaaaaacat tcgtcaattc accgtcgtcg atcgaacgct gtattttttt
       61 ccagtgcaat attcggccga tgaataaaaa gtgatttaaa gtacttctta aaaaaataga
      121 ataataaagt aaataaagtc agaacgaacc gcagtgagcg agagagagag atagcgcgga
      181 gaaaattgct gctgaggtgt gtgctttgcg cgtgtgtgtg tgtgtgtgac gtttacagca
      241 gcagaaagtt cggtgtcgtc aaaattttcg agtattttaa agttaatgca ggcgattctc
      301 gatcggatat gagttgatcg cgagtcatcg atttaatagg atgtgaagaa gtcttgctga
      361 ttgcaaacaa aactaggaaa aaaacgataa acaacggcaa tttgttgctg ccgcagcagc
      421 aacaacaaaa acaacaacac cagcacacta acaccacccc ccgttccagc ctaacggttc
      481 attcacagtg gccgaagaag aagaagaaga ggttacctag aaattcctca atatcgagtg
      541 actactgtcc ctgacgtcac atcattgcca agggctcaat tgcaagtgcg tcggagcgag
      601 atagccatgt gcaaagctgg gaggagcatc atgtggcggc tttagaggat cagctaagga
      661 ttaatcatca cgaatcggga gcactataga tcggaacgag atcgagatcg agttaaccag
      721 gagggaggcc aagattcagc agggagaagg aagtatagac tgagatccgg agatcgtcgt
      781 tctgcgtcag aagatgaccc tgaccacaac gaccactgcc tcatcagccg agagccaagc
      841 gaaaatggac gtcaagggcg gcgcacttcc cggcgaagag aacctgccca cctccgagat
      901 ggatctgctg gccaagctgg aggcggccaa caagctcatc gagagcgatg ccaagtccct
      961 caactctctg cactccacgc acagtcgcaa gaactcggac acgagtcaga ttagcctgac
     1021 gtcgagcggc aactcggtgg ccgaggagga catctggacg acgtgggcga ccatcctgaa
     1081 cgactgggag ggcgcgctga agcgcaagaa tccctgcgtg aatgagctgg tgcgccgcgg
     1141 cattccccat cacttccggg cgatcgtctg gcagcagctg agcggagcgg cggaggcgga
     1201 caagaagcag tatgcggaat acatcaaggc gacgagtgcc tgcgagaagg tcataaggcg
     1261 ggatattgct cgcacctatc ccgaggtgga gttcttcaag gagaaggacg gaccgggcca
     1321 ggaggcgctg ttcaatgtga tcaaggccta ttccctgcac gatcgcgagg tgggctactg
     1381 ccagggctcc ggatttattg tcggcctgct cctaatgcaa atgcccgagg aggaggcctt
     1441 cgctgtgctc gtccagataa tgcagcagca tcgcatgcgg cacatgttca agccatcgat
     1501 gtcggagctc gggttgtgca tgtaccagct ggagaatctg gtgcaggagc agatacccga
     1561 catgcacatc cacttccagc agcagggctt ccagacgacc atgtacgcct ccagctggtt
     1621 cctcactttg tacaccacca cgctgaatgt gaatttgagc tgccgcatca tggacgtctt
     1681 cctcagcgag ggcatggagt ttattttcaa ggtagccctg gccctgctgc tcaccggcaa
     1741 ggaaacgctg ctctgcctgg acatggaggc catgctcaag ttcttccaaa aggagctgcc
     1801 cggtcgcgtg gaggccgacg tcgagggctt cttcaatctg gcctactcgc tcaagctgaa
     1861 cacgaagcgc atgaagaaga tggagaagga gtaccaggac ctcaagaaga aggagcagga
     1921 ggagatggcc gagctgcggc ggctgaggcg cgagaactgc ctgctgaagc agcggaacga
     1981 gctgctggag gccgagagcg ccgaactggc cgatcgcctg gtgcgcggcc aggtttcccg
     2041 ggctgaggag gaggaaacta gctatgccat tcagacggag ctgatgcagt tgcggcgctc
     2101 ctacttggag gtctcccatc agctggaaaa cgccaacgag gaggttcgcg gcctgagtct
     2161 tcggctgcag gagaataatg tatccatcga cagcaacaac tcccggcaat cgtccatcga
     2221 cgagctctgc atgaaggagg aggcgctgaa gcagcgcgac gagatggtct cctgcctgct
     2281 ggaggagctg gtcaaggtgc gtcagggctc cgccgagagc gaggatcaga tcaggaactt
     2341 gaaggccaag gtggaggagc tggaggagga caagaagacg ctgcgcgaga cgacgcccga
     2401 caattcggtg gcccatctgc aggacgagct gattgccagc aagctgcgcg aggcggaggc
     2461 ctcactctct ctcaaggacc tcaagcagcg ggtgcaggag ctgagcagcc agtggcagcg
     2521 gcagcttgcg gagaatcagc gcagcgaaag cgaacgcacc accaatgccg tcgattcgac
     2581 gcccaaaaag ctgctgacca acttcttcga tagctccaag agcagcgagc acacccagaa
     2641 actggaggag gagctgatga ccacgcgcat tcgcgaaatg gagacgctca ccgagctcaa
     2701 ggagctgcgg ctgaaggtca tggagctgga gacccaggtc caggtgtcca ccaatcagct
     2761 gaggcggcag gacgaggagc acaagaagct caaggaggag ctcgagatgg ccgtgaccag
     2821 ggagaaggat atggccaaca aggcgcgcga gcagcagcac agatactcgg atctggaatc
     2881 tcgcatgaag gatgagctga tgaatgtgaa aatcaaattc accgagcaaa gccaaacggt
     2941 ggccgaactg aaacaggaaa tttcccgact agagaccaag aactcggaga tgctcgccga
     3001 gggcgaactg cgcgccaatc tggacgattc ggataaggtg cgcgatctgc aggacaggct
     3061 ggccgacatg aaggcggagc tgacggcgtt aaagagtcgt ggcaagtttc cgggcacaaa
     3121 actgcgcagc tcatcgatcc aatcgatcga atcaacggag atcgacttca acgatctgaa
     3181 tatggtgagg cgcggaagta cggagctgtc gacataacct agagatcgat ccggagaacc
     3241 agcagatgat cctcaccaac caatagccac agccacaacc aggagaatag cagcgagtga
     3301 gagggaagag aaaaatcggg gcagtacagg atacacccat atctatatgg ggaatattga
     3361 gcagcagcga ggtgaagccg atttatatat atcgatatat atgtaagggc aggcctgtga
     3421 tcacaaaagc gaaagtggaa gtaattcaga ggagaaaagg agcaaggtag ttggcagaat
     3481 agttgcaatc ccataacaat attatttatg tataatattc gtttaaacct tactattacg
     3541 atacgaaata ttttattacg attatgttta tctatttttt tttggcaata attttattac
     3601 tgttatgttt tcgatttcgc aatcgaaaca cactcatatt tatttatttt aaatcctaat
     3661 tgaaacgata ttgtgagagt attttaaacc ccccgtgtac attgatcgat ggcaactgat
     3721 ctggaggaga tttgcatttg gataacccct agatatatgt atctatatat cacaatgcaa
     3781 tacaatgaat tttatgtaat cccccgagac cccaaacccc atacccattt ccaaccaggc
     3841 aacctgtgaa ccccttttaa tgtaagtttt aaacgaatca aattgttctt tggccaggcg
     3901 cgaaaaaggt ttttaatcaa aatggaatac ttgatttgtc catttgattt gtattatgat
     3961 ttcatcctgt agaatgatat taactctcaa ccatacacac acatttgtct ggaatgaatt
     4021 ttgtaactct cgtatatagt aagctaaacc aatctaaaat ctaaaactaa aataaaacca
     4081 agtgcgaaag acaaagtaac aagcgtggcc aaatgcagag agaaatgcac gatgatgaga
     4141 aactgacaaa accaatatat aaacaactat tcaaaatagt taaaaacgat atgtgaaaga
     4201 accacgaaat aggggacccc cattttctcc ccgcttaaga acgatattac gataacgact
     4261 acgatattca cactacttac gatattctac ttagttaacg gtagcgcttg tctatatacc
     4321 taaaaacaaa agaagaacgt atgatttata tatggttcct ttaacccata acgatcttaa
     4381 acgatttggc agctggtcgc aaaagccgat tatccacaaa caatataata ataattcagg
     4441 ttgaaccgtt ttccatgtgc aatattatct acctatattc tttttttttt gtttcttaat
     4501 taaattaaat ttctttgtct ataaggagtt tattttttcg ttttatcatt tgtttgcatg
     4561 acgtcctcag tgtttaggtt tgttacttac cgcgtttaag accgatgaac ttaatttgtg
     4621 taattccatt gaattgacca tcatgacaaa gcgaaacttc ttccataaga agttagagat
     4681 cgatgtaata tgtttcgtag cgtgtaagaa tgtaggaatg gcgaaaatga tgtcacaaaa
     4741 ctttgttatg taaacactaa gtatatgtaa tgcttaagtt ttgttcccga cttttgcaaa
     4801 actattagca ttttttgttc tacgcgataa taattaatta ttaacgatta tgattatgtg
     4861 taatgtatgt actgtatatg tattcatgtc tgcggctaaa agacgaggct gctgggggca
     4921 gtattaacaa tcagcgagca gagttaacag acattttaat atatacatat aaaaaaaaaa
     4981 acattcccaa gaaagttaaa tttaaccccc cagaaatcag aagattcccc cgacagcctc
     5041 gggtcttaag aaattggcaa gtctagagtt aattgcgcat tatgttatat ggcaagcgaa
     5101 ggcacaaatt atacgatatc taaaatctaa aatagtttat acaaatttat acatgcaaat
     5161 atgtggagca ttattgttgg ccaaagtcta gactttttgg cccgcgtata tagttggtgt
     5221 taaccgattg accaataagt gtggaatttg tgtgcgaatt actgatcaaa taattgaacc
     5281 acttaggtga tgagtcacaa aagtcgatgg cagctaaatt taatggcttg tcagttcgat
     5341 ttgatattga taaatgtgaa caagaaaaga ctttgcagtt tatcaattcg gcttgcgagt
     5401 gccaacgaca ttttggccag acagaaagca gacggcaacg atttgttgac cctgccagac
     5461 aaaacggtcg aaactccatt gaaaccaatt aattagcggg cacaaccact cgcatatagc
     5521 atatacttaa tgcaaataaa tcaagttcag cttccaaaag gcagtagtct tcaatgttca
     5581 ttttgatttg cacttattta ttgcgtcttg cgtttcttgt ttcattcatt gttgatcatt
     5641 gagcaaaaaa aagaacaaca accaaccgac aaaattcaaa tcacaaaaaa tggaatgtag
     5701 ttgacaacaa aataccacaa caaatagtgt tatatacttt acacatacaa aaaaaacaat
     5761 atatatatag atatatatat acataactat atcaatataa cgataaaact gaaaactgga
     5821 gaacagaaga gagataactc gcagcatgaa agaagtaaca ttcgactaaa actacaaaaa
     5881 tcaataaaat taaacagata tacaaaacga aatcaaagtt acaattttta gtattaaata
     5941 aatcaaatga aaaccaaaag aaa