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LOCUS XM_017155626 3181 bp mRNA linear INV 09-DEC-2024 (LOC108066899), transcript variant X1, mRNA. ACCESSION XM_017155626 VERSION XM_017155626.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155626.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3181 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3181 /gene="LOC108066899" /note="uncharacterized LOC108066899; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066899" CDS 193..3066 /gene="LOC108066899" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017011115.2" /db_xref="GeneID:108066899" /translation="MFLAVNQSLQNTSKKKRKRRTAEDDPQEEDQATTTAAGVPSNLE SSASSDQLVLGAAGGSTCRLCKCPGRQSLALVYIYLGALTLILASLSLVFYTHTQDAS GMPPDLPLDSRAFRVQFQAELLRSEDELRAMVSRILAEEEQQQLGGGTTTRASTASSR TSDPLKNERKFTDNLISHTPPPNGKRMRRDIASSAPASMHADPLIEFFNPNHRKVLDE QDSEIRKRTGQKGAAPGGDEWIYLNTYCRVPEKIITGFCKGTQDYCPPAPQGPTGEVG PKGPTGNPGLPGIPGPKGNRGDVGLPGAPGVDGVGHSGPAGPRGPKGDAGATGRAGLD GRDGVPGEPGLDGVPGRAGADGKNGLSGRDGKDGLHGKDGKDGLSITGPKGAQGPPGE RGLKGIAGPRGRPGKPGTNGTPGVPGINAWKMQFPNGSSSNDLLIPPSITDLQLPDFQ RSVIVEEGRSLNLSCSATGTPTPQVEWRREDGRTINVNGVEMASVSGQFLKFTNITRH QMAAYTCYANNGIAPVANATYLVEVQFAPMISVFRQTIYAEYQSSATLECIVEAFPEP IRYWERAYDGKILDPSEKYGIESFPEGFKTTMRLIISNLRKDDFGYYHCVARNELNAT MVNFEVAPQDPNSETPYVGSGMKVYGQRPPESECPVCDQCPDPSLYQCKDQILNSFEI QPTGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEKFGSWLRDPSPDSDKEKTFVTNEN DPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLVVKLDLI SLKKITTQLPFAGVAAANRLYATDFNYMDFNVDEVGLWVIYSTYNSNNTLVAKLDAET LKMQYNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYNGKLLNTNLPFS NPFSHTTTVGYNPLTVELYSWDKGNALTYPIRYNEQRLIADNS" misc_feature <985..>1443 /gene="LOC108066899" /note="LPXTG-anchored collagen-like adhesin Scl2/SclB; Region: gly_rich_SclB; NF038329" /db_xref="CDD:468478" misc_feature 1549..1791 /gene="LOC108066899" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1573..1587 /gene="LOC108066899" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 1612..1626 /gene="LOC108066899" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 1684..1698 /gene="LOC108066899" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 1726..1743 /gene="LOC108066899" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 1768..1779 /gene="LOC108066899" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 1801..2049 /gene="LOC108066899" /note="Immunoglobulin domain; Region: Ig_3; pfam13927" /db_xref="CDD:464046" misc_feature 2296..3033 /gene="LOC108066899" /note="Olfactomedin-like domain; Region: OLF; pfam02191" /db_xref="CDD:460482" polyA_site 3181 /gene="LOC108066899" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccaacgcgt tcggtagcag ctctctctct ctctctctcc cacacacact cactctctct 61 ctgtctctgt ccgtctgtct ctctccgtct ctgtccgtct ctccttctcc ttcacaccca 121 caatttttga agcgctccag aggaaaagtg tgaaaagttg tcttatgtat acaactccct 181 gaacccggta aaatgtttct ggctgtcaac cagagtctgc agaacaccag caagaagaag 241 cgcaagcggc ggacggcgga ggatgatccg caggaggagg accaggccac caccaccgcc 301 gccggagttc ccagtaacct ggagtccagt gcatcgagtg accagttggt cttgggagcc 361 gccggtggct ccacctgtcg gctgtgcaag tgccccggac ggcagtccct ggccttggtc 421 tacatctact tgggcgccct caccctcatc ctggccagcc tgtcgctggt cttctacacg 481 cacacccagg atgcctccgg aatgcctcct gatcttcccc tggactcgcg agcctttcgc 541 gtgcaattcc aggcggaact actgcgttcg gaggatgagc tgcgggccat ggtcagcagg 601 atactcgccg aggaggagca gcagcaactg ggtggaggta ccaccaccag agccagcaca 661 gcgagcagca ggaccagcga tcctctgaag aacgagcgca agttcacgga caacctgata 721 agccacacgc cgccgcccaa cggaaagagg atgcgccggg acattgcctc ctccgctccc 781 gcctccatgc atgctgatcc cctgatcgag ttcttcaatc cgaaccaccg caaagtgctc 841 gacgagcagg actcggagat ccgcaagcgg acgggccaaa agggcgccgc tcccggcggc 901 gatgagtgga tctacctgaa cacctactgc cgggtgccgg agaagataat cacgggcttc 961 tgcaagggca cccaggacta ctgtccgccg gcgccgcagg gacccacggg cgaggtgggt 1021 ccgaaggggc ccaccggcaa tcccggcctg cctggcattc cgggtcccaa gggcaatcgc 1081 ggcgatgtcg gactgcccgg cgcccccggc gtcgatggtg tgggtcattc gggtccggcg 1141 ggtccgcggg gacccaaggg agatgcgggc gccacaggaa gggcaggttt ggatggaagg 1201 gatggagtac cgggtgaacc ggggctggat ggcgtaccag ggcgggctgg tgctgatggc 1261 aagaatgggc tgtccggtcg cgatggcaag gatgggctgc atggcaagga cggcaaggat 1321 ggtctgtcca tcacgggacc caagggagcc cagggaccgc ccggcgaacg gggtctgaag 1381 ggcattgccg gtccccgcgg tcgtcccggc aagccgggca ccaacggcac acccggagtg 1441 cccggcatca atgcctggaa gatgcagttc cccaatggca gctcctccaa cgatctgctc 1501 ataccgccct ctataacaga tctacaactt ccggacttcc aacgctcggt gattgtggag 1561 gagggcagat cgctgaactt gagctgctcg gccacgggaa ctcctacgcc gcaggtggaa 1621 tggcgtcggg aggatggtcg caccattaat gtcaacggcg tagagatggc ctccgtcagc 1681 ggacagttcc tgaagttcac caatatcaca cgacaccaga tggccgccta cacttgttat 1741 gccaacaatg gcatcgctcc agtggccaat gccacctatc tcgtggaagt gcagtttgca 1801 cccatgattt cggtgttccg tcaaacgatt tacgccgagt accagagtag cgccactttg 1861 gagtgcatag tggaggcctt tcccgaaccc atcagatatt gggagcgagc ctacgacggc 1921 aagatcctcg atcccagcga gaagtacggc attgaatcgt ttcccgaggg cttcaagacc 1981 accatgcgct tgatcatcag taatctgagg aaggatgatt ttggctacta tcactgtgtg 2041 gccaggaatg aattgaatgc caccatggtt aactttgaag tagcacctca agatccgaac 2101 agtgagaccc cttacgtggg cagtggcatg aaggtctacg gccaaagacc cccagaaagc 2161 gagtgtcccg tttgcgacca gtgtccagat cccagcttgt accagtgcaa ggaccaaata 2221 ctgaatagct ttgagatcca acccacgggc aatctgagtt atcccggtct acccaagcga 2281 ccgaaaacct gctatctgta tgccgtgggc aagcccgttt tccacaaggt ggtcaacgaa 2341 aagttcggct cctggctgag ggatccttcg ccggatagcg ataaggagaa gaccttcgtg 2401 acgaacgaga acgatccgta caatttgttt gagttcacca cccgcattca gtaccgaatg 2461 aacagcattc cccggcggaa atacgaaatt caagagggct ttcatggcaa tgctcatgtg 2521 gtcttcaacg gttcgttcta ctatcaacaa aggaactcgg atctggtggt caagctggac 2581 ttgatcagtc tcaagaagat aaccacacaa ttgccatttg ccggagtggc agctgcaaat 2641 aggctgtatg ccaccgactt caactacatg gacttcaatg tggacgaagt gggtctttgg 2701 gtgatctaca gcacctacaa ctcgaacaac acgctggtgg ccaagttgga tgcggagact 2761 ttgaagatgc agtacaactt caatatcacc ctggaccacc atcaattcgg cgagatgttc 2821 atcgtgtgcg gcaatctgta tgccatcgat tcgggcacgg ataagaatac ccagattcgc 2881 tatgtggtcg atctgtacaa tggcaagctg ctcaacacga atctgccctt ctcgaatccc 2941 tttagccaca ccacaaccgt tggctacaat ccccttacag tggaactcta ctcctgggac 3001 aagggcaatg cactcacata tcccatacgc tacaacgaac agcgtctcat cgccgacaat 3061 agttaggaga agatgaagaa ctttaagatc ttaaagatcc taacgagatc ctaacggctc 3121 aaatctaaat agtctaaggc acaataaata aatgtaaagt gttttttttt ccaaaagcaa 3181 a