Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii TWiK family of potassium channels


LOCUS       XM_017155620            2010 bp    mRNA    linear   INV 09-DEC-2024
            protein 7 (LOC108066896), mRNA.
ACCESSION   XM_017155620
VERSION     XM_017155620.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155620.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2010
                     /gene="LOC108066896"
                     /note="TWiK family of potassium channels protein 7;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:108066896"
     CDS             254..1498
                     /gene="LOC108066896"
                     /codon_start=1
                     /product="TWiK family of potassium channels protein 7"
                     /protein_id="XP_017011109.1"
                     /db_xref="GeneID:108066896"
                     /translation="MPIKKVAVKEYDSQDEASTELLEKLKHLDRRVDAAEGGGVAKGA
                     AGGRRSPAGFACWQSVKWKSALNHIGLLVSLSIYCGVGGLIFRHLERPAEVERLSHLK
                     DVVKTHRERFMHTILNNTEVRNLDELLSFELAKYEAAVQLAAEGGLLIDKDKDFPEPY
                     ERWSILQAVFFSSTVLTTIGYGNIVPVTTGGRVFCICFALIGIPFTLTVIADWGRLFA
                     TAVSVFGKHMPTKPKFTNFIGKTWFYAILAVGFLGVYLAAGAGLLLLWEDDWTFFDGF
                     YFCFITMTTIGFGDLVPKKPNYMLLCTLYILIGLALTSTIIELVRRQYATSWAKLQEL
                     SGPMAETLRRLGETAGTGLDYTALQKVLTVSMPKWNSKKNDHSPDIAALEAITNAILK
                     EVKEAQNNKPKVLQIVIYESSV"
     misc_feature    689..904
                     /gene="LOC108066896"
                     /note="Ion channel; Region: Ion_trans_2; pfam07885"
                     /db_xref="CDD:462301"
     misc_feature    <1061..1219
                     /gene="LOC108066896"
                     /note="Ion channel; Region: Ion_trans_2; pfam07885"
                     /db_xref="CDD:462301"
     polyA_site      2010
                     /gene="LOC108066896"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgttgacggt tggttctcct cgggattctg gggctgcgtc gatttgtcga gcttttggcg
       61 cgagtgcgag aaatttcgaa aattgcctga attgcgtgag tgctgcacaa aaaatgctgg
      121 acccacagga ccgaagaggg ccgggcccct aaataaatac ccaacacacc taaataaata
      181 aataaaaata tcaattaaat aaaattaaat taaatgcaat cgaaatatta agtgtggcat
      241 aaacaagatt aaaatgccga tcaaaaaggt ggcggtgaag gagtacgatt cgcaggatga
      301 ggccagcacc gagttgctgg agaagctgaa gcatctcgac cgccgtgtgg atgccgccga
      361 gggcgggggc gtggccaagg gggcggccgg cggacggagg agccccgcag gattcgcctg
      421 ctggcagtcg gtcaaatgga agtcggccct caatcacatc ggactgctcg tctcgctgtc
      481 catctactgc ggcgtgggag gattgatttt tcggcattta gaacgtcctg cggaggtgga
      541 acgtctctcg catctcaagg atgtggtgaa aacccacagg gaacgcttca tgcacaccat
      601 actgaacaac accgaggtgc gcaatctcga cgagctgttg tcctttgagt tggccaaata
      661 tgaagcggcg gttcaactgg cggctgaggg agggctgctg atagataaag ataaagactt
      721 tccagagccc tacgagcgat ggagcattct gcaagctgtg ttcttctcct cgactgtgtt
      781 aaccaccata ggctatggca atattgtgcc agtcacgact ggtggtcgag tattttgcat
      841 ttgtttcgcc ctcatcggca tccccttcac cctcactgtg attgccgatt ggggtcgatt
      901 gtttgccacc gccgtctcgg tttttggcaa acatatgccc accaaaccaa agtttaccaa
      961 ttttattggc aagacctggt tctatgccat tttggccgtt ggctttttgg gcgtttactt
     1021 ggccgccgga gctggtcttc tgttgctctg ggaggacgat tggaccttct tcgacggctt
     1081 ctacttttgt ttcatcacga tgacaaccat aggatttggt gatttggtgc caaagaaacc
     1141 caactatatg ctgctgtgca cgctgtacat tctcattggc ctggccctca catcgaccat
     1201 aattgagctt gtgcggcgac aatatgccac cagttgggcc aagctacagg agctttctgg
     1261 acccatggcg gagactttgc gtcgactggg cgaaacagca ggcactggac tcgattatac
     1321 cgccctgcag aaggtgctaa cggtctccat gccgaaatgg aatagcaaga agaacgatca
     1381 cagtcccgac attgctgcct tggaggccat cacaaatgcc attttgaagg aggtgaagga
     1441 ggcccagaac aacaagccca aggtcctgca gatcgtcatc tacgagtcct ccgtctagat
     1501 tctagattta taaaaaaaaa accaaagaaa aaatcagaca gcgagagagc ttccatcgca
     1561 aagaaaagtg ctgcataatt ttgggcaacc aggcagaaaa aaaaaagaaa gaaaatatca
     1621 agaaaaatat caaacgtagt tagttgcggc cgctgagatc gtcaatcgtc gcccatggat
     1681 tacagtgggc actggctact gtggcactgc cagacttcca tatatgttta gtgtccgtac
     1741 ttatagctat tatatagtca aatgtctagg caataacatt gctcatacgt actgaggtcc
     1801 ccacaacaca aacacacaca cacacatact ctcacacatg caaagcgcgg caggtgattt
     1861 aatatctaca tagataatat atatattgtt ttttttttga ggaattctaa ccgtatgtcg
     1921 tagcctaagt tatcgttaat cttaatcgta actcttgtcc ataccatgca taattgtcat
     1981 cttacaaata aaccaagaaa aagactttaa