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LOCUS XM_017155618 1240 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017155618 VERSION XM_017155618.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155618.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1240 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1240 /gene="Taf8" /note="TBP-associated factor 8; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108066892" CDS 110..1099 /gene="Taf8" /codon_start=1 /product="transcription initiation factor TFIID subunit 8" /protein_id="XP_017011107.1" /db_xref="GeneID:108066892" /translation="MEKVEAVTVPHVDAYRRLLNKAVSQLLVDKGAGQASNQCLETLT QMLQALIGEIGNSAHNYCELSGRTMPTVGDVSLALINMGISISSLDPYMRKETHVPIP LPPQQTQQRQLSLLQAGSKSSHPHYVPSYFPAMPDPHAYIRTPTHKQPVTEYEAIREK AACQKRDIEKALTKFLCKTTETNNLFPTEDNMFPLIACKPAFPPYAAALNPTDQVFDF EELEYHYLVANRTEDVPSKEDGEEGDSENEEMDGDKSKEEKPELEIKPNSTTNKAILE NPNIDNPYLRAATLPKRSKTGAGAPGIMPSRSLASTAPTIPTPSTLEITKSSV" misc_feature 149..394 /gene="Taf8" /note="histone-fold domain found in transcription initiation factor TFIID subunit 8 (TAF8) and similar proteins; Region: HFD_TAF8; cd22918" /db_xref="CDD:467043" misc_feature order(149..151,179..181,203..214,284..286,290..292, 296..301,308..310,320..322,350..352) /gene="Taf8" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:467043" misc_feature order(152..154,161..166,173..178,182..190,197..208, 215..217,221..226,233..238,245..253,257..265,269..277, 281..286,293..295,317..325,332..337,344..346,359..361, 365..367,371..379,383..394) /gene="Taf8" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:467043" misc_feature 485..646 /gene="Taf8" /note="TATA Binding Protein (TBP) Associated Factor 8; Region: TAF8; cd08049" /db_xref="CDD:176263" polyA_site 1240 /gene="Taf8" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gataggcgat tccatctctg atctggcagc actgagcggc gaaaataatt gaattttgtc 61 tttatttttt ttcaacgtaa acaaataagt taaattaaga ctgatccgaa tggagaaggt 121 ggaggcggtg acggtgcccc atgtggatgc gtatcggcgg ctgctgaaca aggcggtgtc 181 ccagctgctg gtggacaagg gcgccgggca ggcgagcaac cagtgcctgg agacgctcac 241 ccagatgctg caggcgctga tcggcgagat tggcaattcg gcgcacaact actgcgagct 301 cagcggacgc accatgccca ccgtgggcga cgtcagtttg gcgctgatca acatgggcat 361 ctcgatctcc agtttggatc cctacatgcg caaggagacg catgtgccca ttccgctgcc 421 gccgcagcag acgcagcagc gacaactgag cctgctccag gcgggcagca agtcctcgca 481 tccgcactat gtgcccagct acttcccggc aatgcccgat ccacatgcct acatccggac 541 gcccacgcac aagcagccgg tgacggagta cgaggccatc agggagaagg ccgcctgcca 601 gaagcgggac atcgagaagg cgctcacgaa gttcctctgc aagaccaccg agacgaacaa 661 tctctttccc accgaggaca acatgtttcc cttgattgcc tgcaagccgg cctttcctcc 721 atatgcagcc gctttgaatc ccacagacca ggtctttgac ttcgaggagc tggagtatca 781 ctatttggtg gccaatcgca cagaggatgt gcccagcaaa gaggacggcg aggagggcga 841 cagcgagaac gaggagatgg acggcgacaa gtcgaaggag gagaagcccg agctggagat 901 caaaccgaat tccaccacga acaaggccat tttggagaac cccaatatag ataatcccta 961 cttgcgagcc gccaccctgc ccaagcgatc caaaacgggt gcgggtgcac cgggaatcat 1021 gcccagccgg agtttggcca gcacggcgcc aacgatacca acgccctcca ccctagagat 1081 aacgaaaagt agcgtataag tgtagcatgc ggttttaaat aatgtttagg gaatcgaaac 1141 actcctcttt taaataaatt acatcaattg cgcgctcgta catatattta tagcattaat 1201 taaatatctt ttttaataaa tgttgcgtta ataacaatta