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PREDICTED: Drosophila takahashii outsiders (out), mRNA.


LOCUS       XM_017155605            2844 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017155605
VERSION     XM_017155605.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155605.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2844
                     /gene="out"
                     /note="outsiders; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108066883"
     CDS             492..2447
                     /gene="out"
                     /codon_start=1
                     /product="uncharacterized protein out"
                     /protein_id="XP_017011094.2"
                     /db_xref="GeneID:108066883"
                     /translation="MEKSSLTEKNHTHVYNDTTKPKKPKRRDKSDLGPDFVAPDGGWG
                     WVVCLAAGLNNFFLFPALQQYGLIYRVRMHSLGFDAKQTTTIVNVVMAISSLVGIVNG
                     AMFRRFTFRQVALTGTTLAFLGIFMSAFCTNFWQYILCLSAVYGIGLGLAMAATSLAV
                     NTYFKQKRRRATGFSWTITGLGPIFFPQVSTFLLDYYGAQGSILIYAGIAMNAVLCAL
                     TLQPVLWHVKKPEKQVVIAIEGGGASETEKLQPDLLEANGNLVDPWKDYECRYCQYQK
                     RGKRGIFSSQYLFNVDDPERPGYEITEPGTPMLARANDGWFGSKLSLTSENAAGGAAR
                     YRTRQALMRQVSASRSRENLDRLEQQQNNRDDGLLSKPNYFNREREDMDRYASKTSVY
                     SKPGQDEQLLRCTCAEDKALLQKTAESLQVELSHQLADDLAEEEAKKRMTFFQKVSKF
                     FDLDLLRDFTFVNLAVGMSIMMFGEMNFSVLTPFILNSFGYSDGQISLVMSLLACMDI
                     SVRFLAPLALEKVKLDNRVLFAFGILCIAVGRVVVSFTSSYEVMIGVFLLIGFGKGFR
                     TIFSPLIIPSYVPLNRLPAASGLQLIFNTMFSFAMGPILGILTEAFGYAATIHTINAL
                     TCLALLLWLTESVVRRILGKPSKGLGQ"
     misc_feature    621..>1154
                     /gene="out"
                     /note="Major Facilitator Superfamily; Region: MFS;
                     cl28910"
                     /db_xref="CDD:475125"
     misc_feature    <1854..2357
                     /gene="out"
                     /note="Major Facilitator Superfamily; Region: MFS;
                     cl28910"
                     /db_xref="CDD:475125"
     polyA_site      2844
                     /gene="out"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgactgctg gccgcgtaac agtaaacaca cccacgagcg gacacgagaa caggcagccc
       61 acacgggtga aaagcaaaac aaaaaccgag tccaagttcc aagttccatt gaagcaaata
      121 cgaaagcgaa ctcccacgaa cgacgcaagg cgaaagagtt tttgtttgtt aacaccaata
      181 caaatattat attgtgctgg ccagaaccga aaagaagagt agaacagctg agctgagctg
      241 tttggttcct tggtcgttct ttggcacttg ctgtttacct gccgccgccg ttgtcgcgag
      301 tttttagtat ttaaacgtct cattttttgt tctgtgtata tttttccaat tttaattctc
      361 tgtgctgctg cacatcccac aaggaaaagt gttgaaattc agcagatcct ctagtaatct
      421 gcctgtgaaa accaaagaag agaaagagcc accaagaatt ttcccagatc aaatcgcatc
      481 gcagcatcgc aatggagaaa tccagcttaa cggagaagaa tcacacccat gtgtacaatg
      541 acacgaccaa gccgaagaag cccaagcgtc gcgacaagag cgatctgggt ccggattttg
      601 tggcgcccga cggaggatgg ggctgggtgg tctgcctggc agcaggtcta aataactttt
      661 tccttttccc ggctttgcag caatatggtt tgatctacag ggtgcgaatg cattccctgg
      721 gctttgatgc caagcaaacg acaactatag ttaatgtggt gatggccatc tcctcgctag
      781 tgggcattgt aaatggagcc atgttccgtc gcttcacatt ccgccaggtg gccctgaccg
      841 gcaccacgtt ggccttcctg ggcatcttca tgtcggcctt ttgcaccaac ttctggcagt
      901 acatcctctg tttgtccgcc gtctatggca tcggtttggg cctggccatg gcggccacct
      961 cgctggctgt taatacatac ttcaagcaga agaggcgccg agccactggc ttctcgtgga
     1021 ccatcactgg cctgggtccc attttctttc cgcaggtttc gacctttctg ctggactatt
     1081 acggtgccca gggtagcatt ttgatctatg ctggcatcgc catgaatgcc gtactctgtg
     1141 ctctcactct tcagccggtt ctgtggcatg tgaagaagcc agaaaagcag gtggtcatag
     1201 ccatcgaagg aggaggagct tctgaaacgg agaaattgca gcccgatttg ctggaggcca
     1261 atggcaatct ggtggatccc tggaaggatt acgagtgcag gtactgtcag tatcagaagc
     1321 gcggcaagcg tggcatcttc tcgtcgcagt atctcttcaa tgtggacgat cccgagaggc
     1381 cgggctatga gatcaccgag ccgggcacac cgatgttggc aagggccaac gatggttggt
     1441 ttggttcgaa gctttcgctg acctcggaga atgcggcagg cggcgcggct aggtatcgca
     1501 ctcgccaggc tttaatgcgt caggtttccg cctcgcgcag ccgcgagaat ctcgatcggt
     1561 tggagcagca acaaaacaac agagatgatg gcctgttgtc caagccgaat tactttaatc
     1621 gcgaacgcga ggacatggat cgttatgcca gcaagacgag cgtctactcg aaaccaggcc
     1681 aggatgagca actgttgcgc tgcacctgtg ccgaggacaa ggcgctgctg cagaagaccg
     1741 ccgaatcgct gcaggttgag ctctcccatc agctggccga tgatttggcc gaggaggagg
     1801 ccaagaagcg catgaccttc ttccagaagg tgagcaaatt cttcgatctg gatctcctgc
     1861 gtgactttac gttcgtcaat ttggccgttg gcatgagcat catgatgttt ggcgaaatga
     1921 acttctcggt gctcacaccg ttcattctga attcatttgg ctactcggat ggtcagatct
     1981 cgttggtaat gtcgctgctg gcctgcatgg atatatcggt gcgattcctt gcgccgctcg
     2041 ctctggagaa ggttaagctg gataaccggg tgctgttcgc ctttggaatc ctctgcattg
     2101 ccgtgggtcg cgtggtggtg tccttcacca gctcctacga ggtgatgatc ggtgtgttcc
     2161 tgcttattgg ctttggaaag ggcttccgca ccatcttctc gccactcatt atacccagct
     2221 atgtgccgct gaatcgtttg ccagctgcct ccggcctgca gctcatcttt aacacaatgt
     2281 tctccttcgc catgggaccc attcttggta tcctaacgga ggcctttggc tatgcggcca
     2341 ccatccatac catcaacgca ctcacctgtc tggccctgct cctttggctc accgagtccg
     2401 tggtgcgacg cattttgggt aaaccctcca agggattggg tcaatagaag aagcagcatc
     2461 cttgctaagg agagagcaag ctgacaaaat cttcatcgga actgaactac ttggccatcg
     2521 caatcccagt tggcgagaga taattcaagc tgtagacata acctagtcca tcatatactt
     2581 cccgatcgat ttgtgtgtat agtattactt gagctagcgg cgcctggagt tgtccgtact
     2641 taaagatacc taagaaacat atatatctct taactagctc ataatcacca tcaccgttcc
     2701 ccatcgctac cttaatttac ggtcaatttt ttttttagct tttgatactc ttcccctaga
     2761 cttattaaat gtacttagtg atatgtgata agtgtattat tgttccgcag ttgataaata
     2821 tgtgtatatt atattatatt atat