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LOCUS XM_017155600 6023 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_017155600 VERSION XM_017155600.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155600.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6023 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6023 /gene="kek5" /note="kekkon 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108066881" CDS 1084..3840 /gene="kek5" /codon_start=1 /product="leucine-rich repeat-containing protein 24" /protein_id="XP_017011089.2" /db_xref="GeneID:108066881" /translation="MMARRLGILLLLLLPLAAGTSDWMQSCGPCHCHWNSGKKSADCK NKALTKIPLDMSNEMQVLDFAHNQIPELRREEFLLAGLPNVHKVYLRNCTIQEVHREA FKGLHILIELDMSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSYLSRI EFRNNRLRQVQLHVFAGTVALSAISLEQNRLAHLHRETFRDLQKLMHLSLQGNAWNCS CELQDFRDFAINKRLYTPPTDCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFVEAN HDNISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVEPMAAESQSSVLTSELRI VGVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYAGAVSSSDGMGLGGMGAIGAPTID PQTNVFLIICLITTTLLLLLIVVVLALFWYCRRIKTYQKDTTMMSGDGLISSKLDKTH NGSMLEGSVIMEMQKSLLNEVNPVEKPPRRTDIESVDGGDDVLEIKKTLLDDTVYVAN HSRDEEAHSVALSDTTTTPRSRHTYVDDAYANSLPPDLLAFPARVPPTSPSMQSSQSN IPDQVIYGIRSPPSLTSPVYTHMTPHGIYGTKTLTAPHNGFMTLQHPKSRNLALIATA NSSRQHQHQLNHQQQQLQLNHQQQQQHLLQQQQQHPLATTSPFLPAPVVYSPATGVVM KQGYMTIPRKPRAPSWAPSTSGGATGGGTIQLSEFQSPTSPNPSETGTATTAELQAEP VYDNLGLRTTAGGNSTLNLNKIAGGSSNSGSQAAGQQYSMRDRPLPATPSLTSVNSAN NAANASKIYEPIHELIQQQQQQLQQQQRLSSLDTEPLYGVRHQGITILPGSSISGAGL AYISPVPSAVSPSHAGDSPKLAKIPPRPPPKPKKKMSVTTTRSGQGSTSQLFDDEGED GTEV" misc_feature <1261..>1722 /gene="kek5" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 1261..1335 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1336..1407 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1408..1479 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1480..1551 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1552..1623 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1624..1695 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1720..1866 /gene="kek5" /note="Leucine rich repeat C-terminal domain; Region: LRRCT; smart00082" /db_xref="CDD:214507" misc_feature 1921..2175 /gene="kek5" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1921..1935 /gene="kek5" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409570" misc_feature 1960..1974 /gene="kek5" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409570" misc_feature 2056..2085 /gene="kek5" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409570" misc_feature 2113..2130 /gene="kek5" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409570" misc_feature 2152..2163 /gene="kek5" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409570" polyA_site 6023 /gene="kek5" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtgaaatga aatgctaaat tgccgttgcc gtcgcgtcgt cgcctttgca ttttcctttg 61 ccgccaattg atggccagtc gcgggtaacg aaacacgaaa agtcgaagtc gagcgtcgcg 121 tcgagtgtgt ttttcaccgc gggaaaaaaa aaaaaaaaaa acacgcggct gttgagtgca 181 ttactcatat tctttttttt cggttacttg caagtgagcg tgaatagagt accaccaccc 241 ccaccccaaa aaaaaacccc ccaaccccaa gcaaaccacc tttacttctt cttcttcaac 301 tcccccctcg ccaaaaggcg attaaatttg ggaatagcgg agagcagagc ggatcaacac 361 aaagcgagag gctatcgtcg atgtcataag ttgtttgctt aatgattgga attaaataaa 421 aaactatatt actacttgaa atgctgagct gctccaacat taataaggtt gtcgtcgtcg 481 tcagcagcag cagccaatcg tcatggtcct tcgagccttc gagcataaac attgaaaaca 541 agcataaaaa caaccgagac acgtgaagca acgaaaaaga aaaaaaactg aaactgaaaa 601 aggaccaagg acgaaggata gttccgccgg cactcttgga acttgttttt gaagggaaac 661 ctgattacca ggttcttgtt aaatgggtaa aaacatcagc aggagcagga gaagcacggc 721 tatttgcgag cttagagccc accactgtcc gccgggacga cgggacatta attaatcacg 781 gccttgtcat tcgcaaggat caaggagtgg cacagcgaac gaacgaagga agaaaaaaac 841 aacacaagcc gaaagagaag ccgaagcgaa gggtgcagaa atcaaattaa cagtgcgtca 901 aaaggattaa ccccgaaaaa gggcaggagt ttagtttaga gcacgtacac aggacgcggc 961 gaggcgagta aagagccccg gactaccgga atcccgacca cttggtggca cgtgttcggt 1021 ggctcgttgt cgcggattat aaacaaatcc cgatacacag aacccagaac ccaaaaccaa 1081 gctatgatgg ccagacgact ggggattctc ctactcctcc tcctcccctt agcagctggg 1141 acatccgact ggatgcagag ctgcggcccc tgccattgcc actggaattc gggtaaaaag 1201 agcgccgatt gcaagaacaa ggcgctgaca aagattcccc tggacatgag caacgagatg 1261 caggtgctgg actttgccca caaccaaata cccgagctgc ggcgcgagga gttcctcctg 1321 gccggtttgc ccaatgtgca caaggtctat ctgcgcaact gcaccatcca ggaggtgcat 1381 cgcgaggcct tcaagggtct gcacatcctg atcgagctgg atatgtcggg caatcggata 1441 agggaactcc atccgggcac gttcgctggc ctcgagaagc tgcgcaacgt gataatcaac 1501 aacaatgaga ttgaagtgct gccgaatcac ctgttcgtca atctcagcta cctttcacgc 1561 atcgagtttc gaaacaatcg actgcggcaa gtgcaactgc atgtgtttgc cggcacggtg 1621 gcgctgagcg ccatttcgct ggagcagaat cgattggccc atttgcatcg ggagacattc 1681 cgggatctgc agaagctgat gcatttgtcg ctgcagggca atgcgtggaa ctgcagctgc 1741 gagctgcagg atttccggga ctttgcgatc aacaagcgtc tgtatacgcc gcccaccgac 1801 tgccaggagc cgccgcagct gcgtggcaag ctgtggagtg aggtgccctc tgagaacttt 1861 gcctgccggc cacgcatcct gggctccgtg cgatcctttg tggaggcgaa tcatgacaac 1921 atctcgctgc cctgccgcat tgtcggcagt ccgcggccga atgtcacctg ggtgtacaac 1981 aagcggccgc tgcagcagta cgatccccgg gtgcgagtcc tcacctccgt ggagccgatg 2041 gcggcggagt cccagtcctc ggttctcacc tcggagctgc gcatcgtggg cgtgcgggcc 2101 tcggacaagg gagcctacac ctgtgtggcc gacaatcggg gaggaagagc ggaggcggag 2161 ttccaattgc tcgtcagcgg cgattatgcc ggcgccgtat cctcgtccga tggcatggga 2221 ttgggcggca tgggtgccat tggagcgccc accattgatc cgcaaacgaa tgtgttcctg 2281 atcatctgcc tgattaccac gacactgctg ctactcctga ttgtcgtggt gctggccttg 2341 ttctggtatt gccgaaggat taagacctac cagaaggaca ccaccatgat gagcggcgat 2401 gggctgatct cgtccaagct ggacaagacg cacaacggct ccatgctcga gggctccgtc 2461 attatggaga tgcagaagag cctgctcaac gaggtcaatc ccgtcgagaa gccgccacgg 2521 cgcacggaca tcgagagcgt ggacggcggc gacgatgtgc tcgagattaa gaagacgctg 2581 ctcgacgaca cggtttatgt ggccaaccac tcgcgggacg aagaagccca ctcggtggcc 2641 ctctcggaca cgacgaccac gccccgatcg cgacacacct acgtggacga cgcctacgcc 2701 aatagcttgc cgccggacct gctggccttc cccgcccgcg tgccgcccac ctcgccctcg 2761 atgcagtcct cgcagtcgaa catccccgac caggtgatct acggcatccg ctcgccgccc 2821 tcgctgacca gtcccgtcta cacgcacatg acgccgcacg gcatctacgg caccaagacg 2881 ctcacagctc cgcacaatgg cttcatgacg ctgcagcatc caaagtcgag gaacctcgcc 2941 ttgattgcca ccgccaacag tagtcgccag catcagcatc agctgaatca tcagcagcag 3001 cagctgcagc tgaatcacca gcagcagcag cagcatctcc tccagcaaca gcagcagcat 3061 ccgctggcca ccacatcgcc cttcctgccc gcccccgtcg tttactcgcc ggccacgggc 3121 gtggtcatga aacagggcta catgaccata ccgcgcaagc cgcgagcacc tagctgggcg 3181 cccagcacct cgggtggagc cacaggcgga ggaaccatcc agttgagcga attccagagc 3241 cccacatcgc cgaatcccag cgaaacaggc actgccacca ccgcggaact tcaggcggag 3301 cccgtttacg acaatctggg gctgcgcacc acagccggcg gtaattcaac attaaatcta 3361 aacaagatcg cgggtggaag ttctaattcc ggctcccaag ccgcaggtca gcagtactcg 3421 atgcgggatc gtccgctgcc ggccacgccc agtttgacgt cggtgaactc ggcgaacaat 3481 gcggcgaatg ccagcaagat atacgagccc atacacgagc taatacagca gcagcagcag 3541 cagttgcagc agcagcaaag gctaagctcc ttggacacgg agccgctgta cggtgtgcgg 3601 caccagggga tcacgatact gcccggttcg agtatcagtg gggcaggatt ggcctatata 3661 tcgcccgttc cgtcggctgt ttcgcccagc catgccggtg actcgccgaa gctggccaag 3721 attccaccgc gaccaccgcc gaagcccaag aagaagatgt ccgtgacgac gacgcgcagc 3781 ggtcagggca gcaccagcca gctcttcgat gacgagggcg aggatggcac cgaggtctag 3841 tttggcacct agtttggatg atatgagagt ggaggaaacg gaatggtaac ttggagatgc 3901 agcaaaatat aacatcaaca tccgctgttg cggcttgtaa aaatagccga cagaagtaag 3961 gattctatac tgttctgttc cgtggttcac gccactgcgt gacttgtgtg ccaaacgact 4021 gatgtaggtt ttagtaatta aatcgatgaa catgcaacac aacagaagtc ttcggatgca 4081 aataaacaga agacagaaga cagaagagag actccaatcc cttagggcga attgaaatcg 4141 cttttagaac agaacaacca tctctaatcc caaattcgta tttgcggaaa tacgtaaaaa 4201 cacccaattt ttaaatatat accacctttt tttgtgtaga ctatagttag tttggtacaa 4261 aatgcattat tcgtatatag agagacatat atatacacgc aattttaaag attatatata 4321 aacaagaaat atcctataat gaaaaaaaat aatatataca aaaatccatt ttcaaatcaa 4381 cgacagttta tttaagtgca aaaatttaaa aaaacaaaaa caaaaacata atttttcaaa 4441 attttgcaaa attttataaa attgtaaatg tcaaatgcat acagttaatc gcattaagct 4501 atatataaaa taattacata tatatatata tatatatact ttgcgtaaga acaaccacaa 4561 aatacatcct taattttttt ttttgtttta cgaaagccac cacgaatcgg gaaatgaact 4621 aaacacgaaa gtatatttga tagcgggtaa gtttgttaag tgcattagag cgttagggta 4681 aagataatga taaagagttt gcattcgcaa ttaaaacaat gaattgaaac ttctatgtat 4741 acatatagtc tagaaagaag gcagaaaggc ggcagcataa gtgcataagt gcagctataa 4801 taacgattgt actagttata aaaaaaaaat atatatataa aataaatctg tatgtacatg 4861 gacttacgta tgacattcta ggcattaagt acacaaatta aaaaagaaca gaaacataaa 4921 cagaagaaga aaagttataa gcaggccata tatgtacgta tgtctgagaa tacccttgaa 4981 attaccttca ccccttcaca cacgactcat ttaatatcca aacaaaatat atatacaagg 5041 catttagcag caatcattct aaatacatga taacgaatat agaccattaa agattaaaga 5101 caacaacaaa gtatcgttaa gagaaatgaa attataaaaa taaatatcgg ataattcagc 5161 atgctagcta ttagctaccc tcagtagtta aagatcagat atcagatgat tcacctacca 5221 aaaccttacc ataccttacc taccaatcaa acaaactata taccataatt ttttttatat 5281 tatttatatt aattgtactt ttaatttcct gcaccacctg caccaccata taggcgatct 5341 atgcatctgg atgcattttt atttaataaa aatgcacttt caggcactgc caaactactt 5401 tatttcataa gtgtgaacag gaaatagaaa aaaaaataaa atattaaata atatatgatt 5461 tcctgttaaa ggcgaaggcg aaggcgaagg caggcctaga aatgatctga gagttaaata 5521 atagatgaga catgtaaagt tttcagcccc atacttgccc ctagaaaaaa cattattcga 5581 ttcgacttag ggtgcaatga tttcataaac aaaatcaaca gaataaatgt acccaatcca 5641 caattggttt taaattaaag taagcaaaag tattacataa ataataagtt accttacgtt 5701 aattttattg tgctggtttt tttttgtatt cagcgttttt acacagtaat tatttgtaga 5761 attttcttta caatttggac aagcgcgcaa cataattgta ataaatatct cggaaacgca 5821 aaaaacattt ctaaaacctc gaaaaaacca taaaaatgac gttgcgaaca aattgttcaa 5881 attagctcaa aatcaaaaca attataatta aaaattgtaa tctaattgta attgatagaa 5941 gggttcttat atatacgttt tttataattt tgcataattt gcctaacata taaaatattg 6001 aaataaacta tgaataaaac gaa