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LOCUS XM_017155597 1341 bp mRNA linear INV 09-DEC-2024 rhino-like (LOC108066877), mRNA. ACCESSION XM_017155597 VERSION XM_017155597.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq; includes ab initio. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017155597.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1341 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1341 /gene="LOC108066877" /note="chromo domain-containing protein rhino-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:108066877" CDS 1..1341 /gene="LOC108066877" /codon_start=1 /product="chromo domain-containing protein rhino-like" /protein_id="XP_017011086.2" /db_xref="GeneID:108066877" /translation="MSQAPSDPDSAGGGAEPIEDQSDAQSGEYEVENFLSHNYLRGRK QFLVKWKGYPADQATWVPMEDLKNCLATLADYEEEILVMTLLKETHEAKLLAKKLKEQ EERYRRSLTVPTYVMFKGRKCTPVFFEQEDFLGFHPLPTIDLTGDDPRDHEMEGASIS SGTHSDESSQEGSTKQVSPTVAIASGGKDQEQGVLDGQEYGAASLPSLDAGETEPVTI ASPMEIDEEASDEETKQVSPTAAIASGGKNQEPEILDGQESGAASLPSLDAEETESVT IATPMELDEESSSDEESSSDEDSSSDEESSSDEESSSDEKSSSDEESSEEEESSKEEE AESSSFLTVSQINTQLKLDELLADLERTIGENTLYPEEKKGLGWKMPQMTKPCGVERG LQLKKIHHCFKARGHLFFCVKWKGCPTMDSVTLPSIKYLYPMHIIQFLETLKRG" misc_feature 82..231 /gene="LOC108066877" /note="CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains; Region: CD_CSD; cl28914" /db_xref="CDD:475127" misc_feature order(85..99,142..144,148..159,169..171,175..186,190..195, 214..216,223..228) /gene="LOC108066877" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:349274" misc_feature 1177..1326 /gene="LOC108066877" /note="chromo shadow domain; Region: CSD; cd00034" /db_xref="CDD:349275" misc_feature order(1189..1191,1195..1209,1231..1233,1258..1260, 1318..1320) /gene="LOC108066877" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:349275" misc_feature order(1207..1209,1222..1224,1273..1278,1297..1302, 1306..1311,1318..1323) /gene="LOC108066877" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:349275" ORIGIN 1 atgtctcaag caccgagtga tcccgactcc gcaggcggag gggctgagcc catcgaggat 61 cagagcgatg ctcagagtgg cgagtacgag gtggagaatt tcctttccca caactacctg 121 cgcggtcgca aacaatttct ggtgaaatgg aagggttatc cggcggatca ggccacctgg 181 gttcccatgg aggatctgaa gaactgcctt gccacgctgg ccgactacga agaggagatc 241 ctcgtgatga ccctcctgaa ggagacccac gaggcgaagt tgttagcgaa gaagttaaag 301 gagcaggagg agcgttaccg cagatccttg accgttccca cctatgttat gttcaaaggg 361 aggaagtgta cgccagtttt tttcgagcag gaagacttcc tggggttcca ccccctacca 421 actatagatc tcaccggcga cgatcccaga gatcatgaaa tggaaggtgc ctccatcagc 481 tcggggaccc acagtgatga atcttcgcag gaaggatcca ccaaacaggt ttcaccaact 541 gttgcgattg ctagtggtgg aaaggaccag gagcaagggg ttctagatgg ccaggaatac 601 ggggcagcat cgcttccttc attggatgct ggagaaactg agccggtgac cattgcttca 661 ccaatggaga tcgacgaaga agcctctgat gaggaaacca aacaggtttc accaactgct 721 gcgattgcta gtggtggaaa gaaccaggag ccggagattc tagatggcca ggaatccgga 781 gcagcatcgc ttccttcatt ggatgctgaa gaaactgagt cggtgaccat tgctacacca 841 atggagctcg acgaagaatc ctcctccgac gaagaatcct cctccgacga agattcctcc 901 tccgacgaag aatcctcctc cgacgaagaa tcctcctccg acgaaaaatc ctcctccgac 961 gaagaatcct ctgaggagga agaatcctct aaggaggagg aggcggaatc cagctctttt 1021 ctaaccgtga gccagataaa cacccagctt aaactggacg agctgcttgc cgacttggag 1081 cgcaccatcg gtgagaacac actttaccca gaagaaaaga agggacttgg atggaaaatg 1141 ccgcagatga caaaaccctg cggcgtagaa cgcggtctgc agttgaagaa gattcaccat 1201 tgcttcaagg ctcgcgggca tctcttcttt tgcgtcaaat ggaagggatg tcccaccatg 1261 gactcggtga ctctgccgtc catcaagtat ttgtacccga tgcacattat ccagttcctt 1321 gagacactga agcgtggcta a