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LOCUS XM_017155506 2999 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017155506 VERSION XM_017155506.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155506.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2999 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2999 /gene="pira" /note="pirate; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066820" CDS 226..2004 /gene="pira" /codon_start=1 /product="sentrin-specific protease 6" /protein_id="XP_017010995.2" /db_xref="GeneID:108066820" /translation="MERILKRRLPLSPLELQHKCEQLVDKAVRPISRNDYLILSRQLV INRLASGGGDWSFDRRSAKMLVVLECGQQHIITFTLPSSHCTVQDLLRQVDIQFDEST TIDAAEHAGGSIRVVVSVGFRMKVSAQEMVAHAEEMYREMQQAAADANPAKKRKREHN GSSAEAPRRGKKHKKRRSSGKEAQGAERNGKKLKKSSQPAAPNNPQVSEPKPKAQSSI LATTTTTASWSAAGADRTPEERAERSRLRRNRRWILSRDCDDDDNDEPVVLLSSSEED DEQQAEEQQQQSAADENVHLLMYPPTGTGGLSISMKDYMCLSSGSYLNDIIIDFYLRW LKDHVISEAQRERTHIFSSFFHKRLTTLTRPINLKQTAAQKRHERVKKWTRTVDIFDK DFIIVPFNEQAHWLLAIICFPSLQGPVAMGGDDGAIKQPVILIFDSLAVTSRHRAIAI LRDYLTCEYRAKNPDGQAHVFNKDNMPGHRVEVPQQENLTDCGLYLLQYVEHFFTQPI RDYRLPIAELSNWFDLLTVTKKREDIANLIQRLMDEGNPQQQQRKVLPVIEFPTLNGQ LVEEQEQEEDEEEERGHQGEEKRRKT" misc_feature 1189..1755 /gene="pira" /note="Ulp1 protease family, C-terminal catalytic domain; Region: Peptidase_C48; pfam02902" /db_xref="CDD:397169" polyA_site 2999 /gene="pira" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgatatc gataggaccg ctggcacaga tgttttggat acagcactct ttacctttga 61 aactaggacg ccgtttgcag gaaaagccga atatttcgag gaccgggagt ccggaaatcc 121 caaccgccgc ggcccgagca acccgggaat tttcaaccat ttccaggaaa cgtctgttcg 181 cgatgttcac acggtgaatt tgaatttggt ttgtatcgag gaataatgga gcgaatcctg 241 aagcgccgac tacccctctc cccgctggag ctgcagcaca agtgcgagca gctggtggac 301 aaggcagttc gtccgatttc ccgcaacgac tacctaatcc tctcccgcca gctggtcatc 361 aatcggttgg ccagcggtgg cggtgattgg tccttcgacc ggcggagcgc caagatgctg 421 gtggtcctcg agtgcggcca gcagcacatc atcaccttca cgctgcccag ctcgcactgc 481 acggtgcagg atctgctccg ccaggtggac atccagttcg acgagagcac caccatcgat 541 gctgcggagc acgcgggcgg cagcatccgc gtcgtggtct ccgtgggctt ccggatgaag 601 gtcagtgccc aggagatggt tgcccatgcg gaggagatgt acagggagat gcagcaggcg 661 gctgcagatg ccaatcccgc caagaaacgc aagcgggagc acaatggcag ctccgcggag 721 gctcctcgca ggggcaaaaa acacaagaag cggcgttcga gtggcaagga agctcaagga 781 gccgagcgga atggcaagaa gctcaagaaa agcagccagc cagctgctcc aaacaacccg 841 caagtcagcg agccgaagcc caaggcgcaa tcctccatcc tggcaaccac caccaccacc 901 gccagctgga gtgcagctgg agcggacagg acgcccgagg agcgggccga gcgcagccgc 961 ctgcgcagga atcgccggtg gatcctcagt cgcgactgcg atgatgatga caacgatgag 1021 ccggtggtgc tgctgagcag cagcgaggag gatgatgagc agcaggcgga ggagcagcag 1081 cagcagtccg ccgccgatga gaatgtgcat ttactgatgt atccgcccac cggaaccggc 1141 ggcctgagca tcagcatgaa ggactacatg tgcctgagca gcggcagcta tctgaacgac 1201 atcatcatcg acttctatct gcgctggctc aaggatcatg tgatatccga ggcgcagcgc 1261 gaaaggacgc acatcttcag ctcgtttttc cacaagcgac tcacgacgct gacgcgtccg 1321 atcaacttga agcagacggc ggcacagaag cgacacgaga gggttaagaa gtggacccgc 1381 acggtggaca tcttcgacaa ggacttcatc atagtgccgt tcaacgagca ggcccactgg 1441 ctgctggcca tcatctgctt tcccagtctc cagggaccgg tggcgatggg cggcgatgat 1501 ggggcgatca agcagccggt gatcctcatt ttcgactctc tagcggtaac ctctcgccat 1561 cgggccatcg ccattttgag ggactatctc acctgcgagt acagggccaa gaatcccgat 1621 ggccaggcgc atgtcttcaa caaggacaac atgcccggcc atcgcgtgga ggtgccgcag 1681 caggagaatc tcaccgattg cggcctctat ctgctgcagt atgtcgagca cttcttcacg 1741 cagcccatcc gcgactaccg gctgcccatc gccgagctga gcaactggtt cgacctgctg 1801 acggtcacca agaagcgcga ggatatcgcc aatctcatcc agaggctgat ggacgagggc 1861 aatccgcagc agcagcagcg caaggtgctg cccgtcatcg agtttcccac tctaaatggg 1921 cagttggtgg aggagcagga gcaggaggag gatgaggagg aggaacgggg tcaccaagga 1981 gaggaaaaga ggcgtaagac ttaagagtga agtcaccatg gagagaaaaa ggaccagata 2041 gcggtcaagg ggtcaacaat gtaaaaaaaa ggtcaccaat caaagaaaat gggtcaccaa 2101 ggaaagaaaa agaaacagaa agtgatgtag gggtcaccaa actaaagaat gaggtcacca 2161 atctgagaaa atgggtcacc agagaaagaa agatggccag aaagtgatgc agaagtcacc 2221 aatctaagat cactaagaaa ataggtcacc aaggaaagaa aaagcaacag aaagttatct 2281 aggggtcacc aatctaaaga atgaggtcac caatcgatga aaataggtca ccaagaaaag 2341 aaaaatgacc aaaaagtgat gtaggggtca ccaatttaaa gaacaaggtc actagtgaaa 2401 gaaaaatgac cagaaagtca ccaatctgaa gagtgaggtc acccacagga gaaaaagggt 2461 aaccatggag agaagaagaa accgaaagtg ttgtaggggt caccaatcta aagaatggtt 2521 attggttacc aaggaaagaa aaagcaacag aaagtgatct aggggtcacc aatctaaagg 2581 tcgaggtcac cataaaagaa actgggtcac cagacccccc caaaaaaaat ccagtcattt 2641 gcacaataag atagctttac atattaccaa aaatgaatcc taagataggc caacaaccct 2701 agaatcgcag ggtatcgccg atcggcatta tacccgtttc taagcccaca cacacacaca 2761 cacacacaca cacacgcata tacgatctct gtgtgttggt gggggtttcg gcgataagaa 2821 aatcgagcca taaagtcgcg ccggcgattc tgctgacgct cagttgcttt ggagcgattc 2881 ctcgacgcag acgacgaacg gcggagttta cggaacgtca gaaaaacaaa aactacaaca 2941 aaaaaacagt ggaaagagca agagcaaagc acaagcgaat atcgagcaca aagcgaagc