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LOCUS XM_017155309 2280 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017155309 VERSION XM_017155309.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155309.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2280 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2280 /gene="Ndc80" /note="kinetochore protein Ndc80; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066691" CDS 99..2000 /gene="Ndc80" /codon_start=1 /product="myosin heavy chain, clone 203" /protein_id="XP_017010798.3" /db_xref="GeneID:108066691" /translation="MSHLMPRRTSEFRGEVLEERSTAEKRQTRATKRSMVMHTPLSNQ AMPRRASASRFVPSTAERAIPPHTDKKWVAERSHQILEYLHAIHQSEAAAGFISDLSS RPGGLRNMTMKQFVAILNLLFQNIWRNRVTVVGQNHVEDITSAMQKLQYPYQVNKSWL VSPTTQHSFGHVIVLLDFLLDFAPPPFPTEEEDFPFMETTEQPSCSYLNSMHCASMAE LDEEVNALLFAAVGDCIVLWDQELGEEEAKLQAETGDRLISRKCHLPHRQALDQLIDE LRLKLQQLDVELGSSNDLELLMEEQQQLAQQLAHSQADLSQQLKNLDNLGAQAAEKQS NLRQLIEDEQRLAEAVKSQKYSAQELKALQMKCHDAENYSKAYSRQLQEVADLEMHQR VSVSHSWAKLLKSVEAFNSHARHLSMDPVLAAGQKLELTLPMSPNQEQISERVQRLEL LANLLQQQGEQNIERRLTFDQQEDQLKRATIELEGEIATLESQLQQQEHRLTKMEEEN RNRRNLMTQQQLLEDQSDQIGRLEELERRRQAAQERLHTSEQKNEDLLAAAELQQEED HKARNAQLDKCELKLIEGEKELQALHTKLTLNQAKLDEEEQKVHSARLPSFEPVLAAI KKRYFKFNK" misc_feature 195..641 /gene="Ndc80" /note="HEC/Ndc80p family; Region: Ndc80_HEC; pfam03801" /db_xref="CDD:461058" misc_feature 1035..>1724 /gene="Ndc80" /note="Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning]; Region: EnvC; COG4942" /db_xref="CDD:443969" misc_feature <1404..>1943 /gene="Ndc80" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" polyA_site 2280 /gene="Ndc80" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctatcgatta gtcgataaca ggcgcatcca ctgctgattt gaagtaaacg acgcgggatt 61 taattaaatt tccttagatt gttatttatt tgtccaggat gtcgcatctg atgccccggc 121 ggaccagcga gttccgcggc gaagtgctgg aagagcggag caccgccgag aagcggcaga 181 ccagggcgac caagcgcagc atggtcatgc acactccgtt gtccaaccag gcgatgcccc 241 gaagagcctc cgcatcgcgg tttgtgccct ccaccgcgga acgcgcgatt cccccgcaca 301 ccgacaagaa gtgggtggcg gagcggtcgc accagatcct ggagtacctg catgccatcc 361 atcaaagcga ggcggccgca ggattcatct cggatctctc tagccggcct ggcggcctgc 421 ggaacatgac catgaagcag ttcgtggcca tcctcaacct gctgttccaa aacatctggc 481 gaaatcgggt gaccgtggtg ggccagaacc acgtcgagga catcaccagc gccatgcaga 541 agctccagta tccctaccag gtgaacaaat cctggctggt ctcccccacc acgcagcact 601 ccttcggcca tgtgatcgtc ctgctggact ttctcctcga ctttgccccg cctccgtttc 661 ccaccgaaga agaggacttt cccttcatgg agaccacgga gcagccgagc tgctcgtatc 721 tgaacagcat gcactgcgca tcgatggccg agctggacga ggaggtcaac gctctgctct 781 tcgccgcggt cggcgactgc attgtcctgt gggatcagga gctcggcgag gaggaggcca 841 agctgcaggc ggagaccggg gatcggttga tcagtaggaa gtgccatttg ccgcatcgcc 901 aggcgctgga ccagttgatc gacgaactga ggctgaagct gcagcaactg gacgttgaac 961 tgggcagctc caacgatctg gagcttctaa tggaggagca gcaacagctc gcccagcagc 1021 tggcccacag tcaggctgat ctgagccagc agctcaagaa cctggacaac ctaggcgccc 1081 aggccgctga aaagcagtct aatctccgcc agctaatcga ggacgaacag cgcctggcgg 1141 aggcggtgaa gagccaaaag tactcggccc aggagctgaa ggcgctgcaa atgaagtgcc 1201 acgatgcaga aaactactcc aaggcctaca gccgacaact gcaggaggtg gccgatctgg 1261 agatgcacca gcgtgtttcg gtgtcgcaca gctgggcaaa gctattaaaa agcgtcgaag 1321 ccttcaactc gcatgctcgg cacctcagca tggatcctgt cctggccgcc ggccaaaagt 1381 tggagctaac tttgcccatg tctcccaacc aggagcaaat ctccgaacgg gttcagcgcc 1441 tggagttgct ggctaatctc ctacagcagc agggcgagca gaatatcgag aggcgtctaa 1501 cgttcgatca gcaggaggat cagttaaaaa gagcaaccat cgaactggaa ggagagatcg 1561 ccaccttgga gtcccagctg cagcagcaag agcatcgcct gaccaaaatg gaggaggaaa 1621 atcgcaacag gcgcaatctg atgacacagc agcagttgct cgaggatcag agtgatcaga 1681 tcggccgact ggaggaactg gagaggcggc ggcaggcggc gcaggagagg ctccacacaa 1741 gcgagcagaa gaacgaagat cttctcgccg ccgccgagtt gcaacaggag gaggaccaca 1801 aagcacgcaa cgcccagctc gacaaatgcg aactaaaact gatagaaggg gagaaggaac 1861 tgcaggccct gcacaccaag ctcaccctca atcaggccaa actggatgag gaggagcaga 1921 aggtgcactc tgcccggctg ccctcctttg agcctgtgct agcggccatc aaaaagcgat 1981 attttaaatt taacaaatga taatattagc aattacatca agatatgtat acagacacca 2041 gttagacaag aacagaacaa ctgttttgtg aaatgtattt attgtggatt aggtaaattt 2101 ctttaggttc tttattgcca cacggtttat ggttttgtta cggatctccg ctgccttttt 2161 ggattacaaa ttgcacttgg aacggtttag ctttacatgg ttacacatat acactgagtg 2221 gtgggtggag acggcaagga caacttaaac gtaggcgtac ataataaata ttaaacgata