Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017155308 3288 bp mRNA linear INV 09-DEC-2024 AVL9 homolog (LOC108066690), mRNA. ACCESSION XM_017155308 VERSION XM_017155308.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017155308.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3288 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3288 /gene="LOC108066690" /note="late secretory pathway protein AVL9 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108066690" CDS 335..2449 /gene="LOC108066690" /codon_start=1 /product="late secretory pathway protein AVL9 homolog" /protein_id="XP_017010797.2" /db_xref="GeneID:108066690" /translation="MASEPENKPPILHILVVGFHHKLGCQVEFSHPPLISGSTGRHEC PSGWKYLPTLALPDGSHNFAEDTVFFNLPSLYEPAASIYGVSCYRQVRVEKLKIRTAD LTRSTVQKSVCILARLPIYGYIEVKLALIADAFFDQGDFSGTELLVKAYQQLNACLLD DESRRPLRHFHVGLSLREIVLHWRHKALMLFKLLLLQRRVVCFGSPVRQMCVLILGMA SLVPRLLEKGFQEVACVRTSRPLSPMPDFTDSLQREAQAEAELEVAAVSVPAGNLSAE EQKLTPESATAAEGEGEPEDLALVSSAASVGEEQASGDDTSPRSTPNSQSQDSSNGRN SSLTREASVDTLASNLAALCAVNPDEYRAPVSIFASGNLCLPYLSLPYMDLLSDPMVL SYVIGTSNVLFQQKRQLADVLVDIEAANLDAHDPELRRQLVLSTEDLRYMDYIMKHVQ SPKEDAEGSEYWIREQFQGYILALLRTAVAPDATAKENDHFNAHFMAAFKRTQCFQEW YDVRPEPEFFDALPTGHPFAGTLSVADMKLKLAQTMQNSESGRKINQAVNTTSRAVGG AISQAKGAFSSWWSSITTAPPNASAAPATGANGQEGDAGEGAAASQEISVTFQNHKDA EDVSIHLAGQEEAHESHESHNASCEQPQGIVEIGREAELLDKADRQPEEEEAKISAIR PGCGGDVATSAVERSSGDVFIV" misc_feature 365..1765 /gene="LOC108066690" /note="Transport protein Avl9; Region: Avl9; pfam09794" /db_xref="CDD:430832" polyA_site 3288 /gene="LOC108066690" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcattccaat tggagtacgc ctgctgctat cgatatctaa tcacaaaaca caataaacta 61 aaaacaaaag tggctaacta acttgttaaa gaaagcaagc agcagaggaa aggcgcaatt 121 gactcggggc acgactggca aaaccaataa ttgcaaaaaa gagggcgcgc gcggtgggcc 181 gaggaacaat tgcgtggcgt gctaacagac gagtgcgagc gagagggccg atgcccctgc 241 ccaaatagaa ttccatattt tttccggcag gtaaaaaaag gtgaacaagt cgatttttcc 301 ggaggacacc gcctgcggct ccgcgacaag gacgatggcc agcgagccgg agaacaagcc 361 gcccatcctg cacatcctgg tggtgggctt ccaccacaag ctgggctgcc aggtggagtt 421 ctcccatccg ccgctcatct cgggctccac gggccgccac gagtgtccct ccggctggaa 481 gtacctgccc accttggcgc tgcccgatgg gtcgcacaac tttgccgagg acacggtctt 541 cttcaatctg cccagcctgt acgagcccgc cgccagcatc tacggggttt cctgctaccg 601 gcaggtccga gtggagaagc tgaagatcag gacggcggat ctcacgcgca gcaccgtcca 661 gaagtccgtc tgcatcctgg cccgcctgcc catctacggg tacatcgagg tgaagctggc 721 cctgatcgcc gacgccttct tcgaccaggg cgacttctcc ggcaccgagc tgctggtgaa 781 ggcctatcag cagctgaacg cctgcctgct ggacgacgag tcgcgccgcc cgctgcgcca 841 cttccatgtg ggcctgtcgc tgcgcgagat agtgctccac tggcgccaca aggcgctgat 901 gctcttcaag ctcctgctcc tgcagcgccg cgtcgtctgc ttcggctcgc cggtgcgcca 961 gatgtgcgtc ctcatcctgg gcatggcctc gctggtgccg cgcctgctgg agaagggctt 1021 ccaggaggtg gcctgtgtgc gcacctcgcg gccgctctcc cccatgccgg atttcaccga 1081 ctcgctgcag cgggaggcgc aggcggaggc ggaactggag gtggctgcgg tatcggtgcc 1141 agcggggaat ttgtctgccg aggagcagaa acttacgccg gaaagcgcca cggcggcgga 1201 gggggagggg gagcccgagg acctggccct cgtctcgtcc gccgcctcgg tgggcgagga 1261 gcaggccagc ggcgacgaca cctcgccgcg ctccacgccc aactcgcagt cgcaggactc 1321 gtcgaacggc aggaacagct cgctgaccag ggaggccagc gtggacacat tggcgtccaa 1381 cctcgccgcc ttgtgtgccg tgaatccgga cgagtatcgg gctccagtca gcatcttcgc 1441 cagcggcaat ctctgcctgc cgtatctgtc gctgccgtac atggacctgc tcagcgatcc 1501 catggtgctc tcctacgtca tcggcacctc caacgtgctg ttccagcaga agcgtcagct 1561 ggccgacgtc ctggtggaca tcgaggcggc caacctggat gcccacgatc cggagctcag 1621 gcgccagctg gtgctgagca ccgaggacct gcgctacatg gactacatca tgaagcacgt 1681 gcagtcgccg aaggaggatg ccgagggcag cgagtactgg attcgggagc agttccaggg 1741 ctacatcctg gccctcctgc gcactgcggt ggctccagat gccacggcca aggaaaacga 1801 tcacttcaat gcgcacttca tggccgcctt caagcgcacc cagtgcttcc aggagtggta 1861 cgacgtgagg cccgagccag agttcttcga tgccctgccc actggtcatc cctttgccgg 1921 cactttgtcc gtggcggaca tgaagctaaa gctggcgcaa accatgcaga acagcgagag 1981 cgggcgaaag atcaaccagg cggtgaacac gacgagtcgg gcggtgggcg gtgccatctc 2041 gcaggccaag ggcgccttct ccagctggtg gtcatccata acgacggccc cgccaaatgc 2101 cagcgctgcg cccgcgacag gcgccaatgg ccaggagggc gacgcgggcg agggagctgc 2161 cgcaagccaa gagatctcag ttacattcca gaaccacaag gacgccgagg acgtcagcat 2221 ccacctggcc ggccaggaag aggcgcacga gtcgcatgag tcgcacaatg ccagctgcga 2281 gcagccgcag ggcattgtgg agatcggacg cgaggcggag ctgttggaca aggccgatcg 2341 gcagccggag gaagaggagg ccaagatctc ggccattcgg cccggttgtg gcggcgatgt 2401 ggccacctcc gccgtggagc gcagcagcgg cgatgtcttc atcgtctgag gacgtcggac 2461 gtcggcacta acgagcattg tataaaatcg cactaagcta aatgataatt atttattacg 2521 caacatattg tctcagtctc aacgttgaat ttatatcctc gtactcgtac tcaccccttt 2581 gtacacctat attttagagc cagttgactt gtggcacaga gaattgtatg gacaatttga 2641 gaccatattc attagttgca caatctctaa acaggaaaac tgatttgttg ttttgatttg 2701 ttattaaaat ccacactttt gtctatatag agtatgtatg gtaaactctt gaagattcca 2761 aataaattgt gaaaaataga agcgtaggga ttacaatcta tggacaattt gagaccatat 2821 tcattagttt cacaatctct aaacaggaaa actgatttgt tgttttgatt tgttattaaa 2881 atccacactt ttgtctatat agtgtatgta tagtaaagat tccaaataaa ttgttagttt 2941 atgatttagt taagtggtta gttcttttgc ctaaaacatt ttagaatatg gcttataatt 3001 gtcacattat tcctttccct aacacaagtc gattccgctc taatccaaac aaaattggcc 3061 aaaagataat atcgtttaat atttattatg tacgcctacg tttaagttgt ccttgccgtc 3121 tccacccacc actcagtgta tatgtgtaac catgtaaagc taaaccgttc caagtgcaat 3181 ttgtaatcca aaaaggcagc ggagatccgt aacaaaacca taaaccgtgt ggcaataaag 3241 aacctaaaga aatttaccta atccacaata aatacatttc acaaaaca