PREDICTED: Drosophila takahashii Troponin T, skeletal muscle (up),

LOCUS       XM_017155300            1711 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X12, mRNA.
ACCESSION   XM_017155300
VERSION     XM_017155300.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155300.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1711
                     /gene="up"
                     /note="Troponin T, skeletal muscle; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108066684"
     CDS             171..1358
                     /gene="up"
                     /codon_start=1
                     /product="troponin T, skeletal muscle isoform X12"
                     /protein_id="XP_017010789.1"
                     /db_xref="GeneID:108066684"
                     /translation="MSDDEEYTSEEEEVVEETREETKPPQTPAEGEGDPEFIKRQDQK
                     RSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEEERR
                     VREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKDAGLGLSSAA
                     MERNKTKEQLEEEKKISLSFRIKPLAIEGFGESKLREKAQELWELIVKLETEKYDLEE
                     RQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYD
                     DKKKLFEGGWDAISKDSSEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPEGE
                     EDAKADEDIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE
                     EEE"
     misc_feature    <282..>902
                     /gene="up"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
     misc_feature    630..>863
                     /gene="up"
                     /note="Region: Troponin; pfam00992"
                     /db_xref="CDD:460018"
     polyA_site      1711
                     /gene="up"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggcttttc cgcgaacgcg accaaaaatt ctttaacata acgtgtagca gcgcttttca
       61 tcgtcagtct gtttagtcga accgcagcat tcgctcctac gacgtcagct gctcggactt
      121 caattcaatt tgtttttctc cctaagtttt ttcaacccta aaccgtagcc atgtccgacg
      181 atgaagagta cacctccgag gaggaggagg ttgtcgagga gacccgcgag gagacaaaac
      241 cacctcagac accagccgaa ggagagggcg acccagagtt catcaagcgt caggaccaga
      301 agcgctccga cctcgatgat cagctgaaag aatacatcac cgagtggcgc aaacagagat
      361 ccaaggagga ggatgagctg aagaagctga aggagaagca ggccaagcgc aaggtcaccc
      421 gcgccgagga ggagcaaaag atggcccagc gcaagaagga ggaggaggag cgccgtgtcc
      481 gcgaggccga ggagaagaag cagcgcgaga tcgaggagaa gcgcatgcgc ctcgaggagg
      541 ccgagaagaa gcgccaggct atgctgcagg ccatgaagga caaggacaag aagggcccca
      601 acttcaccat tgccaagaag gatgcaggct tgggactctc gtccgccgcc atggaacgca
      661 acaagactaa ggaacagttg gaggaggaga agaagatctc gctgtcgttc cgcatcaagc
      721 ccttggccat cgaaggattc ggcgagtcta agctgcgcga gaaggcccag gagctgtggg
      781 agctcattgt caaattggaa actgagaagt atgacttgga agaaaggcag aaacgtcagg
      841 actacgattt gaaagagttg aaggaaagac agaagcaaca gctcaggcac aaagccttga
      901 agaagggtct cgacccggaa gctttgactg gcaaataccc gcccaagatt caagtcgcct
      961 ccaagtatga gcgacgtgtg gatacccgct catatgacga caagaagaag ctcttcgagg
     1021 gtggctggga cgccatctcc aaggactcga gcgagaagat ctggaacgag aagaaggagc
     1081 aatacaccgg ccgtcaaaaa tccaaactgc caaagtggtt cggcgagcga ccaggcaaga
     1141 aggccggtga gcccgagaca cccgagggcg aggaggacgc caaggccgat gaggacatcg
     1201 tcgaggatga tgaggaggtc gaggaggagg tcgtcgagga ggaggatgag gaggccgagg
     1261 aggatgagga ggaagaggag gaggaagagg aggaggaaga ggaagaggag gaggaagagg
     1321 aggaggagga agaagaggaa gaggaggagg aggaatagac caatccacac tctgggcccg
     1381 ccctcgcgca ccactttcct tcaccacttt tcgtaaaaac aaacactcta catttaaata
     1441 ccaaagccaa acaattttaa taaaagtaaa agaatgaact aaatagttat gatatatctt
     1501 agcttattcg cccaacaact tgctattcaa aatcaaaaac tcaacatctt ttttattgaa
     1561 tcgagaaatg taagatttct ttaaaataaa acatcaaaac caacaccaac taagtcaaat
     1621 actagcaaaa ccaaaaacaa gcaaccaaaa aaaaaaataa gagaaacaat caagatatta
     1681 aagtgtgtta tggcatcata tctatgaaca a