PREDICTED: Drosophila takahashii Troponin T, skeletal muscle (up),

LOCUS       XM_017155297            1648 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X10, mRNA.
ACCESSION   XM_017155297
VERSION     XM_017155297.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155297.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1648
                     /gene="up"
                     /note="Troponin T, skeletal muscle; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108066684"
     CDS             171..1295
                     /gene="up"
                     /codon_start=1
                     /product="troponin T, skeletal muscle isoform X10"
                     /protein_id="XP_017010786.1"
                     /db_xref="GeneID:108066684"
                     /translation="MSDDEEYTGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKE
                     EDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEA
                     EKKRQAMLQAMKDKDKKGPNFTIAKKDAGVLGLSSAAMERNKTKEQLEEEKKISLSFR
                     IKPLAIEGFGESKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLR
                     HKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLFEGGYNTVYAETLEKT
                     WQERQERFTQRTKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVEDDEEVEEEVV
                     EEEDEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE"
     misc_feature    <216..>839
                     /gene="up"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
     misc_feature    567..>800
                     /gene="up"
                     /note="Region: Troponin; pfam00992"
                     /db_xref="CDD:460018"
     polyA_site      1648
                     /gene="up"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggcttttc cgcgaacgcg accaaaaatt ctttaacata acgtgtagca gcgcttttca
       61 tcgtcagtct gtttagtcga accgcagcat tcgctcctac gacgtcagct gctcggactt
      121 caattcaatt tgtttttctc cctaagtttt ttcaacccta aaccgtagcc atgtccgacg
      181 atgaagagta cacaggagag ggcgacccag agttcatcaa gcgtcaggac cagaagcgct
      241 ccgacctcga tgatcagctg aaagaataca tcaccgagtg gcgcaaacag agatccaagg
      301 aggaggatga gctgaagaag ctgaaggaga agcaggccaa gcgcaaggtc acccgcgccg
      361 aggaggagca aaagatggcc cagcgcaaga aggaggagga ggagcgccgt gtccgcgagg
      421 ccgaggagaa gaagcagcgc gagatcgagg agaagcgcat gcgcctcgag gaggccgaga
      481 agaagcgcca ggctatgctg caggccatga aggacaagga caagaagggc cccaacttca
      541 ccattgccaa gaaggatgca ggcgtgttgg gactctcgtc cgccgccatg gaacgcaaca
      601 agactaagga acagttggag gaggagaaga agatctcgct gtcgttccgc atcaagccct
      661 tggccatcga aggattcggc gagtctaagc tgcgcgagaa ggcccaggag ctgtgggagc
      721 tcattgtcaa attggaaact gagaagtatg acttggaaga aaggcagaaa cgtcaggact
      781 acgatttgaa agagttgaag gaaagacaga agcaacagct caggcacaaa gccttgaaga
      841 agggtctcga cccggaagct ttgactggca aatacccgcc caagattcaa gtcgcctcca
      901 agtatgagcg acgtgtggat acccgctcat atgacgacaa gaagaagctc ttcgagggtg
      961 gctataatac ggtctatgcg gaaaccttag aaaagacctg gcaagaaaga caggaaagat
     1021 ttactcagcg cacaaaatcc aaactgccaa agtggttcgg cgagcgacca ggcaagaagg
     1081 ccggtgagcc cgagacaccc gagggcgagg aggacgccaa ggccgatgag gacatcgtcg
     1141 aggatgatga ggaggtcgag gaggaggtcg tcgaggagga ggatgaggag gccgaggagg
     1201 atgaggagga agaggaggag gaagaggagg aggaagagga agaggaggag gaagaggagg
     1261 aggaggaaga agaggaagag gaggaggagg aatagaccaa tccacactct gggcccgccc
     1321 tcgcgcacca ctttccttca ccacttttcg taaaaacaaa cactctacat ttaaatacca
     1381 aagccaaaca attttaataa aagtaaaaga atgaactaaa tagttatgat atatcttagc
     1441 ttattcgccc aacaacttgc tattcaaaat caaaaactca acatcttttt tattgaatcg
     1501 agaaatgtaa gatttcttta aaataaaaca tcaaaaccaa caccaactaa gtcaaatact
     1561 agcaaaacca aaaacaagca accaaaaaaa aaaataagag aaacaatcaa gatattaaag
     1621 tgtgttatgg catcatatct atgaacaa