PREDICTED: Drosophila takahashii Troponin T, skeletal muscle (up),

LOCUS       XM_017155296            1647 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X9, mRNA.
ACCESSION   XM_017155296
VERSION     XM_017155296.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155296.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1647
                     /gene="up"
                     /note="Troponin T, skeletal muscle; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108066684"
     CDS             170..1294
                     /gene="up"
                     /codon_start=1
                     /product="troponin T, skeletal muscle isoform X9"
                     /protein_id="XP_017010785.1"
                     /db_xref="GeneID:108066684"
                     /translation="MSDDEEYTGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKE
                     EDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEA
                     EKKRQAMLQAMKDKDKKGPNFTIAKKDAGVLGLSSAAMERNKTKEQLEEEKKISLSFR
                     IKPLAIEGFGESKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLR
                     HKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLFEGGWDAISKDSSEKI
                     WNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVEDDEEVEEEVV
                     EEEDEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE"
     misc_feature    <215..>838
                     /gene="up"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
     misc_feature    566..>799
                     /gene="up"
                     /note="Region: Troponin; pfam00992"
                     /db_xref="CDD:460018"
     polyA_site      1647
                     /gene="up"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tggcttttcc gcgaacgcga ccaaaaattc tttaacataa cgtgtagcag cgcttttcat
       61 cgtcagtctg tttagtcgaa ccgcagcatt cgctcctacg acgtcagctg ctcggacttc
      121 aattcaattt gtttttctcc ctaagttttt tcaaccctaa accgtagcca tgtccgacga
      181 tgaagagtac acaggagagg gcgacccaga gttcatcaag cgtcaggacc agaagcgctc
      241 cgacctcgat gatcagctga aagaatacat caccgagtgg cgcaaacaga gatccaagga
      301 ggaggatgag ctgaagaagc tgaaggagaa gcaggccaag cgcaaggtca cccgcgccga
      361 ggaggagcaa aagatggccc agcgcaagaa ggaggaggag gagcgccgtg tccgcgaggc
      421 cgaggagaag aagcagcgcg agatcgagga gaagcgcatg cgcctcgagg aggccgagaa
      481 gaagcgccag gctatgctgc aggccatgaa ggacaaggac aagaagggcc ccaacttcac
      541 cattgccaag aaggatgcag gcgtgttggg actctcgtcc gccgccatgg aacgcaacaa
      601 gactaaggaa cagttggagg aggagaagaa gatctcgctg tcgttccgca tcaagccctt
      661 ggccatcgaa ggattcggcg agtctaagct gcgcgagaag gcccaggagc tgtgggagct
      721 cattgtcaaa ttggaaactg agaagtatga cttggaagaa aggcagaaac gtcaggacta
      781 cgatttgaaa gagttgaagg aaagacagaa gcaacagctc aggcacaaag ccttgaagaa
      841 gggtctcgac ccggaagctt tgactggcaa atacccgccc aagattcaag tcgcctccaa
      901 gtatgagcga cgtgtggata cccgctcata tgacgacaag aagaagctct tcgagggtgg
      961 ctgggacgcc atctccaagg actcgagcga gaagatctgg aacgagaaga aggagcaata
     1021 caccggccgt caaaaatcca aactgccaaa gtggttcggc gagcgaccag gcaagaaggc
     1081 cggtgagccc gagacacccg agggcgagga ggacgccaag gccgatgagg acatcgtcga
     1141 ggatgatgag gaggtcgagg aggaggtcgt cgaggaggag gatgaggagg ccgaggagga
     1201 tgaggaggaa gaggaggagg aagaggagga ggaagaggaa gaggaggagg aagaggagga
     1261 ggaggaagaa gaggaagagg aggaggagga atagaccaat ccacactctg ggcccgccct
     1321 cgcgcaccac tttccttcac cacttttcgt aaaaacaaac actctacatt taaataccaa
     1381 agccaaacaa ttttaataaa agtaaaagaa tgaactaaat agttatgata tatcttagct
     1441 tattcgccca acaacttgct attcaaaatc aaaaactcaa catctttttt attgaatcga
     1501 gaaatgtaag atttctttaa aataaaacat caaaaccaac accaactaag tcaaatacta
     1561 gcaaaaccaa aaacaagcaa ccaaaaaaaa aaataagaga aacaatcaag atattaaagt
     1621 gtgttatggc atcatatcta tgaacaa