PREDICTED: Drosophila takahashii Troponin T, skeletal muscle (up),

LOCUS       XM_017155293            1690 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X8, mRNA.
ACCESSION   XM_017155293
VERSION     XM_017155293.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155293.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1690
                     /gene="up"
                     /note="Troponin T, skeletal muscle; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108066684"
     CDS             171..1337
                     /gene="up"
                     /codon_start=1
                     /product="troponin T, skeletal muscle isoform X8"
                     /protein_id="XP_017010782.1"
                     /db_xref="GeneID:108066684"
                     /translation="MSDDEEYTSEEEEVVEETREETGEGDPEFIKRQDQKRSDLDDQL
                     KEYITEWRKQRSKEEDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEEERRVREAEEKK
                     QREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKDAGVLGLSSAAMERNKTK
                     EQLEEEKKISLSFRIKPLAIEGFGESKLREKAQELWELIVKLETEKYDLEERQKRQDY
                     DLKELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLFE
                     GGWDAISKDSSEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADE
                     DIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE"
     misc_feature    <324..>950
                     /gene="up"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    609..>842
                     /gene="up"
                     /note="Region: Troponin; pfam00992"
                     /db_xref="CDD:460018"
     polyA_site      1690
                     /gene="up"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggcttttc cgcgaacgcg accaaaaatt ctttaacata acgtgtagca gcgcttttca
       61 tcgtcagtct gtttagtcga accgcagcat tcgctcctac gacgtcagct gctcggactt
      121 caattcaatt tgtttttctc cctaagtttt ttcaacccta aaccgtagcc atgtccgacg
      181 atgaagagta cacctccgag gaggaggagg ttgtcgagga gacccgcgag gagacaggag
      241 agggcgaccc agagttcatc aagcgtcagg accagaagcg ctccgacctc gatgatcagc
      301 tgaaagaata catcaccgag tggcgcaaac agagatccaa ggaggaggat gagctgaaga
      361 agctgaagga gaagcaggcc aagcgcaagg tcacccgcgc cgaggaggag caaaagatgg
      421 cccagcgcaa gaaggaggag gaggagcgcc gtgtccgcga ggccgaggag aagaagcagc
      481 gcgagatcga ggagaagcgc atgcgcctcg aggaggccga gaagaagcgc caggctatgc
      541 tgcaggccat gaaggacaag gacaagaagg gccccaactt caccattgcc aagaaggatg
      601 caggcgtgtt gggactctcg tccgccgcca tggaacgcaa caagactaag gaacagttgg
      661 aggaggagaa gaagatctcg ctgtcgttcc gcatcaagcc cttggccatc gaaggattcg
      721 gcgagtctaa gctgcgcgag aaggcccagg agctgtggga gctcattgtc aaattggaaa
      781 ctgagaagta tgacttggaa gaaaggcaga aacgtcagga ctacgatttg aaagagttga
      841 aggaaagaca gaagcaacag ctcaggcaca aagccttgaa gaagggtctc gacccggaag
      901 ctttgactgg caaatacccg cccaagattc aagtcgcctc caagtatgag cgacgtgtgg
      961 atacccgctc atatgacgac aagaagaagc tcttcgaggg tggctgggac gccatctcca
     1021 aggactcgag cgagaagatc tggaacgaga agaaggagca atacaccggc cgtcaaaaat
     1081 ccaaactgcc aaagtggttc ggcgagcgac caggcaagaa ggccggtgag cccgagacac
     1141 ccgagggcga ggaggacgcc aaggccgatg aggacatcgt cgaggatgat gaggaggtcg
     1201 aggaggaggt cgtcgaggag gaggatgagg aggccgagga ggatgaggag gaagaggagg
     1261 aggaagagga ggaggaagag gaagaggagg aggaagagga ggaggaggaa gaagaggaag
     1321 aggaggagga ggaatagacc aatccacact ctgggcccgc cctcgcgcac cactttcctt
     1381 caccactttt cgtaaaaaca aacactctac atttaaatac caaagccaaa caattttaat
     1441 aaaagtaaaa gaatgaacta aatagttatg atatatctta gcttattcgc ccaacaactt
     1501 gctattcaaa atcaaaaact caacatcttt tttattgaat cgagaaatgt aagatttctt
     1561 taaaataaaa catcaaaacc aacaccaact aagtcaaata ctagcaaaac caaaaacaag
     1621 caaccaaaaa aaaaaataag agaaacaatc aagatattaa agtgtgttat ggcatcatat
     1681 ctatgaacaa