PREDICTED: Drosophila takahashii Troponin T, skeletal muscle (up),

LOCUS       XM_017155291            1692 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X6, mRNA.
ACCESSION   XM_017155291
VERSION     XM_017155291.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155291.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1692
                     /gene="up"
                     /note="Troponin T, skeletal muscle; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108066684"
     CDS             170..1339
                     /gene="up"
                     /codon_start=1
                     /product="troponin T, skeletal muscle isoform X6"
                     /protein_id="XP_017010780.1"
                     /db_xref="GeneID:108066684"
                     /translation="MSDDEEYTSSEEEEVVEETREETGEGDPEFIKRQDQKRSDLDDQ
                     LKEYITEWRKQRSKEEDELKKLKEKQAKRKVTRAEEEQKMAQRKKEEEERRVREAEEK
                     KQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPNFTIAKKDAGVLGLSSAAMERNKT
                     KEQLEEEKKISLSFRIKPLAIEGFGESKLREKAQELWELIVKLETEKYDLEERQKRQD
                     YDLKELKERQKQQLRHKALKKGLDPEALTGKYPPKIQVASKYERRVDTRSYDDKKKLF
                     EGGWDAISKDSSEKIWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKAD
                     EDIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE"
     misc_feature    <260..>883
                     /gene="up"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; Region:
                     Smc; COG1196"
                     /db_xref="CDD:440809"
     misc_feature    611..>844
                     /gene="up"
                     /note="Region: Troponin; pfam00992"
                     /db_xref="CDD:460018"
     polyA_site      1692
                     /gene="up"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tggcttttcc gcgaacgcga ccaaaaattc tttaacataa cgtgtagcag cgcttttcat
       61 cgtcagtctg tttagtcgaa ccgcagcatt cgctcctacg acgtcagctg ctcggacttc
      121 aattcaattt gtttttctcc ctaagttttt tcaaccctaa accgtagcca tgtccgacga
      181 tgaagagtac accagctccg aggaggagga ggttgtcgag gagacccgcg aggagacagg
      241 agagggcgac ccagagttca tcaagcgtca ggaccagaag cgctccgacc tcgatgatca
      301 gctgaaagaa tacatcaccg agtggcgcaa acagagatcc aaggaggagg atgagctgaa
      361 gaagctgaag gagaagcagg ccaagcgcaa ggtcacccgc gccgaggagg agcaaaagat
      421 ggcccagcgc aagaaggagg aggaggagcg ccgtgtccgc gaggccgagg agaagaagca
      481 gcgcgagatc gaggagaagc gcatgcgcct cgaggaggcc gagaagaagc gccaggctat
      541 gctgcaggcc atgaaggaca aggacaagaa gggccccaac ttcaccattg ccaagaagga
      601 tgcaggcgtg ttgggactct cgtccgccgc catggaacgc aacaagacta aggaacagtt
      661 ggaggaggag aagaagatct cgctgtcgtt ccgcatcaag cccttggcca tcgaaggatt
      721 cggcgagtct aagctgcgcg agaaggccca ggagctgtgg gagctcattg tcaaattgga
      781 aactgagaag tatgacttgg aagaaaggca gaaacgtcag gactacgatt tgaaagagtt
      841 gaaggaaaga cagaagcaac agctcaggca caaagccttg aagaagggtc tcgacccgga
      901 agctttgact ggcaaatacc cgcccaagat tcaagtcgcc tccaagtatg agcgacgtgt
      961 ggatacccgc tcatatgacg acaagaagaa gctcttcgag ggtggctggg acgccatctc
     1021 caaggactcg agcgagaaga tctggaacga gaagaaggag caatacaccg gccgtcaaaa
     1081 atccaaactg ccaaagtggt tcggcgagcg accaggcaag aaggccggtg agcccgagac
     1141 acccgagggc gaggaggacg ccaaggccga tgaggacatc gtcgaggatg atgaggaggt
     1201 cgaggaggag gtcgtcgagg aggaggatga ggaggccgag gaggatgagg aggaagagga
     1261 ggaggaagag gaggaggaag aggaagagga ggaggaagag gaggaggagg aagaagagga
     1321 agaggaggag gaggaataga ccaatccaca ctctgggccc gccctcgcgc accactttcc
     1381 ttcaccactt ttcgtaaaaa caaacactct acatttaaat accaaagcca aacaatttta
     1441 ataaaagtaa aagaatgaac taaatagtta tgatatatct tagcttattc gcccaacaac
     1501 ttgctattca aaatcaaaaa ctcaacatct tttttattga atcgagaaat gtaagatttc
     1561 tttaaaataa aacatcaaaa ccaacaccaa ctaagtcaaa tactagcaaa accaaaaaca
     1621 agcaaccaaa aaaaaaaata agagaaacaa tcaagatatt aaagtgtgtt atggcatcat
     1681 atctatgaac aa