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PREDICTED: Drosophila takahashii Pinkman (pkm), mRNA.


LOCUS       XM_017155275            2061 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017155275
VERSION     XM_017155275.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017155275.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2061
                     /gene="pkm"
                     /note="Pinkman; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108066674"
     CDS             7..1794
                     /gene="pkm"
                     /codon_start=1
                     /product="uncharacterized protein pkm"
                     /protein_id="XP_017010764.2"
                     /db_xref="GeneID:108066674"
                     /translation="MEQPGENQLEAEEDPEKEQLTQEETDQEKDLQEYIENILHGDLE
                     RQGDEERPQKNSPENENENEENPAVQEELSGEESQRESILAKNQEILDEEPVEEEVLE
                     KEELKEREELEEDTPGDQHSEEELKGKPEESVKREEELTEICENKERLTDTPESVENQ
                     EDHLTPQQNQENQESKPEEDLPNEQVTQFLRQLVSREWPEVGALPELRLQRASAKGDN
                     YLGVVWRMQVAPGDSQRSLVVKLPPQNRVRRKQFFARPCFLRETAAYEEFLPLAEMIQ
                     EKWSIPAEDRFRQHALCLGTRQDEPNECIVLEDLACSGFSLHNRFHDLSLEQVRQVIR
                     TYAKLHAISLAAKRQFPDRMHKLQLLVDIFEQRREDHALGVYFENLKGSALSALLSTP
                     ADDRYRRRLESYFSRGSYFELLLPLVGGSNCEPFAVICHGDCWNNNILYKSSEGGVLE
                     DVRLIDWQLMRYASPVTDLAYFLFTCTSRDFRQRHLKNILEDYYEELGVQLKRLGEQL
                     DQLLPRSAFDEQVATKAPVGLLLAMMVLPIVTMQGQDVPDLQAISERIEAGATTDLQG
                     AGFLGAGNEATFKQRMREVILDCVDFDYI"
     misc_feature    649..1524
                     /gene="pkm"
                     /note="Ecdysteroid kinase-like family; Region: EcKL;
                     pfam02958"
                     /db_xref="CDD:397213"
     polyA_site      2061
                     /gene="pkm"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtgcaatgg agcagcccgg cgagaaccag ctggaggctg aggaggatcc agagaaggag
       61 caacttactc aagaggaaac cgaccaagag aaggacctgc aagaatatat agaaaatatt
      121 ctgcatggtg atcttgaacg acaaggcgat gaagaacgac cgcagaagaa tagtccggag
      181 aatgagaatg agaatgagga gaatcctgcg gtacaggaag aattgagcgg agaagaatct
      241 caacgggaaa gtattttagc gaaaaatcaa gaaatcctgg acgaggaacc tgtggaggaa
      301 gaagtcttgg aaaaagagga gcttaaagaa agagaagagc tcgaagaaga tactcccgga
      361 gatcagcatt cagaagaaga attaaaaggt aaaccggaag agtctgtgaa aagggaagaa
      421 gagcttacgg aaatctgcga gaacaaggag cggctcaccg atactcctga aagtgtggag
      481 aatcaagagg atcacttgac accgcagcag aatcaggaga atcaggagtc gaagcccgaa
      541 gaggatctgc ccaacgaaca ggtgacccag ttcctccgcc aactggtcag ccgagagtgg
      601 cccgaagtgg gcgcccttcc ggagctccgt ttgcagaggg ccagtgccaa gggtgacaac
      661 tacctgggcg tcgtctggcg gatgcaggtg gctcccggcg actcgcagcg cagcctggtg
      721 gtgaagcttc cgccgcagaa tcgcgtgcgg cgcaagcaat tcttcgcacg tccctgcttt
      781 ctgcgggaga cggcggccta cgaggagttc ctgccgctgg ccgagatgat tcaggagaag
      841 tggagcattc ccgccgagga tcgcttccgg cagcacgccc tttgtctggg cacgcggcag
      901 gacgagccga acgaatgcat cgtcctggag gatctcgcct gctcgggctt ctcgctgcac
      961 aatcgcttcc atgacttgtc cctggagcag gtgcgtcagg tgatccgcac ctatgccaag
     1021 ctacatgcca tatcgctggc tgcgaagcgt cagtttcccg accggatgca caagctccag
     1081 ctgctggtgg acatctttga gcagcggcgc gaggatcatg cgttgggtgt ctacttcgag
     1141 aatctcaagg gcagtgccct ctccgcgctg ctctccacgc cggcggatga tcgctaccgg
     1201 aggcgcctgg agtcgtactt ctcgcgggga tcgtacttcg agctgctgct gcccctggtc
     1261 ggcggctcca attgcgaacc cttcgccgtc atctgccacg gcgattgctg gaacaataat
     1321 atcctgtaca aaagctcaga gggcggagtt ctggaggacg ttcgcctgat cgactggcaa
     1381 ctgatgcgat acgcctcccc ggtcaccgat ttggcctact tcctcttcac ctgcacctcg
     1441 cgcgacttcc gccagcggca cctcaaaaat atactagagg attactacga ggagctgggc
     1501 gtgcagctaa aaagattggg cgagcagttg gatcaacttc ttccccgaag cgcattcgac
     1561 gaacaggtgg ccaccaaggc tcctgtgggc ctgctcctcg ccatgatggt tctgcccatt
     1621 gtgaccatgc agggccagga tgtgcccgac ctccaggcga ttagcgagcg gatcgaggcc
     1681 ggagccacca cggatctcca gggcgccgga ttcctgggcg cgggcaacga ggcaaccttc
     1741 aaacagcgca tgcgcgaggt gatcctcgac tgcgtggact ttgactacat ataggaatat
     1801 gcaatggaaa ttctactata gaattcctaa tagtataata ttaataaatg ctttaattcg
     1861 ccagatgctt tatggtatag tttttagttt accaattctt ttttgtcaac tgaaaaagat
     1921 tttgaaattt atgttattat cctgcaggct aaggtatata tgacatttga aagacgggac
     1981 atttttggca tacttctcga aattccctac aaagaataaa ggttttttaa ttaaaactgc
     2041 aatttgataa attaaaaata a