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LOCUS XM_017154342 2040 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017154342 VERSION XM_017154342.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017154342.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2040 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2040 /gene="shop" /note="sulfite oxidase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108066017" CDS 265..1974 /gene="shop" /codon_start=1 /product="sulfite oxidase, mitochondrial" /protein_id="XP_017009831.2" /db_xref="GeneID:108066017" /translation="MRLLRRSWAGLMHHQQRRLLVTTSNGGREEQQQQQQHKWSSPGS RTEQMIYAAFWAGGLTLGYHWLTHRSHHVLLEEQKEDEQEALARLWHVTLRKELPTYK AKQVEQHNCPENRIWVTYGLGVYDVTDFAENHPGGDKILMAAGSAIDPFWAIYQQHNT LEVLELLEGFRIGNLEGELVATVDDELGSPWSQEPQRHALLKPASKRPFNAEPPIGLL AEQFYTPNELFYVRNHLPVPVISAEDYELEIDGGEGQEKTLSLAGIKALPKHSVTAAI MCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDVLRAQGVQPDESKHVIFEGA DLDPTSHPYGASIPLAKALDPRGDVILAYEMNDETLSRDHGYPIRVIVPGTVGARNVK WLTRIVVADRESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSAICAPQSGAR VKVDEDDGEEGGKYITVKGYAWSGGGRKIVRVDLTNDEGASWHVAELEQEDIPDGRHY GWSLWTARLPVSEEQRKAGDVEIWAKAVDSAYNVQPEKFEHIWNLRGVLANAYHKVKV KIV" misc_feature 571..789 /gene="shop" /note="Cytochrome b5-like Heme/Steroid binding domain; Region: Cyt-b5; pfam00173" /db_xref="CDD:459698" misc_feature 865..1968 /gene="shop" /note="molybdopterin binding domain of sulfite oxidase (SO). SO catalyzes the terminal reaction in the oxidative degradation of the sulfur-containing amino acids cysteine and methionine. Common features of all known members of the sulfite oxidase (SO) family of...; Region: eukary_SO_Moco; cd02111" /db_xref="CDD:239029" misc_feature order(949..954,958..960,964..966,1096..1098,1291..1293, 1384..1386,1399..1401,1423..1425,1432..1434,1438..1443) /gene="shop" /note="Moco binding site [active]" /db_xref="CDD:239029" misc_feature 1096..1098 /gene="shop" /note="metal coordination site [ion binding]; other site" /db_xref="CDD:239029" misc_feature order(1573..1575,1693..1695,1705..1707,1711..1713, 1738..1740,1744..1746,1864..1866,1879..1887,1897..1899, 1945..1947) /gene="shop" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:239029" polyA_site 2040 /gene="shop" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tccgttgtca acaaggcggc tggtcggctg gtaaacaacc gaattagcgc tatttcagat 61 tgcttatcaa taaaaccaac ccagctgggg ggccagaggc tgcaggggcc aatgtcgcca 121 gtggacaaac agaagacatc atcatatcac taataaaagc acatttaccg gagcggcaag 181 aagcagagtt tgaagaagct tggagattgg attggatttg attcgaaaca agtgatttcc 241 cggtggtttt gcggttacat aatcatgcgt ttgctcaggc gcagctgggc gggattaatg 301 caccaccagc agcggcgtct tctagtgacc accagcaatg gaggaaggga agaacagcag 361 cagcagcagc agcacaagtg gagttccccg ggcagcagaa cagagcaaat gatctatgcc 421 gccttctggg caggtggctt gaccctcggc taccactggc tgacccatag aagccaccat 481 gtgctcctcg aggagcaaaa ggaggacgaa caggaggcac tggctagact ttggcacgtg 541 actttaagaa aggaactgcc cacctacaag gcgaagcaag tggagcagca caattgccca 601 gagaatcgca tttgggtgac ctacggcctg ggcgtttacg atgtgacgga ctttgccgag 661 aatcatccgg gtggcgataa gatcctgatg gcagccggca gtgccatcga tcccttttgg 721 gccatctacc agcagcacaa tacgctggag gttctggagc tcctcgaagg ctttcgtatt 781 ggcaatctgg agggagaact ggtcgccact gtggacgatg agctgggctc tccgtggtcg 841 caggagccac agcgacatgc gctgcttaag cccgcctcca agaggccatt caacgcagaa 901 ccaccgattg gcctgctggc cgaacaattc tacacaccca acgaactgtt ctatgtgcgc 961 aaccatctgc cggtgccggt gatcagtgcc gaggattatg agctggagat cgacggtggc 1021 gaggggcagg agaagaccct cagtctggcg gggatcaagg ctctgcccaa gcactccgtg 1081 acggcggcca tcatgtgcgg cggcaatcga cgctccgaga tgacaaaagt gaaggcggtg 1141 aagggtctct cgtggggagc cggtgcagtg ggcaatgcca agtggtcggg agctcgactg 1201 tgcgatgttt tgagggcgca gggagtgcaa ccggacgaaa gcaagcatgt gatcttcgag 1261 ggcgccgact tggatcccac ctcgcatccg tatggagcat cgataccgct ggccaaggcc 1321 ctggatcccc ggggagatgt catcctggcc tacgagatga atgatgagac gctgagccgg 1381 gatcatggct atcccattcg ggtgattgta cccggcacag tgggtgcgag gaatgtcaag 1441 tggctgacgc ggatcgtggt ggcggatcgg gaatcggatt cgcactggca gcagaacgac 1501 tacaagggct tcagtcccag caccgattgg gatacggtgg actttagcaa gtcggatgcc 1561 atccaggcca tgccggtgac ctcggccatc tgtgcgccgc agtcgggagc cagggtaaaa 1621 gtggatgagg atgacggcga agagggagga aaatatatca ctgtaaaggg ctacgcgtgg 1681 agcggaggcg gcaggaagat agtgcgcgtg gacctgacca acgacgaggg cgccagctgg 1741 catgtggccg aactggagca ggaggacatc ccagatggca ggcactacgg ttggtccttg 1801 tggaccgccc gtctgcccgt ctccgaggag caacgaaagg ccggcgacgt ggagatctgg 1861 gccaaggccg tcgactcggc gtacaatgtg cagccggaaa agttcgagca catttggaat 1921 ctgcgcggcg ttctggccaa tgcctatcac aaagtcaaag tgaagattgt ctaacgattg 1981 tctatagtct atctaaaata aagattggag ttagagctct gcatgaatgg attcaatgaa