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LOCUS XM_017153885 1569 bp mRNA linear INV 09-DEC-2024 (LOC108065747), mRNA. ACCESSION XM_017153885 VERSION XM_017153885.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017153885.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1569 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1569 /gene="LOC108065747" /note="uncharacterized LOC108065747; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065747" CDS 113..1393 /gene="LOC108065747" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017009374.2" /db_xref="GeneID:108065747" /translation="MGKRRSRERDQELQSSGEDGATKMSERNSAKPKKAKQKGERHSS ISSNYSPESKKSNRSSPSPDRKKQMPGRKPWESPEAQQMRSKLPTKLSEEVQKQRSKW DSPERSGSHRNSTRQRRHSRSRSRDRGERDRERERDRDRDRKRERENHLQRSGRDMER SKERRQRSPGQRQRSRSKDRQRRSPDRRLVRRSKSPRDRSHREGRDFGQGRQRNQRRD NRNRNEDEQYQWGKQGDDNAPPEDEEPVDKEKPNFGLSGALTEDTNKVNGVVVKYSEP PEARKPKRRWRLYPFKGETALPTLHIHRQSCFLVGRDRKVVDLAVDHPSCSKQHAALQ YRLVPFERDDGSHGKRVRLYLIDLESANGTFLNNKKIDGRKYYELMEKDVIKFGFSSR EYVLLHENSKEDQEDDDVHIKDEPQDAPAKVANP" misc_feature 224..>853 /gene="LOC108065747" /note="transcription termination factor Rho; Provisional; Region: PRK12678" /db_xref="CDD:237171" misc_feature 863..1309 /gene="LOC108065747" /note="forkhead associated (FHA) domain found in Smad nuclear-interacting protein 1 (SNIP1) and similar proteins; Region: FHA_SNIP1; cd22718" /db_xref="CDD:438770" misc_feature order(887..889,974..982,1079..1081) /gene="LOC108065747" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:438770" misc_feature order(1043..1051,1091..1096,1100..1102,1190..1192, 1196..1201) /gene="LOC108065747" /note="putative phosphopeptide binding site [polypeptide binding]; other site" /db_xref="CDD:438770" polyA_site 1569 /gene="LOC108065747" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatgcacact ttggtcacac tgcatcaaac agctgacggt ataaaaataa aagcgatttc 61 ttaattttta tttgcttatt gattttggga agtttacgca cttcatcctg aaatgggcaa 121 gcgacgcagc cgggagcgtg atcaggaact acaatcttcc ggtgaggatg gggccaccaa 181 aatgagcgaa cgcaactcgg ccaagccaaa gaaagccaag caaaaggggg aacgccattc 241 ctccatttcc tcaaattact cgccagaaag caaaaaatcc aatcgtagca gcccctcgcc 301 ggatagaaag aagcagatgc cgggcagaaa accgtgggaa tctccggaag cgcagcagat 361 gcgctctaaa ttgcctacga aactctcgga ggaggtacaa aagcagcgat ctaagtggga 421 tagtccggaa cgcagcggct cccatcgcaa cagcacaagg cagcgccggc acagtcgcag 481 tcgctccagg gatcgtgggg agcgggatag agaacgggag cgggacagag atcgcgatcg 541 gaaacgggag agggagaatc acttgcagcg cagcggaagg gatatggagc gcagcaagga 601 gcgacgtcag cgatccccag ggcagcggca gcgatcccgg agcaaggatc gccagcggag 661 gtccccggat aggagacttg ttcgccgcag taaaagtccc cgcgatcgat cccaccgcga 721 agggcgcgac tttggccaag gacgccagcg aaaccagcgt cgtgacaatc gtaacaggaa 781 tgaggacgag cagtaccagt ggggcaagca aggtgacgat aatgcgccgc ctgaggacga 841 ggagccagtg gacaaggaga aacccaactt cggtctaagt ggcgccctca ccgaagacac 901 caacaaggtg aatggcgtag tggttaaata ctcagagcct ccagaggccc gcaaaccgaa 961 gcgccgctgg aggctgtacc cgttcaaggg cgaaacggcg ttgcccacgc tgcacattca 1021 tcggcagagc tgcttcctgg ttgggcgaga tcgcaaagta gttgacctgg cggtggatca 1081 tcccagttgt tccaaacagc atgccgctct gcagtaccga ctggtgccct ttgagcggga 1141 cgatggtagt catgggaaac gcgtgcggtt gtaccttatc gatctggagt cagccaacgg 1201 cacgtttctg aacaacaaaa agatcgatgg cagaaagtac tacgagctaa tggagaagga 1261 cgtcatcaag ttcggcttca gttcgcgcga gtatgtgctt ctacacgaga acagcaagga 1321 agaccaggag gacgacgatg tacatatcaa ggatgagccg caagatgctc ctgctaaagt 1381 ggccaatcct tagattgcat acgtgttcct gctttcgatt gattggttaa ttttgttaag 1441 ctaacttcag acttttaatg tatttcgttt tgatgtccaa atcttgggcg agagatatgt 1501 atgtaaaaac tcttacggaa cacggttttg cgtgttcact gccaacgaaa aaataaattt 1561 taactcgaa