PREDICTED: Drosophila takahashii tiny tim 50 (ttm50), mRNA.

LOCUS       XM_017153882            1678 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017153882
VERSION     XM_017153882.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153882.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1678
                     /gene="ttm50"
                     /note="tiny tim 50; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:108065745"
     CDS             149..1357
                     /gene="ttm50"
                     /codon_start=1
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM50-C"
                     /protein_id="XP_017009371.2"
                     /db_xref="GeneID:108065745"
                     /translation="MTMAPATVLQMLRGLSTPRVLSQIHQHGALGNHLTRHHHRLATS
                     TTLPLPSSLLLHTARGYSSTTKQENAAGGSSSSSAPLLAKLFPQTAPEVDSSAEQERQ
                     KREEEEAKENERAWKRMKLGFAIFGGGGVAAGFWAVYEFGKPEVDPNGQTIEDEFTHK
                     PLVQQYLQRMWKSIHYYQRMIQEPSRAKLLPDPLKPPYVQPRYTLVLEMKDVLVHPDW
                     TYQTGWRFKKRPGVDHFLAECAKEFEIVVFTAEQGMTVFPILDALDPNGYIMYRLVRD
                     ATHFVDGHHVKNLDNLNRDLKKVIVIDWDANATKMHPDNTFGLARWHGNDDDGQLLDL
                     IAFLKIIAQNNVDDVREVLHYYRQFDDPISQFRENQRRLAEQMQEAERVEQSKTKPMV
                     KQWSRSILGR"
     misc_feature    749..1135
                     /gene="ttm50"
                     /note="catalytic domain of ctd-like phosphatases; Region:
                     CPDc; smart00577"
                     /db_xref="CDD:214729"
     misc_feature    order(770..784,794..799,890..901,911..913,1007..1009,
                     1055..1060,1064..1072)
                     /gene="ttm50"
                     /note="active site"
                     /db_xref="CDD:319823"
     polyA_site      1678
                     /gene="ttm50"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgggcgagtg ggccacaaaa aaccctaacg ccatcgccgt gccggtgcga ggttgaaatc
       61 tttattggaa attctgtaag aaaaaagtcg ctgctcggcg ggcaggactc gaaatcggtg
      121 caaggcaagg acacgaaatc gggcaagcat gaccatggca ccggccaccg tcctccagat
      181 gctgcgcggc ctgagcacgc cgcgggtact cagccaaatc caccagcacg gcgcattggg
      241 taatcactta acccgccacc accaccgact tgccacttcc acaacgctgc cattgccctc
      301 cagtctgctc ctccacacag cccgcggcta cagcagcacc accaagcagg agaatgcagc
      361 tggaggatcc agcagctcga gtgccccgct gctggccaag ctctttcccc agaccgcgcc
      421 cgaggtggac agcagcgccg agcaggagcg ccagaagcgc gaggaggagg aggccaagga
      481 gaacgagcgc gcctggaagc gcatgaagct gggcttcgcc atcttcggcg gcggtggggt
      541 ggccgctggc ttctgggccg tctacgagtt cgggaagccc gaggtggatc ccaatgggca
      601 gaccatcgag gacgagttca cacacaagcc gctggtgcag cagtatctgc agcgcatgtg
      661 gaagagcatc cactactatc agcggatgat ccaggagccg tcgcgggcca agctgctgcc
      721 cgatccgctc aagccgccgt atgtccagcc gcgctacacg ctcgtcctcg agatgaagga
      781 cgtgctggtg catccggact ggacatacca gacgggctgg cgcttcaaga agcgcccggg
      841 cgtcgatcac ttcctcgccg agtgcgccaa ggagttcgag atcgttgtgt ttaccgccga
      901 acagggcatg accgtattcc ccatcctgga cgccctcgat ccgaatggct atattatgta
      961 ccgcctggtc agggacgcca cccactttgt ggacggccat catgtgaaga atctggacaa
     1021 cctgaatcgt gatttgaaga aggtaattgt tattgactgg gatgcgaatg ccaccaaaat
     1081 gcatccggac aacacattcg gcttggcccg ctggcacggc aatgacgatg atggccagct
     1141 gctggacctg attgccttcc tgaagattat tgcccagaac aacgtggacg atgtgcgcga
     1201 ggtgctgcac tactaccgcc agttcgacga tcccatcagc cagttccggg agaaccagcg
     1261 ccggctggcc gagcaaatgc aggaggcgga gcgcgtcgag cagtcgaaga ccaagcccat
     1321 ggtcaagcag tggtcgcgca gcattctggg gcgctaggat caggaggctg gccatcccgc
     1381 acaccccgtt ccatatccat accttaacct tccttccttc cgcctgccgg agcacagaga
     1441 tcgggagaag ctacaaacat aaaagaaacc tgcagcagca cactggccat attttttcgt
     1501 cgatttagga gtaggaaggc aggaaggcac gcacttttta ttaattcccc tgggataaga
     1561 taaggcgaat gtttttgttt aaataaataa ctaaacttgc ttgtttttgt tgtttggcaa
     1621 tgtaatcata ataatattat tataaacaga tgacctaaaa gcgaaaccaa aaacataa