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LOCUS XM_017153859 2445 bp mRNA linear INV 09-DEC-2024 (LOC108065725), mRNA. ACCESSION XM_017153859 VERSION XM_017153859.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153859.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2445 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2445 /gene="LOC108065725" /note="uncharacterized LOC108065725; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065725" CDS 333..2249 /gene="LOC108065725" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017009348.2" /db_xref="GeneID:108065725" /translation="MSALANGGHEEDLKILGQLKSIEQINEQRRIFLNSTINEEASEE SNGAAVQEAELEKDLKELEELEPKKVAEDQKKVAEASPKKEQEPEVPEKTEQPKVQPP NTLSLNVKYATLPSPNVVTLRSPLSPPPKPPMLGRTRSIGAGDGKSPVSNGNGNGTLS PDNTLIRQSFPEGVLTGNSKNQAKSPVSPTPTPVGSEEPPATVSARHYEGLIEELRCP GCAGAMKAPILLCKSGHSVCEQCTRILLMCPLCKEPFTNSRSLTVEALCAKAHFRCGH ASGGCQVRMPVVLLPWHEQQCMYKPMKCFMGRVWGDCRWQGREVQWKEHLEENHGDRL FRSSSADLEWNLAARRKPLTGYYVFQAHDEMFNFYEIHDKQRILFTMTCTSNRRDSKY NYAYEVTVLQPDNEALSMTQKFPVHSEYDKDILMEGTCVSIPLAELNRFLDQDRVLHY RVSVLAVKSPRRAKPPRQSLPPVDLEQTSNGGVNGKSVPTSMIITRTYKEAIGEVAAA ADNSKAEVATPDSEEDAVAAGSGGSDGTGGLELERKWGTPQLHFNRKYLRNTLNDSTP LEDELRPLAADLRNGHGDDKLSQCSNSTSYTKKVSDSLRRSFRALKADIVEMRPFKKP VKAGSSSPVQANGN" misc_feature <471..638 /gene="LOC108065725" /note="Family of unknown function (DUF5321); Region: DUF5321; pfam17254" /db_xref="CDD:407369" misc_feature 981..1115 /gene="LOC108065725" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:473075" misc_feature order(981..983,990..992,1023..1025,1035..1037,1044..1046, 1053..1055,1074..1076,1083..1085) /gene="LOC108065725" /note="cross-brace motif; other site" /db_xref="CDD:438111" misc_feature 1107..1691 /gene="LOC108065725" /note="Seven in absentia protein family; Region: Sina; pfam03145" /db_xref="CDD:460824" polyA_site 2445 /gene="LOC108065725" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacatttca attgttggtg tccggaagac actcgcttcc gcggcggaga aggcgcaaga 61 acaggccaac ggggcgtgca cttgatatgt gggttcggtt ctagtttcca catcgtatat 121 gtatcacaca tcacaagtcg aaatcgatag ctggcccggc agctagttta gttaggcgtc 181 tccctgataa gataggggag tacgagtggc gaacgctcgc ggagaattcc gccagaagaa 241 aagcacattc tgccccctga gcttggagca actgttcccg gcggttatac aaccaacaga 301 ccactaaacc tcgacaagaa aaattctgga aaatgtctgc gctggccaat ggaggacacg 361 aggaggatct gaaaattctg ggtcagctga agagcatcga gcagatcaac gagcagcgcc 421 ggatattcct caacagcacg atcaacgagg aggcttcgga ggaatcaaat ggggctgcag 481 ttcaggaggc ggaactggag aaggatctga aggagttgga ggaactggag ccgaagaagg 541 tagccgagga tcagaagaaa gttgcagagg cgagcccgaa aaaggagcag gagccggagg 601 ttcccgaaaa aacggagcag cccaaggttc agcctccaaa cacgctcagc ctgaatgtga 661 aatacgccac cctaccaagt cccaatgtgg tcaccctgcg atccccactg tcgccgccac 721 ccaagccacc catgttgggt cgcaccagga gcataggtgc cggcgatggc aagagtcccg 781 tgagcaacgg caacggcaac ggaactctct cgccggacaa caccctgatc cgccagagct 841 ttcccgaggg cgtgcttacc gggaacagca aaaaccaagc caagtcgcca gtgagtccaa 901 ctcccactcc agttgggagt gaggaaccac cggccaccgt ctccgcccgc cactacgagg 961 gactgatcga ggagctgagg tgtcccggct gcgccggcgc catgaaggca cccatcctcc 1021 tctgcaagag cgggcacagt gtctgcgagc agtgcacccg cattctgctc atgtgcccac 1081 tgtgcaagga acccttcacc aactcccgat ccctgaccgt ggaggctctc tgtgccaagg 1141 cgcacttccg gtgcggacac gcctccggcg gctgccaggt gcggatgccg gtggtcctgc 1201 tgccctggca cgaacagcag tgcatgtaca agccgatgaa gtgcttcatg ggccgcgtgt 1261 ggggcgactg ccgctggcag ggacgcgagg tgcagtggaa ggagcacctg gaggagaacc 1321 acggcgaccg actcttccgc tcgagcagcg cggacctgga gtggaacctg gccgcgcggc 1381 ggaaaccgct gaccggctac tacgtcttcc aggcccacga cgagatgttc aacttctacg 1441 agatccacga caagcagcgc atcctcttca ccatgacctg cacctccaat cggcgggaca 1501 gcaagtacaa ctacgcctac gaggtgaccg tgctccagcc ggacaacgag gcgctctcca 1561 tgacccagaa gttccccgtg cacagcgagt acgacaagga catcctgatg gagggcacct 1621 gtgtcagcat tccgctggcg gagctcaatc gcttcctgga ccaagatagg gtcctccact 1681 accgcgtgag cgtgctggcg gtcaagtcgc cgcgacgagc gaaacctcct cgccagagtc 1741 ttccccccgt ggacctcgag cagacctcga atggaggagt caacggaaag agcgtgccca 1801 ccagcatgat cattacgcgc acctacaagg aggccatcgg cgaggtggct gccgctgccg 1861 acaactccaa ggcggaggtg gccactccgg actcggagga ggatgcggtg gccgctggca 1921 gtggtggtag cgatggaacc ggtggcctgg agctcgagcg caagtggggc acaccgcagc 1981 tgcacttcaa tcggaaatat ctgcggaaca ctctgaacga ctccacgcct ctggaggatg 2041 aactgcgtcc gctggctgcg gatctgcgca acggacatgg cgacgacaag ctctcgcagt 2101 gcagcaatag cacgagctac acgaaaaagg tctccgattc gctgcgaagg agtttccggg 2161 ccctcaaggc ggatatcgtg gagatgcggc cgttcaagaa gccagtcaag gcaggatcct 2221 cctctccggt ccaggccaac ggcaactagt gattccatgt gcgcttttcc ttttttttgt 2281 tttgtgtcgt taaaatacat aatttttaac acttcagttg aaagcatgta aatatagcaa 2341 attatttaaa tctattgaaa gatgtaacaa attcataacg aaaatatatt aaaatatatc 2401 tatataatta tacccgttac tcgtacagta aaagggtaca tagta