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PREDICTED: Drosophila takahashii uncharacterized PE-PGRS family


LOCUS       XM_017153856            3077 bp    mRNA    linear   INV 09-DEC-2024
            protein PE_PGRS46 (LOC108065723), transcript variant X1, mRNA.
ACCESSION   XM_017153856
VERSION     XM_017153856.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XM_017153856.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3077
                     /gene="LOC108065723"
                     /note="uncharacterized PE-PGRS family protein PE_PGRS46;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:108065723"
     CDS             405..3077
                     /gene="LOC108065723"
                     /codon_start=1
                     /product="uncharacterized PE-PGRS family protein
                     PE_PGRS46"
                     /protein_id="XP_017009345.2"
                     /db_xref="GeneID:108065723"
                     /translation="MRHAFVGLIVCWLAVCQPQAEAQFGGFGFQPQFQPQYQPQVYRQ
                     PQVYRQPQAYQAQPQPLVYYQQPQQVYQQPRQRQGSVSKANTNAYERQVDFGNNLEYT
                     QGLSNSRAVTKQNGQRVVTKSQAQTRDVDLGGLQLGNTLTRTRTNANGQVSQGIADQF
                     RIGNVGLGASLSPQNLQNGFGLQRGADGDLRLGLGLLNLDLDRNVANSNTLSQAQVNA
                     QGKGAKAGSSSNSQSNTQQYGGVTVTDTRSNSNAFGKTRRGQTSATTGGFGGSAATNG
                     QTFGAAPFQRVVRQNRPRPKRRAQFVPFGYPGGGFGPAPGPFGLGPLDRPRRQFGGGF
                     GGFGGFGGGPQFGGGPQFGGGGFGGPEFYEQPQQQQQQHKKKGNKNQAHGNANAQGGP
                     GFNQQASTNNHASPGNTGSSSISSNLAQDGSSGQVSSANTNTHQGQTANGGYESDQNS
                     QSQALNFRPGEQQASSANANTQHTQQGDRDAYSSNSGSTSTNNNQFGSATNTANTNSQ
                     VVKEGNRQDATSDANSQSIFQGNNGQGDASAQTNAQTSSQRGPNGFVSNSASSSATAT
                     AQNGQSANANANANAGGGAGGAGAGANAGGFGGGAGSDANASGGFGGNGGGAGANAGG
                     FGGFGGGGGANANSNAFGGFGGFGFYGLRHRAQQQIRLQRWQPRPQNGTSSRSSSTSS
                     TSSSINDNFEYVYFNHSSSSRLEDLQPGSSGQDRDGNGMGRVPLNTSVDVDAFGPYDR
                     TQRQGRTFGLIYDWISGLFNSCVSPCTLEAFQKQTCCETYVVDPSYPLPPPPPPPPPP
                     PQSCCAPVRPPYPSPPRPLPPPPPPPPMAYPYPPIYPNKNTPVMVVATPINCCTVCTF
                     TYYGPPPCGRLYNNNTSSGDGKKVIYVPPPYYGR"
ORIGIN      
        1 caacgggctt agaacgaaac ggaacgtccg acgcccaaca acttccatcg cgctctccga
       61 aaaacgcgtt aaaaacaaga aaaatcaaga gagctttttt cagtgtagcc agagaggaag
      121 agttgtagag aagaaccggc ggaacaacaa actgaacagc gacacggcga aaaaaaaaca
      181 cggcggagaa acaataaaag tcggccagcg gccaaaaacg cgctcattgc gtgcgctgtt
      241 ttcgcaacgg caacggaaaa ttagccaccc agttgaggtg cgagcgagat agccagctag
      301 cgagtgtagt acggcaacgg aatacggatt ttccgagtga cgggaaaagt acggaaaagc
      361 agaggacagg agcacggaac acagagtgcg gatacgaagc caggatgcga cacgcatttg
      421 ttggattaat tgtgtgctgg ctggcagttt gtcaaccgca agctgaggcg cagttcggag
      481 gctttgggtt ccagccgcag ttccagccgc agtaccagcc gcaggtatat cggcaaccgc
      541 aggtgtaccg ccaaccgcag gcttaccaag ctcaaccaca acctctggtt tattaccaac
      601 agccccagca ggtctaccag cagccccgcc agcgacaggg atccgtctcg aaggccaaca
      661 cgaatgccta cgagcggcag gtggacttcg ggaacaatct ggagtacacg cagggcctct
      721 cgaactcgcg ggcggtgacc aagcagaatg ggcagcgcgt ggtgaccaag agccaggcgc
      781 agacgaggga cgtggacctg ggcggcctgc agctgggcaa cacgctgacc cgcacgcgga
      841 ccaatgccaa cgggcaggtg tcccagggca tcgccgatca gttcaggatc ggaaatgtcg
      901 gactgggcgc ctccctgtcg ccgcagaacc tgcagaacgg cttcggcctg cagcgcggcg
      961 ccgacggtga cctccgcttg ggcctgggcc tcctcaatct cgacctggac cgcaatgtgg
     1021 ccaactcgaa cacgctgtcg caggcccagg tgaatgccca gggcaagggc gccaaggcgg
     1081 gatcgagcag caattcgcag tcgaataccc agcagtacgg cggagtcacc gttacggata
     1141 cgcgctccaa ctcgaatgcc tttggcaaga cgcgcagggg ccagacctcg gccaccacgg
     1201 gaggattcgg aggcagtgcg gccaccaatg gccagacctt cggcgccgct cccttccagc
     1261 gggtggtgcg ccagaacagg ccgcggccca agaggcgggc ccagttcgtg cccttcggct
     1321 atccgggagg cggcttcggt cccgcccccg gacccttcgg cctgggaccc ttggacaggc
     1381 caaggaggca gttcggcggt ggctttggcg gcttcggtgg cttcggagga ggcccgcaat
     1441 tcgggggagg accacaattc ggaggcggtg gcttcggagg acccgagttc tacgagcagc
     1501 cccagcagca gcagcagcag cacaagaaga agggcaacaa gaaccaggcg catggcaatg
     1561 cgaatgccca gggcggaccg ggcttcaacc agcaggcgtc gacgaacaac cacgcgagtc
     1621 ccggcaacac gggcagcagc tcgatcagct ccaatttggc ccaggacggc agcagcgggc
     1681 aggtgagctc ggccaacacg aacacccacc aggggcagac ggccaacggg ggctacgaaa
     1741 gtgatcagaa ctcgcagagc caggccctca acttccggcc cggcgagcag caggcctcca
     1801 gtgcgaatgc caacacccag cacacccagc agggcgaccg ggatgcctac tcctcgaaca
     1861 gcggctccac ctccacgaac aacaaccagt ttggctccgc caccaacacc gcgaacacca
     1921 attcgcaggt ggtcaaggag ggcaatcgcc aggatgcgac cagtgatgcc aacagccaga
     1981 gcatcttcca gggcaacaac ggccagggag acgcctccgc ccagacgaac gcccagacga
     2041 gcagccagcg gggtcccaat ggattcgtga gcaactcggc ctccagcagc gccaccgcca
     2101 ccgcccagaa cggccagtcg gccaatgcga acgcgaatgc gaatgcgggc ggtggtgccg
     2161 gtggtgcggg agccggcgca aatgccggtg gcttcggcgg tggtgcaggt tccgatgcca
     2221 atgcatccgg tggattcgga ggcaacggtg gtggtgccgg ggcaaatgcc ggcggcttcg
     2281 gtggcttcgg cggcggcggc ggcgccaatg ccaatagcaa cgcctttggc ggcttcggcg
     2341 gcttcggctt ctacggactt cgccatcgag cccagcaaca gattcgcttg cagcgctggc
     2401 agccacgccc ccaaaacggc acttcatccc ggagctcgtc tacctcatcc acctcctcct
     2461 cgataaacga taactttgag tacgtgtact tcaaccactc gtcttcgtca cgccttgaag
     2521 atctgcagcc cgggagttct ggccaggatc gggatgggaa tggaatgggt agggtgccgc
     2581 tgaacacctc ggtggatgtg gatgccttcg ggccgtacga tagaacccag cgtcaggggc
     2641 ggaccttcgg tttgatctac gactggatca gtggcctctt caactcctgc gtttcgccct
     2701 gcaccctgga ggccttccag aagcaaacct gctgcgaaac gtatgtggtg gatccctcgt
     2761 acccccttcc tcctcctcct ccgccacccc ctccgccacc acaaagctgc tgtgctcctg
     2821 tgagaccacc ctacccctct ccacccagac cactgccccc tcctcctcca ccgccaccca
     2881 tggcctaccc ctatccaccc atttatccca ataagaatac gcccgtgatg gtggtggcca
     2941 cgcccatcaa ctgctgcacc gtgtgcacat tcacctacta cggacctccg ccctgtgggc
     3001 ggctctacaa caacaacacc agcagcgggg atggcaagaa ggtcatctat gtgccaccac
     3061 cctattacgg ccgctaa