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LOCUS XM_017153851 2237 bp mRNA linear INV 09-DEC-2024 4 (LOC108065720), transcript variant X5, mRNA. ACCESSION XM_017153851 VERSION XM_017153851.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017153851.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2237 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2237 /gene="LOC108065720" /note="sodium/potassium/calcium exchanger 4; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108065720" CDS 189..1562 /gene="LOC108065720" /codon_start=1 /product="sodium/potassium/calcium exchanger 4 isoform X5" /protein_id="XP_017009340.2" /db_xref="GeneID:108065720" /translation="MDEFADLFTVEQLRQGWVVLHVFAAVYFFILLAIICNDYFLPTV ECICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLMFNTLGV AGLAALAIDKPVQLDWWPIARDCFIYIFNTIILLVLAWGGSISFTESCIMMGFLVLYY LITFNNNKFMPAIRVFIEDRMNCCFSTRYDLTEPPENSAKAQLPLKKDPLSGDGLFVV NLPENTSSMSSTANLTHSKHWNDEDYEEDGMPESIYTYPRDASGWMQFWWIFVFPIRF TLSLLIPHPMKYRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLA AGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFVKNCINYGTGEPQQ VGTQGIEYNILILIISTVALFVILSFSGYRLTKRVGVALFTVYGVFIVLQILIEMNVF FPRDCSS" misc_feature <204..>734 /gene="LOC108065720" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" misc_feature 390..1514 /gene="LOC108065720" /note="Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; Region: ECM27; COG0530" /db_xref="CDD:440296" polyA_site 2237 /gene="LOC108065720" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggcgggacgc gaaatgagtg cccatggttg tggatgtgaa tttgacccac tgggtttgag 61 tgcagggagt atcagcaact ggcaacggaa gcaattttct ggaggtctca ctacggtatt 121 ttgacgagca gcttctgctg gatattcttc cacgtgccac gtgtcctggc gagaatgaag 181 gatctccgat ggacgagttt gccgacctgt ttacggtgga acagctccgc cagggatggg 241 tggtgctgca cgtctttgcc gcggtttact ttttcatcct gctcgccatt atctgcaacg 301 actacttctt gccgacggtg gaatgcatct gcgaggactt gcacctatca aaggatgtgg 361 cggcggccac tttcatggcc acagccacct ccatgcccga gttctttacc aacacgatca 421 gtacgttgat cctggagtcg gatatgggcc tggggacgat catcggctca ttaatgttca 481 atacactggg cgtggccgga ttggccgcac tggccatcga taagccagtg cagcttgact 541 ggtggccaat agcccgcgac tgcttcatct acatcttcaa cacgattatc ctgctggttt 601 tggcctgggg cggcagtatt agcttcacgg agtcctgcat catgatggga ttcctagttc 661 tctattacct aatcacgttc aacaacaaca agtttatgcc agccatccgg gtatttattg 721 aggatcggat gaattgctgt ttctccacac gatatgacct aacggagccc ccagagaaca 781 gtgccaaggc ccagctgccg ctcaagaagg atccactctc gggcgatggc ctctttgtgg 841 tcaatcttcc cgaaaacacc tcgtccatgt cctctaccgc caatctcacg cactcaaagc 901 actggaacga cgaggattac gaggaagacg gtatgcctga aagtatatac acttacccgc 961 gggacgcctc cggatggatg cagttctggt ggatcttcgt cttccccatt aggtttacgc 1021 tatccttgct gatcccccac ccgatgaagt accgccgcct gtatccatta tcttttatca 1081 tgtgcatcct gtgtattggc ggtaacgcct atctcattgt ctggatgctg actgccttcg 1141 gtgtggccat ccatgtgccc accattgtga tgggtctgac cttcctggca gctgggtcca 1201 ccatgccgga agccgtgtcc agccttatat cgctaagaaa tggtgaaaat ggcattggcg 1261 tttcgaattc gttgggcgcc aattcgctgg ctatattgtt atcgctggga gtcccatggt 1321 ttgtcaagaa ctgtataaac tacggcaccg gggagcccca gcaagtgggc actcaaggca 1381 tcgagtacaa catcctaatc ctaataatat ccacggtggc gcttttcgtt atcctcagct 1441 ttagtggcta tcgtcttacc aaacgtgtag gcgtggccct ctttacggtt tatggagtgt 1501 ttatcgttct gcagatcctc atcgaaatga acgtcttctt ccccagagat tgcagtagct 1561 agtaatggac ctggatctgg aaacctagaa atgggaaaaa ccgacacttg cacaatcctt 1621 ttggtgctgg caccagaagg ttaatacccc ggcaacccgc ttacagggtc tgaattcgtt 1681 ttgaactctt ttttggttat tactatttct ggtaaagttt aaattattta aatgataagt 1741 acaacaacga cttccttttg taattatcat tttaatattc aaccgcaaat cggaaacagt 1801 acataccaaa tatttttttt acactagttt acgcttggtt attgcctaag actgtcatta 1861 ggtttagaca acgaagcttt cagcagcgat ttctatttat ttcgtgttat acatattgta 1921 aatatgactc tttgtatatc ccatagcctg tagtaccatt cacaaatgtt taaaccgtta 1981 ccaaagccca aaacgagata ctagcagtta agaggataag cacacgcata tcaacatata 2041 agagcccacg atatttaccc gttctgtccc gggcccaaaa attctaagaa aagttcgtaa 2101 ggccactcac aataacctct aattgatatt ctgcacattc atgtatgctt aacgctgtag 2161 gaacgaattg ttaacgttat ctaataccct cgatacaatt gttattaatt tataaataca 2221 ccctaagatt aatgtga