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LOCUS XM_017153850 2227 bp mRNA linear INV 09-DEC-2024 4 (LOC108065720), transcript variant X4, mRNA. ACCESSION XM_017153850 VERSION XM_017153850.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017153850.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2227 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2227 /gene="LOC108065720" /note="sodium/potassium/calcium exchanger 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065720" CDS 11..1552 /gene="LOC108065720" /codon_start=1 /product="sodium/potassium/calcium exchanger 4 isoform X4" /protein_id="XP_017009339.2" /db_xref="GeneID:108065720" /translation="MSAHGCGCEFDPLGLSAGTTGNGSNFLEVSLRYFDEQLLLDILP RATCPGENEGSPMDEFADLFTVEQLRQGWVVLHVFAAVYFFILLAIICNDYFLPTVEC ICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLMFNTLGVAG LAALAIDKPVQLDWWPIARDCFIYIFNTIILLVLAWGGSISFTESCIMMGFLVLYYLI TFNNNKFMPAIRVFIEDRMNCCFSTRYDLTEPPENSAKAQLPLKKDPLSGDGLFVVNL PENTSSMSSTANLTHSKHWNDEDYEEDGMPESIYTYPRDASGWMQFWWIFVFPIRFTL SLLIPHPMKYRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVMGLTFLAAG STMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFVKNCINYGTGEPQQVG TQGIEYNILILIISTVALFVILSFSGYRLTKRVGVALFTVYGVFIVLQILIEMNVFFP RDCSS" misc_feature <140..>724 /gene="LOC108065720" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" misc_feature 380..1504 /gene="LOC108065720" /note="Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; Region: ECM27; COG0530" /db_xref="CDD:440296" polyA_site 2227 /gene="LOC108065720" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gggacgcgaa atgagtgccc atggttgtgg atgtgaattt gacccactgg gtttgagtgc 61 agggacaact ggcaacggaa gcaattttct ggaggtctca ctacggtatt ttgacgagca 121 gcttctgctg gatattcttc cacgtgccac gtgtcctggc gagaatgaag gatctccgat 181 ggacgagttt gccgacctgt ttacggtgga acagctccgc cagggatggg tggtgctgca 241 cgtctttgcc gcggtttact ttttcatcct gctcgccatt atctgcaacg actacttctt 301 gccgacggtg gaatgcatct gcgaggactt gcacctatca aaggatgtgg cggcggccac 361 tttcatggcc acagccacct ccatgcccga gttctttacc aacacgatca gtacgttgat 421 cctggagtcg gatatgggcc tggggacgat catcggctca ttaatgttca atacactggg 481 cgtggccgga ttggccgcac tggccatcga taagccagtg cagcttgact ggtggccaat 541 agcccgcgac tgcttcatct acatcttcaa cacgattatc ctgctggttt tggcctgggg 601 cggcagtatt agcttcacgg agtcctgcat catgatggga ttcctagttc tctattacct 661 aatcacgttc aacaacaaca agtttatgcc agccatccgg gtatttattg aggatcggat 721 gaattgctgt ttctccacac gatatgacct aacggagccc ccagagaaca gtgccaaggc 781 ccagctgccg ctcaagaagg atccactctc gggcgatggc ctctttgtgg tcaatcttcc 841 cgaaaacacc tcgtccatgt cctctaccgc caatctcacg cactcaaagc actggaacga 901 cgaggattac gaggaagacg gtatgcctga aagtatatac acttacccgc gggacgcctc 961 cggatggatg cagttctggt ggatcttcgt cttccccatt aggtttacgc tatccttgct 1021 gatcccccac ccgatgaagt accgccgcct gtatccatta tcttttatca tgtgcatcct 1081 gtgtattggc ggtaacgcct atctcattgt ctggatgctg actgccttcg gtgtggccat 1141 ccatgtgccc accattgtga tgggtctgac cttcctggca gctgggtcca ccatgccgga 1201 agccgtgtcc agccttatat cgctaagaaa tggtgaaaat ggcattggcg tttcgaattc 1261 gttgggcgcc aattcgctgg ctatattgtt atcgctggga gtcccatggt ttgtcaagaa 1321 ctgtataaac tacggcaccg gggagcccca gcaagtgggc actcaaggca tcgagtacaa 1381 catcctaatc ctaataatat ccacggtggc gcttttcgtt atcctcagct ttagtggcta 1441 tcgtcttacc aaacgtgtag gcgtggccct ctttacggtt tatggagtgt ttatcgttct 1501 gcagatcctc atcgaaatga acgtcttctt ccccagagat tgcagtagct agtaatggac 1561 ctggatctgg aaacctagaa atgggaaaaa ccgacacttg cacaatcctt ttggtgctgg 1621 caccagaagg ttaatacccc ggcaacccgc ttacagggtc tgaattcgtt ttgaactctt 1681 ttttggttat tactatttct ggtaaagttt aaattattta aatgataagt acaacaacga 1741 cttccttttg taattatcat tttaatattc aaccgcaaat cggaaacagt acataccaaa 1801 tatttttttt acactagttt acgcttggtt attgcctaag actgtcatta ggtttagaca 1861 acgaagcttt cagcagcgat ttctatttat ttcgtgttat acatattgta aatatgactc 1921 tttgtatatc ccatagcctg tagtaccatt cacaaatgtt taaaccgtta ccaaagccca 1981 aaacgagata ctagcagtta agaggataag cacacgcata tcaacatata agagcccacg 2041 atatttaccc gttctgtccc gggcccaaaa attctaagaa aagttcgtaa ggccactcac 2101 aataacctct aattgatatt ctgcacattc atgtatgctt aacgctgtag gaacgaattg 2161 ttaacgttat ctaataccct cgatacaatt gttattaatt tataaataca ccctaagatt 2221 aatgtga