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LOCUS XM_017153848 2524 bp mRNA linear INV 09-DEC-2024 4 (LOC108065720), transcript variant X2, mRNA. ACCESSION XM_017153848 VERSION XM_017153848.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017153848.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2524 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2524 /gene="LOC108065720" /note="sodium/potassium/calcium exchanger 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065720" CDS 284..1849 /gene="LOC108065720" /codon_start=1 /product="sodium/potassium/calcium exchanger 4 isoform X2" /protein_id="XP_017009337.2" /db_xref="GeneID:108065720" /translation="MVRTTSLFLSLFVIICGSILPDIQAKATGNGSNFLEVSLRYFDE QLLLDILPRATCPGENEGSPMDEFADLFTVEQLRQGWVVLHVFAAVYFFILLAIICND YFLPTVECICEDLHLSKDVAAATFMATATSMPEFFTNTISTLILESDMGLGTIIGSLM FNTLGVAGLAALAIDKPVQLDWWPIARDCFIYIFNTIILLVLAWGGSISFTESCIMMG FLVLYYLITFNNNKFMPAIRVFIEDRMNCCFSTRYDLTEPPENSAKAQLPLKKDPLSG DGLFVVNLPENTSSMSSTANLTHSKHWNDEDYEEDGMPESIYTYPRDASGWMQFWWIF VFPIRFTLSLLIPHPMKYRRLYPLSFIMCILCIGGNAYLIVWMLTAFGVAIHVPTIVM GLTFLAAGSTMPEAVSSLISLRNGENGIGVSNSLGANSLAILLSLGVPWFVKNCINYG TGEPQQVGTQGIEYNILILIISTVALFVILSFSGYRLTKRVGVALFTVYGVFIVLQIL IEMNVFFPRDCSS" misc_feature <437..>1021 /gene="LOC108065720" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" misc_feature 677..1801 /gene="LOC108065720" /note="Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]; Region: ECM27; COG0530" /db_xref="CDD:440296" polyA_site 2524 /gene="LOC108065720" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttctagccaa gcggtttgcc ggagtttgcc agcgaaaagt ggcgaaaata aagtaccgag 61 aacggaagtc cgaaaattcg aactcgaatt tccgccagca aaaagaatcg gagcgctccg 121 gtgcgcatac gccgtgcgtg tttcccattc cacaataagg cactatataa aaatataaag 181 tcggttaaag tgccgccagc acgtgcatta tctgaagttg ttttttattt tttacgttcc 241 atcgccgttt gtttttgttt tttataagca ttcgtaatcc gatatggtta gaactacgtc 301 ccttttctta agcttattcg taataatatg tggaagcatt ttaccggata ttcaagcgaa 361 agcaactggc aacggaagca attttctgga ggtctcacta cggtattttg acgagcagct 421 tctgctggat attcttccac gtgccacgtg tcctggcgag aatgaaggat ctccgatgga 481 cgagtttgcc gacctgttta cggtggaaca gctccgccag ggatgggtgg tgctgcacgt 541 ctttgccgcg gtttactttt tcatcctgct cgccattatc tgcaacgact acttcttgcc 601 gacggtggaa tgcatctgcg aggacttgca cctatcaaag gatgtggcgg cggccacttt 661 catggccaca gccacctcca tgcccgagtt ctttaccaac acgatcagta cgttgatcct 721 ggagtcggat atgggcctgg ggacgatcat cggctcatta atgttcaata cactgggcgt 781 ggccggattg gccgcactgg ccatcgataa gccagtgcag cttgactggt ggccaatagc 841 ccgcgactgc ttcatctaca tcttcaacac gattatcctg ctggttttgg cctggggcgg 901 cagtattagc ttcacggagt cctgcatcat gatgggattc ctagttctct attacctaat 961 cacgttcaac aacaacaagt ttatgccagc catccgggta tttattgagg atcggatgaa 1021 ttgctgtttc tccacacgat atgacctaac ggagccccca gagaacagtg ccaaggccca 1081 gctgccgctc aagaaggatc cactctcggg cgatggcctc tttgtggtca atcttcccga 1141 aaacacctcg tccatgtcct ctaccgccaa tctcacgcac tcaaagcact ggaacgacga 1201 ggattacgag gaagacggta tgcctgaaag tatatacact tacccgcggg acgcctccgg 1261 atggatgcag ttctggtgga tcttcgtctt ccccattagg tttacgctat ccttgctgat 1321 cccccacccg atgaagtacc gccgcctgta tccattatct tttatcatgt gcatcctgtg 1381 tattggcggt aacgcctatc tcattgtctg gatgctgact gccttcggtg tggccatcca 1441 tgtgcccacc attgtgatgg gtctgacctt cctggcagct gggtccacca tgccggaagc 1501 cgtgtccagc cttatatcgc taagaaatgg tgaaaatggc attggcgttt cgaattcgtt 1561 gggcgccaat tcgctggcta tattgttatc gctgggagtc ccatggtttg tcaagaactg 1621 tataaactac ggcaccgggg agccccagca agtgggcact caaggcatcg agtacaacat 1681 cctaatccta ataatatcca cggtggcgct tttcgttatc ctcagcttta gtggctatcg 1741 tcttaccaaa cgtgtaggcg tggccctctt tacggtttat ggagtgttta tcgttctgca 1801 gatcctcatc gaaatgaacg tcttcttccc cagagattgc agtagctagt aatggacctg 1861 gatctggaaa cctagaaatg ggaaaaaccg acacttgcac aatccttttg gtgctggcac 1921 cagaaggtta ataccccggc aacccgctta cagggtctga attcgttttg aactcttttt 1981 tggttattac tatttctggt aaagtttaaa ttatttaaat gataagtaca acaacgactt 2041 ccttttgtaa ttatcatttt aatattcaac cgcaaatcgg aaacagtaca taccaaatat 2101 tttttttaca ctagtttacg cttggttatt gcctaagact gtcattaggt ttagacaacg 2161 aagctttcag cagcgatttc tatttatttc gtgttataca tattgtaaat atgactcttt 2221 gtatatccca tagcctgtag taccattcac aaatgtttaa accgttacca aagcccaaaa 2281 cgagatacta gcagttaaga ggataagcac acgcatatca acatataaga gcccacgata 2341 tttacccgtt ctgtcccggg cccaaaaatt ctaagaaaag ttcgtaaggc cactcacaat 2401 aacctctaat tgatattctg cacattcatg tatgcttaac gctgtaggaa cgaattgtta 2461 acgttatcta ataccctcga tacaattgtt attaatttat aaatacaccc taagattaat 2521 gtga