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LOCUS XM_017153843 2328 bp mRNA linear INV 09-DEC-2024 anchor attachment 1 (GAA1), mRNA. ACCESSION XM_017153843 VERSION XM_017153843.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153843.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2328 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2328 /gene="GAA1" /note="glycosylphosphatidylinositol anchor attachment 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065717" CDS 116..2131 /gene="GAA1" /codon_start=1 /product="glycosylphosphatidylinositol anchor attachment 1 protein" /protein_id="XP_017009332.2" /db_xref="GeneID:108065717" /translation="MGLLSDPSISTQSKLVDGLARHVRKVCYALYVAGVVWFFCLALP EFNHGTYLSENALSPGLVYPEIRIDANRLAIQLLEELQRERKDHLSTTPHAWIAAKMN EFGLETHTHNYTLRYPFGGGKEYHGKNIYGILRAPRIASTEGIVFAAPYRAASSVHSD ISASVPLLLAFADFARRKNYWAKDLVFLVTEQEQLGMQAWLEAYHDGDRDLDVSKAYL RPGNLPARAGSLQAALNIEVQDLEIDHVDVRIEGLNGKLPNLDMFNLVQRIMAREGIA SGYKQAPRKKRRHMQSVFELNLRQMLTMLASQSSGVPNGNHGLFHRYRIDALTIAANR RATHATLKGSPGSAAVPLLKAIEGIARSLNNLLERFHQSFFFYVIVNNDRYISIGDYM PALVALVACAFVKAYLTWSTLPATNAELERAAGLVREQGEEEELDTDGDKFELPYGSV LIYLTATLLIGFLCNVLPLQQYFLEIPMGAAPLTTSVLSFLSLIGFILPFVVVLPPGG LELLHVAFLLTYGCALIVIGLLNFALGFFAAVLTVPLVVALETKEENSRSTLRNTIRL ATLAMNPMMVIYVIVLAMTFYQFPELPLQKIMLRAATAAMDASAYGLIDSVIYGNWLY FVICTIFLPLWIICWTLALSKRRDYADYLDFDESPSTSPQPPKVKTN" misc_feature 491..2032 /gene="GAA1" /note="Gaa1-like, GPI transamidase component; Region: Gaa1; pfam04114" /db_xref="CDD:461181" polyA_site 2328 /gene="GAA1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgatagccgc aaacgataac gcccgcatcg atagaccctt atttcgccgg acttgcccga 61 tttgtgttgt tgtgattcgg gatatataca ggatatagct tagccgggat ccaaaatggg 121 cctgctctcg gatccgtcga tatccacgca gagcaagctg gtggacggac tggcgcgcca 181 tgtccgcaag gtgtgctacg ctttatatgt ggcgggtgtg gtctggttct tctgcttggc 241 gctgccggag tttaatcatg gaacatatct ctcggaaaat gccctctccc caggcctcgt 301 ttatcccgag atccgcatcg acgccaatcg cctggccatc cagctgctgg aggagctgca 361 gcgcgagcgc aaggatcatt tgtccaccac gccgcacgcc tggatcgcgg ccaagatgaa 421 cgagttcggt ctggagacgc acacgcacaa ctacacgctg cgctatccct ttggcggcgg 481 caaggagtat cacggcaaga atatctatgg tatattaagg gctcctcgga ttgcctccac 541 ggagggcatt gtttttgccg ctccctaccg cgccgccagc tctgtgcact cggacatctc 601 ggccagcgtg ccgctcctgc tggcctttgc cgatttcgcg cggcgcaaga actactgggc 661 caaggatctg gtgtttttgg taaccgaaca ggagcagctg ggcatgcagg cctggctgga 721 ggcctatcac gatggcgata gggatctgga tgtgagcaag gcgtatctgc gtcccggcaa 781 tttgcccgct cgcgctggct ccctgcaggc tgctttaaat atcgaggttc aggatctgga 841 gatcgaccat gtggatgtgc gaattgaggg tctgaatggc aaactgccca atttggatat 901 gtttaatctg gtgcagcgca ttatggcccg cgagggcatc gcctcgggct acaagcaggc 961 gccgcgcaag aagcgtcgcc acatgcagtc cgttttcgag ctcaatctcc gccagatgct 1021 gaccatgctg gccagccagt cgtcgggcgt gccgaatggc aatcatggtc tgtttcatcg 1081 ctatcgcatt gatgctttga ccatagcggc caatcgcagg gccacccatg ccacgctgaa 1141 gggcagtccg ggatcggcag cggttcccct gctaaaagcc attgagggaa ttgctaggag 1201 cctgaacaac ctgctggagc gcttccatca gagcttcttc ttttatgtca tcgtaaacaa 1261 tgatcggtac atctccatcg gcgattatat gcccgccttg gtggctctgg tggcctgtgc 1321 ctttgtcaag gcctatctta catggtccac gctgccggcg acgaatgctg agttggaaag 1381 ggcagctggc ctggtcaggg agcagggaga ggaggaggaa ctggatacgg atggcgataa 1441 attcgagctg ccctatggct ccgttttgat ttacctcacc gccactttgc tgattggctt 1501 cctgtgcaac gtgctgcccc tgcagcagta cttcctcgag attcccatgg gcgccgcacc 1561 gctgaccacc tcggtgctta gtttcctctc gctcatcggc ttcattctgc ccttcgtggt 1621 cgttctgccg cccggcggcc tggagctgct gcacgtggcc tttctgctca cctatggctg 1681 cgctctgatc gtcatcgggt tgcttaactt tgccctgggc ttctttgcag ccgtgcttac 1741 ggtgccgctg gtcgtcgcgc tggagaccaa ggaggagaac tcgcgcagca cgctgaggaa 1801 caccattcgc ctggccacgc tggccatgaa tcccatgatg gtgatctatg tgatcgtgct 1861 ggccatgacc ttctatcagt ttccggagct gccgctgcag aagatcatgc taagggcggc 1921 caccgcggcc atggatgcct cggcctatgg gctcatcgat tcagtgatct atggcaactg 1981 gctgtacttt gtcatctgca ccatcttcct gcccctgtgg atcatctgct ggaccttggc 2041 gctgtccaag cggcgggact acgccgatta cctcgacttc gatgagtcgc cgtccacgtc 2101 gccacagccg ccaaaggtga agacgaattg agcagatttc cattcaaatg ttactcaatg 2161 tttgattgaa tgtctacata tatcaactgg aaattatcct aagataaagt gtgataaacc 2221 caacaaaaat gtgtgcgatg gcggttgcac atgcagagaa aattccattt aaatgttatg 2281 catttgatta aatgtctatg aataaatgaa gcctatttat tagttgga