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LOCUS XM_017153816 5645 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017153816 VERSION XM_017153816.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153816.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5645 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5645 /gene="fs(1)M3" /note="female sterile (1) M3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065698" CDS 61..5553 /gene="fs(1)M3" /codon_start=1 /product="uncharacterized protein fs(1)M3" /protein_id="XP_017009305.2" /db_xref="GeneID:108065698" /translation="MFSPAIFNAVLFSVIVFHIAQVRSGLSAEEVPGNPRAAQLLPTA CRNGLNGSAAGPEIHLPFVDMMVRHEMPLFVLREPEEDLLLLLHGPEIFQLHVATGER RLVPLGSLAGQVKDRRALGAEIVAWRQFLLLSIVLEDSLEVYQLPKDLLLSEDPATQL SFEPLQEFSLPGGFLQLHLLKPSAEQVLLLVASNHTRSHSKCRTFEWLDTYFNPLEEI TLPAIRALQVVGRQQLYIIFGRSLRGSQSKMVLTVYELDRSTRTLQHRQALTVQAQSV QAARFRGRNCLIACSSSSSANCIFFRMVDGQFVVYRKHARRDLSFHRLSATKRGELLI GARSNGEVIVFGSTRLDCFSGFQVVGESEPSGLLTHRNARNESFLLLAYRGATSDLIR TVQLGKLEETSNQVGAAPEEDLSVVQLHRHEFEESINALRGLLLRRRSPLETLRNLIN SLKLRSVIHLEKPLHLHEKGHIERLQLVDDQLRTPTQLKQRLEELRQRYESRRTTRSF GTANENDAGDKLKVRRLRVGNLIYQGQLMPDHILDTSEPPLLTIRNSRLLTKTLKTKQ LLTPQDYHNSSASPIPKQPTTNRSECVVRHLNIEQINGVIWNDFLDSLFLRSRDTRLS GKLVMQSRTRVNSLKTTLLNGLVVDRLFNLRRAQVISSDIYMSAFFAPRLEARRVNGL DFAQDVLYRGGNASWVKTPVRINQMSVSGDIVVANQGKFKKQSRQPEESEEQRLQQYY TGRVTIRGSLTVRNVQRDTANSLVVLGNQSLAKNDLHSKYLLNQTQQNLSNLTFGDAR VSAPSLTTNFIEGHPVRDHLLSGGQQNIHTHPNRTLHIIFMNATVQGDIICRDYVSRL AEIAKDAVRHGQEANITGHKRFQAPLTVQSIRTDQINGLPITQLVLKSNITQNFKGTK SFARLVVTEDLKVRKHLNVSRLNGLPLQQLLGHDVSLQRLELTEMPHLENLHFRRLNG LPFDELLSTISEGNDQPLLLHKQLLIEGNVRFEKALQLQDINGIHWEDYLSRLVRPDA NAELRGRKTFLADVQLNDALHTPHINNLDLSSLLDNTLLRMTPQQISGVYSFERMMAT NVDVSRINGVPKEEFIDTRKDLELKGDLYLKQLNISGSLKGTFAKDPGLSDLKERVKR VQQLPWRNLIVTVDALWDEGAGQSQSPLDYLRQHAVRKVGNQTITGHVLLKEPHFKNL QSEQSLPIELNLTYLAEDALLRRSATNESQVILAPQKLLGLVRAGSLHLEKDAHFGLV NGIDIERLNASLYRLSSGEAIAADLHFLQSPRIGKLQLEVPEVNGHPIESIYQQGKGQ SWPAVRFKQLVVEKDLNLGSVNEMSLDYFLQHRITLRGPALEVFGSLSFEHLQLDGRP LLRSINGIPLDNVVFRHSNQAQSITGVKTFHGGVHFTGPGHVMNLNGRDLSDSFRGSI FRNRDYNIDSLVLDRASFPGGLVLAGSQSPSRMRTMEVPQENQLEELQELLTLGNQSS YKRLLYLDHDLETLESTWVKPPLRGSPEDPEANLPLGDAAPCQRRSLQAHLRISQRLV LLANVSVSSQLMRLNSGNVRVKVQNHCHLPARKLRSRISLSCRNESHVLAMRQPVEAM ELITREGEEILLLGTEEEVRVLRLKGSNCSLIDWQSILPADGRLMKVIQMEIEPNEDL LLTSGLSNHRPVLAIHVRDLASQNFKLIQLIPGSYDLAEMQGNQLLASCLGCRHVAIF KRNQTLFEAIQQLSFQERIHQLTPFNVGEEQYLLVITQPEEDHFYLFVYNQVGGWQQR TFGSKNQYQWAWPLVKSGQKLEAVESPIMLLCGREKKCSLVKALLG" polyA_site 5645 /gene="fs(1)M3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcccatgtg aatggaatga aaaattgact ttactccagt tcgtgtgaaa actcagtgaa 61 atgttttcgc ccgctatatt taatgcagtg ttatttagtg ttatagtgtt ccatatagcc 121 caagtacgat ctggtttatc agccgaagaa gtacccggaa atccaagggc agcccaactt 181 cttcccaccg cctgtcgcaa tgggttaaat ggcagtgccg ctggtccgga aatccatctt 241 ccatttgtgg atatgatggt gcgccacgaa atgccactct ttgtactccg cgaaccggaa 301 gaggatttac tgctgctgct ccatggaccc gagattttcc aactgcacgt ggccaccggc 361 gagcgacgtc tggtgcccct tggcagtttg gcgggtcagg tgaaggatcg cagggcgctc 421 ggtgcagaaa tcgtggcctg gcggcagttt ctgctccttt ccatcgtcct ggaggattcg 481 ctggaggtgt accaactgcc caaggacctg ctgctctccg aagatcccgc cacgcaactg 541 agtttcgagc ccctgcagga gttctcgctg ccaggaggat tccttcagct ccacctactg 601 aaacccagcg ccgaacaggt gctcctgctg gtggcctcca atcataccag gtcgcacagc 661 aagtgcagaa catttgagtg gctggacact tactttaatc ccctcgagga gatcacttta 721 cccgccattc gcgctctcca agtggtcggt cgtcagcagc tgtacattat ttttgggcga 781 tctttaaggg gctctcaatc gaagatggtg ctcactgtct acgaactgga taggagcacc 841 cgcactttgc aacatcgcca ggccctgacg gttcaggccc aaagtgtcca ggctgctaga 901 ttccgtggcc ggaactgcct gatcgcctgc agttcctcat catccgccaa ctgcattttc 961 ttccgcatgg tggatggtca atttgtggtc tatcgaaagc atgctcgcag ggatctgagt 1021 ttccatcggt tgagtgccac caaaaggggt gagctcctaa ttggagcccg ttccaatggc 1081 gaggtgatcg tcttcggctc aacccgtctg gattgcttta gtggatttca ggtggttgga 1141 gaatcggaac cgagtggcct tctaacccat cgaaacgcga gaaacgaaag ctttctgctg 1201 ttggcctatc gaggagccac cagcgatctt attcgaacag tacagctggg taaattggag 1261 gaaacctcca atcaagtggg cgctgctccg gaagaagatc ttagtgtggt ccaattgcat 1321 cgtcacgaat tcgaagagtc catcaatgcc ttacgtgggc tgctcctgcg ccgtcgttcc 1381 ccgctggaaa ccctgagaaa cctgatcaac tccttgaagc tgagatctgt tattcacctg 1441 gagaaaccac tgcatctcca tgaaaaagga cacattgaac ggctccagct ggtggacgat 1501 cagctgcgca ctcccactca attgaagcag cgtctggagg agcttcgtca gcgatatgaa 1561 tccaggagaa ccacaagatc ttttgggaca gccaatgaaa atgatgccgg agataaactc 1621 aaagtgcgac gattgcgagt gggtaacctc atctaccagg gacagttgat gccagatcac 1681 atcctggata cttctgagcc acctttgctg accatcagaa acagtcgact gctgaccaaa 1741 acactaaaaa cgaagcaact attgaccccg caggattacc acaactccag tgcatccccg 1801 attcctaaac agcccactac taatcgcagt gaatgtgtag tgcgtcacct gaatatcgaa 1861 cagatcaatg gagtgatttg gaatgacttt ttggactccc tcttcctgcg cagccgcgac 1921 actcggttaa gtggaaaact ggtgatgcaa tcgagaaccc gggtgaacag tctaaagacg 1981 actctgctca acggactggt ggtggatcgt ctctttaacc tgcgacgtgc tcaggtgatc 2041 agttcggata tctatatgtc tgcctttttt gcccctcgtc ttgaggctcg gcgggtgaat 2101 ggcttggatt ttgctcagga tgtcctctat cgcggtggca atgctagctg ggtgaagact 2161 cctgttcgca tcaatcagat gagtgtttcg ggtgacattg tggtggccaa tcagggtaaa 2221 ttcaagaaac agtctagaca acccgaagaa tcagaggagc aacgtctgca gcagtactac 2281 acgggcaggg ttacgatccg tggctcactg acggtcagaa atgttcagag ggatacggcg 2341 aactcactcg tagtgctggg caaccaatct ctggccaaga atgatctaca ttccaagtac 2401 ctcctcaacc agacgcaaca gaacctctcc aatttgacct ttggagatgc cagagtcagt 2461 gctccttcac tgaccaccaa cttcattgaa ggacatcccg taagggatca cctgctcagc 2521 ggtggacagc aaaacattca cacccatcca aatcgcactc tacacatcat tttcatgaat 2581 gccaccgtac agggtgatat tatttgcagg gactacgtct cccggttggc ggagatcgcc 2641 aaggatgcag tgcgtcatgg acaggaggcc aatatcacgg gtcacaagcg cttccaggca 2701 cctctaaccg ttcaaagcat tcgaaccgat caaataaatg ggttacccat aacccaactg 2761 gtactcaaat cgaacatcac ccagaatttc aagggaacga agagctttgc ccgcttggtg 2821 gtgacggaag atctaaaggt tcggaagcac ttgaatgtga gtcgtcttaa tggattgcca 2881 ctgcaacagc ttcttggtca tgatgttagc ctgcagcgtc tcgaactgac ggaaatgcca 2941 catctggaga acctccactt ccggcgactc aatggattgc ccttcgatga actgctgtcc 3001 acgatctccg agggaaatga ccagccgcta ctgctccaca agcaactgct tatcgaggga 3061 aatgtgcgat ttgaaaaggc tctgcagctg caggacatca atggaatcca ctgggaggat 3121 tacctgagtc gcctggtaag acccgatgcg aatgctgagc tgcggggaag gaagaccttc 3181 ctggcggatg tccaactgaa cgatgctctt catactcccc acataaataa tctggatctc 3241 agctccctgc tagataatac cctgctacga atgacacccc agcaaattag tggagtctac 3301 agcttcgagc gaatgatggc caccaatgtg gatgtgagcc gaataaatgg ggtaccaaag 3361 gaagagttta tagacacacg gaaggatttg gaactgaagg gggatctcta cctgaagcag 3421 ctcaacatca gtggcagcct aaaaggcacc tttgccaagg acccaggact aagtgatctt 3481 aaggaaagag taaagcgagt gcagcaactt ccctggcgga atctaatagt caccgtcgat 3541 gctctgtggg atgaaggtgc aggccaatcc caatcaccac tggattatct ccgccagcat 3601 gccgtaagaa aggtgggaaa tcagacgatt acaggacatg tgctcctaaa agaaccccat 3661 ttcaagaacc tccaaagcga gcagtccctg cccatcgaac tcaaccttac ttacttggcc 3721 gaagatgccc tactgcgacg gagtgccacc aacgaaagcc aggtgatcct ggctccccag 3781 aagctgctgg gattagttag ggccggaagc ctgcatctcg aaaaggatgc acactttggg 3841 ctggtgaacg gaatcgatat tgaacgactc aatgcctcac tgtaccgcct ctccagtgga 3901 gaagccattg cagcggatct tcacttcctg cagtcgcccc ggattggtaa acttcaactg 3961 gaggttccgg aagtgaatgg gcatccaatt gagagcattt accagcaggg caaagggcaa 4021 tcctggccag ctgtgaggtt caaacaactg gtcgttgaaa aggatctcaa cctgggaagt 4081 gtaaacgaga tgagtctgga ctacttcctg cagcaccgca taaccttgag aggacctgct 4141 ttggaggtat ttggatccct gagcttcgaa catctccagt tggacggtcg accgctcctt 4201 cgttccatca atggcattcc gttggacaat gtggtgtttc gacacagcaa tcaggcgcag 4261 agcatcacgg gtgtgaagac ctttcatgga ggtgtgcact tcacaggacc cggacatgtg 4321 atgaatctaa atggtcggga tcttagcgac agctttaggg gcagcatctt ccgcaacaga 4381 gactacaata tcgatagttt ggttcttgac agagccagct tcccaggagg tcttgttttg 4441 gcgggaagtc agagtcccag tcgaatgcga acgatggagg tccctcaaga aaatcagttg 4501 gaggaattgc aggagctttt aacattgggt aatcaaagct cttacaagag acttctttac 4561 ctcgaccatg atcttgaaac tctggaatct acttgggtga aaccgccgct aaggggatct 4621 cccgaggatc ccgaggctaa ccttccccta ggcgacgctg ctccctgtca gcgtcgcagt 4681 ttgcaggctc atcttcggat ctcccagcgc cttgtgctcc tcgccaatgt cagtgtgtcc 4741 agccaactaa tgcgactcaa ttccggcaat gtccgtgtca aagtgcagaa ccactgtcac 4801 cttccagcca ggaaattgcg cagtaggatt agccttagtt gccgcaacga atcgcatgtg 4861 ctcgcaatgc gtcaacctgt ggaggcaatg gaactaataa cccgggaagg ggaggagatc 4921 ctacttttgg gcaccgagga ggaggttcgt gtcttgcggc tgaaggggag taactgcagt 4981 ctcatcgact ggcaatccat cctcccagcg gatggtcgtc taatgaaggt gatccaaatg 5041 gagattgaac ctaacgagga tctactactc accagtggtt tgagcaatca tcgtcctgtg 5101 ctggccattc atgtgaggga tctcgcgagt cagaacttca aattgatcca gttgataccg 5161 ggctcttacg atttggccga gatgcaggga aatcaattgc tagccagctg cctgggttgc 5221 cgacacgtag ccatctttaa acgaaaccaa accctcttcg aagccatcca gcaattgagt 5281 ttccaggagc gcatccatca gctaaccccg tttaatgtgg gagaagagca atatcttctg 5341 gtgataacgc aacccgagga ggatcacttt tacctcttcg tctacaatca agtgggcggt 5401 tggcagcaac gcacatttgg ctctaaaaat caataccagt gggcgtggcc attggtgaaa 5461 tctggtcaaa aactggaggc ggtagagagc ccaattatgc tgctctgcgg aagggaaaag 5521 aaatgcagtc tagtgaaagc cctacttggc taaaatctgt accatattgt taactatgtt 5581 tagttttatt tactgtatat atcctatgtt tatgctatga attgtttagt tttgttaaat 5641 cataa