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LOCUS XM_017153799 3126 bp mRNA linear INV 09-DEC-2024 (LOC108065687), transcript variant X1, mRNA. ACCESSION XM_017153799 VERSION XM_017153799.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153799.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3126 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3126 /gene="LOC108065687" /note="protein bric-a-brac 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065687" CDS 511..2565 /gene="LOC108065687" /codon_start=1 /product="protein bric-a-brac 1 isoform X1" /protein_id="XP_017009288.2" /db_xref="GeneID:108065687" /translation="MLPQQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRA HRVVLCACSTFFDAVLSNYASERDPIIIMKDVTFAEVKCLIEFMYKGEINVEHASLPS LLKTADDLKIKGLAEVTWRDDEDGPPPPMAAAEFHSPPRSLAESYAQDLILQHQQQQQ PPAGPPLHLHSSAILDRDREQRDRDRERLSPGMESVLGRMPVMTPLPGAAGSAGVGAI SGATALEGVAPVEHFLGPKRKRGRPPLDDAYDVFNVRKLAQYAANLEPAQRAYLETAR HFAEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQQQQQQLLQSETSDQEPSVA GQDWSSSEPNGRCTPKNPGDGDDNKQETEAGEESQPDVLTSTSSSAKKLEKISERRER HGKLRHARRLYEKSGGGGGAGGGEEVESPPKEEPDELPQPLEEIENEHLVANRAESPR PTVVIPASFACKYEGGVAAGGGGGSSGSSSYLINEHGMLMAHEFAPNVASAAATAAVA VAAAAAAVANASAGSGSQDPGGSGGAGSSADYPDIKLEDYDAAELRLTNEELSQWQDV IKMDDYLAKGRRPQFWEEPFTKRVLDAIKNKRLEMKKAARILGVSYGTLYGRYREVYG CLKHPYSGTAFRNSGSTSASQLGVQPRFDLGFRNGGVLPAQLELGKLKKDLSELWTRP QI" misc_feature 598..852 /gene="LOC108065687" /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster proteins bric-a-brac 1 (BAB1), bric-a-brac 2 (BAB2), modifier of mdg4 (doom), and similar proteins; Region: BTB_POZ_BAB-like; cd18315" /db_xref="CDD:349624" misc_feature 2275..2382 /gene="LOC108065687" /note="helix-turn-helix, Psq domain; Region: HTH_psq; pfam05225" /db_xref="CDD:283007" polyA_site 3126 /gene="LOC108065687" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgatagtct taacttagac gcgcttcatt gcagtcaaaa gccagatact gcggttaaaa 61 gttgaaacca taacaaaaca tgaacaaaat attctaaaat attaaaaaag aaaaagacac 121 tttagttttg gagttttggt aatattttgc aagacaattt aatgacaatt ttgtggttgg 181 tgtcaaataa ttacaatatt ccaagtgttt accgttaacc gcacaaaaaa agcgcgcgat 241 ttgaatttcc tgtttttttt caagttaacc aaaagcaaaa acaaatgata taaaaatgta 301 tgaatgaatg aatttttttc gccaaaatct gctgcgtgtg caattcaatt cgaataacaa 361 aacaaaaaaa caaagaaagg caaaaaaata aacgaaaaga aaagataccg cgaaaagtca 421 taaagaaaag gcaaggagag gacctccagt agaattacta gaaccaccag aggcaccacc 481 atcaggggca gcagcaggcg cggcaccacc atgctgccgc agcagtactg cctgaggtgg 541 aagtaccacc atagcaatct gcagaccatg ttctcccagc tcctggatcg cggctgcttc 601 tgcgacgtga ccttggcctg cgagggccag ctcatccgcg cccaccgcgt cgtcctgtgc 661 gcctgcagca ccttcttcga cgccgtgctc tccaactatg ccagcgaacg cgatccgatc 721 atcatcatga aggacgtgac cttcgcggag gtcaagtgcc tcatcgagtt catgtacaag 781 ggcgaaatta atgtggagca tgccagcctc ccttcactgc taaagaccgc ggacgacctg 841 aagatcaagg gtctggccga ggtcacctgg cgcgacgacg aggacggtcc gccgccaccg 901 atggccgccg cggagttcca ttcgccgcca cgcagtctgg cggagagcta cgcccaggac 961 ctaatcctcc agcaccaaca gcagcagcag cccccggctg gtccgccctt gcacctgcac 1021 agctctgcca ttttggacag ggatcgtgag caacgggatc gcgatcggga gcgcctgtcc 1081 ccgggaatgg agagtgtgct gggtcgcatg cccgtgatga cgccgctgcc gggtgccgcc 1141 ggctcagccg gagtgggtgc gatatccggg gccacagccc tcgagggcgt cgcacccgtc 1201 gagcactttt tgggccccaa acgcaagcgg ggtcgtccgc cactagacga cgcatacgat 1261 gtgttcaacg tacgcaagct ggcccagtat gccgccaacc tggagcccgc ccagcgtgcc 1321 tatttggaga cggcgcgtca cttcgccgag gagcctccgc tggcggccca tgccgcctcg 1381 atggcctccc cgcccgccgc ctgcccgccc aaacagcgcc agcgcctacg tcaccagcag 1441 cagcagcagc aacagcagca gcagcagcag ctcctccagt cggaaaccag tgaccaggag 1501 ccatcggttg ctggccagga ttggtccagt tcggagccca atggcagatg cacgcccaag 1561 aaccctggcg atggcgatga caacaagcag gaaacggaag ccggcgagga atcgcaaccg 1621 gatgtgctga ccagcacaag cagttccgcc aagaagctgg agaagatcag cgagcggcgc 1681 gaacgtcatg gcaagctgcg tcatgcccga cggctgtacg agaagtccgg aggaggagga 1741 ggggcaggag gaggggagga ggttgagtcg ccgccgaagg aggagcccga cgagctgccg 1801 cagccgctgg aggagattga gaatgagcat ctggtggcga acagggcgga atcgccacgt 1861 cccacggtcg tgattccggc cagttttgcc tgcaaatacg aggggggcgt ggcagccgga 1921 ggaggcggtg gatcgagtgg ctcttcctcc tatttgatca acgaacacgg catgctgatg 1981 gcccacgaat ttgcaccgaa tgtggccagt gccgcggcca ccgctgccgt tgccgttgca 2041 gcagccgccg ccgccgtggc aaatgcctca gccggaagtg gaagccagga tccaggcggc 2101 agtggcggtg ccggctcctc cgccgactat cccgacatca agctggagga ctacgatgcc 2161 gccgaactgc gcctgaccaa cgaggagctg tcgcagtggc aggacgtcat caagatggac 2221 gactatctgg ccaaggggcg gcgtccacag ttctgggagg aaccctttac caagcgtgtg 2281 ctggatgcca ttaaaaacaa aagactcgag atgaaaaagg ccgccagaat tctgggcgtt 2341 tcctacggca ctctttatgg gcgttaccgc gaggtatatg gctgcctgaa gcatccttac 2401 agtggcaccg ccttccgtaa ctcgggatcc acctcggcca gccagttggg agttcagccg 2461 cgcttcgact tgggattccg caacggagga gtcctgccag ctcagctgga gctgggcaag 2521 ctgaagaagg atctgagcga gctatggaca cgtccgcaga tttgaggacc aaccaatgcc 2581 accaccacca ccacaactat gaagaaactg cagaaaaatc tcaaacgacg ccacaagctg 2641 atctaggatc acaaggataa aagacagcta gacgaggcta gttttagatc ccgaagaaga 2701 aaaaacaaac actttcctga atcgattccc actttaattt gttgcacccc tctcgggtcg 2761 caactataac tgatcttcta cacatttagg atcttattat tacataatat aatatactat 2821 ataaatacat gtctatatat atacatttaa agccgacgca cgcgtggatt agttaattga 2881 aatacatatt ataaacacac acacacgggc acgtgttgtt ctagagataa atacatttct 2941 cttggtagtg aaattaaaac gaaaataaac tatggaatct agttaatcaa taacatacaa 3001 caaaagtgaa gtgaattttt tgataagcta aaacgaacac aaacaatatg tattacatac 3061 aaaaagaaat atgtttaaaa cgaaataaaa tattatctat gaaaaatatg tttaaaacga 3121 aataaa