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LOCUS XM_017153795 2943 bp mRNA linear INV 09-DEC-2024 zydeco (zyd), transcript variant X2, mRNA. ACCESSION XM_017153795 VERSION XM_017153795.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153795.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2943 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2943 /gene="zyd" /note="sodium/potassium/calcium exchanger zydeco; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108065685" CDS 876..2498 /gene="zyd" /codon_start=1 /product="sodium/potassium/calcium exchanger 3 isoform X1" /protein_id="XP_017009284.2" /db_xref="GeneID:108065685" /translation="MEDYWGLSSTTDINCTQPAIDDFPRDLFSEAQRQSGAVVLHVIA SLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAATSAPELFVNVIGTFIT EGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRDSIAYGVTVAILICVMH DERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKGGVKQARSRSRSSNCSIHTKNSNE KEPELVENRICQNMANIQLNGGLNNDPPKATGTTSGGTTTISITTSAMTTAIGTTTHS VGAEGEGGRAAGDVPSEPGSIALMAQMDGGEAESQLAVAAADEDREEEGYSLLTYPKD KSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMIT IIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCL GVPWLIKAVFFPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGT ACLVMYLVFMVFASLIELNVFFRVNLPTCGRS" misc_feature <939..2450 /gene="zyd" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" polyA_site 2943 /gene="zyd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtcggcggca tcaagacaat atacacacaa caacacaagc caaaccatat caaccaatta 61 aaaaaaaaac ataaatatag aggaagagaa gcagagatac taatcgcaac attttcgaca 121 gcgaacaagg aacgagaacg gaaacgatta cgaaaagatc gagattaatg tcagcgagta 181 caaagacgcg agtaaacgcg gatcgtaacg aattaaaacg gaacaaaacg ggaagaaacg 241 caaaaaacgc tgcgtaacgg gatatgcctt agtgtttttg ttgttgtgcc gtaaccttta 301 agtgagagtg tcaagagcaa ggtccagaac aaaagagata gatactgcag tcggacttct 361 actgctcgaa acccctaatc ttagacctaa ttaatctgaa cttcgaagtg tactatattt 421 aaaatatgtt tatttaaaga ctgcttagac tcacgaaacg aaatacaaag gtttcataac 481 cccaggagag taacacaaag tattttcttt ccggcggtaa aaggaaatag atttttgtgt 541 ctcgccgatt acatgagttt acaaaataaa atcgggaact caacgtgcca ttgtggaact 601 ggatctttag aacaaattga gataactctc gccgtctcac ttaagccgag ctgaaaagag 661 actgaagcca aaggaaaaga gatcatagaa aataaagaaa agcaaaagaa acgtgaataa 721 aagaaaggcg cgggaggcga gagaaacgcg aaaagaaaac ggcaaaggaa agaaagagaa 781 aatcaacacc attgaagtgg ggattgagat tgcgcttcat acaacggcgc atcgcagttt 841 acgagtgtcc atcaccacta caacaccgtg cagcaatgga agactattgg ggtcttagca 901 gcactacgga tataaattgc actcagcccg ccatcgacga cttccccagg gatcttttct 961 cggaggcgca aaggcagtcc ggtgctgttg tacttcatgt tatagccagt ttatatttat 1021 tcgtagcctt agccgtagtg tgtgatgagt acttcgtgcc agcagttgag aaaatatgtg 1081 cagcactcaa catgtccaat gatgtggcgg gggccacgtt catggctgcg gccacctccg 1141 ccccagagct gtttgttaac gtgataggca cctttatcac ggagggtgat atcggagtgg 1201 gcacgattgt cggatcggcg gtatttaaca tcctggcagt cgccgcctgt tgcggaattg 1261 gagctggaat gactataccc ctggactggt ggccgttgac acgggacagt attgcctacg 1321 gagttacagt ggccattctc atctgtgtga tgcacgacga gcgcgtcgag tggtacgaag 1381 ccctcatcct ggtctccctg tacgccgtct acctggcggt catgtatttc gacaaaacgt 1441 tccaaaagtg cgccaaaggt ggcgtaaagc aggcgcgttc gcgcagccgg tcctccaact 1501 gcagcataca cacaaaaaac agcaatgaga aggaaccaga gctcgtggaa aatcgtatat 1561 gccagaacat ggctaacatt cagctgaacg gaggactaaa caatgacccg ccgaaggcta 1621 caggcaccac cagtggcggc actaccacca tttcgatcac cacctcagcc atgaccaccg 1681 cgataggcac caccacgcac agtgtcggag ctgaaggaga aggaggaagg gcggcaggtg 1741 atgttccttc tgaaccgggc tccattgccc ttatggcaca aatggacggt ggcgaggcag 1801 agtcccagct agctgtggct gccgctgatg aggatcgcga ggaagagggc tactccctgc 1861 tcacataccc gaaggataag agctgttttg cacagtttac ctggctcatt atctggccga 1921 ttcatctcct atttcgcatc gccatccccg actgcaagaa ggccaagaac aacaagattt 1981 tcccgcttac cttcataatg tgcatcgtct ggataggatc gctgtcttac gtggttgcgt 2041 ggatgataac cattatcggt gatacactta agatacctga ctcggtgatg gggattacat 2101 tcctggcggc tggaactagc gttcccgaag ctgtatccag tgtgatcgtg gcgaagcgtg 2161 gtcacggatc gatggggatc tgcaactcaa ttgggtcaaa caccttcgac atcctgctgt 2221 gcctgggggt tccctggcta atcaaagctg tcttctttcc gatccaaccg ggacagaact 2281 acgtggccat aaactcggct ggattggagt actcggcgat cactttgctg tcgacgctgt 2341 ttctgctgta tctaacgttc tccacaaaca agttcaaatt ggacaagaag gtgggcaccg 2401 cctgtctggt gatgtacctg gttttcatgg ttttcgcctc cctcatcgaa ctcaacgtgt 2461 tcttccgcgt taacctgccc acatgcggtc gatcatgaga tggatctgta tccgatgata 2521 gcgcgatata cgaaggccga cttgtggagt atgaggtgtg gatgaacgat tcaccatttt 2581 gaatgaatgg atggagtgta gaaaggccag tcatctagtg ctggttccgt tttccgattc 2641 agtttccggc agctggctgg agtgcagtcg tttaattaat taatatgaat tttctgttct 2701 attctatctt cctcgatagt tgagttacgt tatacgttat gctgttattg taataatact 2761 ttttttttta ttattattat taaagtagac tctttcacaa ccttcggtta gaaaccaaat 2821 gaaaaattga aaatagatga gaagatatga aaagaaatta aagggcgaaa cacaaaacca 2881 aaaccacact aaaaaattta ataatgtatt tatatgatta atatatatga gatttaacaa 2941 aga