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LOCUS XM_017153781 2965 bp mRNA linear INV 09-DEC-2024 (DIP-beta), transcript variant X5, mRNA. ACCESSION XM_017153781 VERSION XM_017153781.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153781.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2965 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2965 /gene="DIP-beta" /note="Dpr-interacting protein beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108065677" CDS 341..1933 /gene="DIP-beta" /codon_start=1 /product="neurotrimin isoform X5" /protein_id="XP_017009270.2" /db_xref="GeneID:108065677" /translation="MMNLLVVKESGERIADISCSQEHNRTETQPNPRRIANHRSRKLA QLEISSGSGGSGTGNGSGSGSGSGSGCGPAFRWQLLLLLLLCNCIVGAFEPDFVIPLE NVTIAQGRDATFTCVVNNLGGHRVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTW TLNIRSVKMEDAGKYMCQVNTDPMKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKL VCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCI ASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQREN GEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIGDTEGTIRLYE MERPGTQKKIRDDDLNEVSKNEVVQKDTRSEDGSRNLNGRLYKDRAPDQHPASGGDPV LLVRGPRRLIGIFLLALLVLLTAMAEAGPTTLFCRTKGGRQKNAGATSLNGRRQDMKD KKWSKFWERSARSWSSGAKAAE" misc_feature 644..919 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 674..688 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409549" misc_feature 713..727 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409549" misc_feature 806..832 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409549" misc_feature 860..877 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409549" misc_feature 929..1219 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 986..1000 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 1025..1039 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 1112..1126 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 1154..1171 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 1196..1207 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 1277..1513 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 1280..1294 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:143207" misc_feature 1319..1336 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:143207" misc_feature 1391..1426 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:143207" misc_feature 1454..1471 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:143207" misc_feature 1493..1504 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:143207" ORIGIN 1 aaagaaaaag aagaaaagaa gagttttttt tgcccagtgt tggttgatta ttttccaagt 61 ttttttcgag tgttggccag tgctttggac ccgtttggtt tctcctcagg ttttttcgaa 121 aaaaaaaggt aattctgaaa actgaaactt aatcgtttgc cgctggaaat tcaatgtgag 181 ttgtggctgt gtcaatcccc ttctcaatca tcccgttacc cgtcgatcgc cgccttcaat 241 cattcaatca cacacgcttg ttcactcagt tgtcaattgc attatcgcat ctcaaagtaa 301 acaccgctaa aggcatacca atggaagcta ggacagtctt atgatgaact tgctggtggt 361 caaggaaagc ggcgagcgga tcgccgacat cagctgtagc caagagcata atagaaccga 421 aactcagcca aatcccagac gaatagccaa tcatcgcagt cgcaagctgg cgcaacttga 481 gatttcatcg ggatcgggag gatctggaac cggaaatgga agtggaagtg gaagtggaag 541 cgggagcgga tgtggacctg cctttcggtg gcaattgctt ctactcctac tgctctgcaa 601 ttgcattgtg ggcgccttcg agccggactt tgtgattccg ctggagaacg tgaccatcgc 661 ccaaggtcgg gacgcgacct ttacgtgcgt tgtgaacaac cttgggggtc atcgggtcgc 721 ctggattaag gccgatgcca aggcaattct ggccattcac gagcacgtga taaccaacaa 781 tgatcgatta tcggtgcagc acaacgacta caacacatgg acgctcaaca tacgcagcgt 841 caaaatggag gatgccggca aatacatgtg tcaggtcaac acggatccca tgaagatgca 901 gaccgccacc ttagaggtgg tcattccgcc ggacatcatc aacgaagaga cctctggaga 961 tatgatggtt cccgagggcg gatccgccaa gctcgtctgc cgagcacgcg gtcatcccaa 1021 acccaagatc acgtggcgac gcgaggacgg cagggagatc attgcccgca atggctcgca 1081 ccagaaaaca aaagcccaat cggtggaggg tgaaatgctg acgctgtcga agatcacgcg 1141 atcggaaatg ggcgcctaca tgtgcatcgc ctccaacgga gtgccgccga cggtgagcaa 1201 gcggatgaag ctacaggtgc actttcatcc actggtgcaa gtgccaaatc aattggttgg 1261 cgcccccgtc ctcacggatg tcacattaat ttgcaatgtc gaggcatcgc cgaaggccat 1321 caattattgg cagcgcgaga atggtgaaat gattattgcc ggcgatcgtt atgcgctcac 1381 cgaaaaggag aataatatgt acgccatcga gatgattctg cacatcaaac gactgcaatc 1441 gagcgatttc ggcggctaca agtgcatctc caaaaatagc atcggcgaca ccgagggcac 1501 catccggctt tatgaaatgg agcgacccgg cactcagaaa aaaattcgtg atgatgatct 1561 caacgaagtg tcgaagaacg aggtggtgca aaaggacacg cgcagcgagg acgggtcacg 1621 caacctgaac ggaaggctct acaaggaccg ggctccggat cagcacccgg ccagcggggg 1681 cgaccccgtg ctcctcgtcc gaggaccaag gcggctaatc ggtatatttc tattagcctt 1741 attggtttta ttaacggcaa tggcggaggc cgggccaacc acattgttct gccgcacaaa 1801 gggcggcaga caaaagaatg ccggggcaac gagtttgaat gggcggcggc aggatatgaa 1861 ggataagaag tggagcaagt tctgggaaag atcagcgcgg agttggagca gcggggcgaa 1921 ggcggcagag taagattatt atagcttaat tcaattgtaa ttatacaaac aagattatga 1981 tgcaaggagc tcctgcccca catccacaca aaagagggca ttaatcaccc ccctaatcat 2041 ctacgcccat gctaattgca aagggggtgg ttaggagggt ggttaagggg gcagggctaa 2101 ttgaatgcat attaaatcaa aaggaggaag gagaaactaa agtgtcgtag ttaagtggaa 2161 aagaaaacgc gtttaaatgt tacctcgtta gtggaaaatg atgatggaaa ggatgaaggc 2221 cccagtccca caaaaggaaa gtcaactata aacaatattg agattaaaaa tggtgttcgg 2281 ttctttaaaa ggctttagct actctgaagt gaaaacagaa aaacaaaaaa aaaaacagta 2341 tgatacggta atggacattg atatggatat ttctagatgt ctaaagaata agtcaggttt 2401 ttttttgcgt tcattcaaaa cttaattcgt tgggttttct agaagaaata tacgcataca 2461 taaacgcatc tgtatgtatt aagtgtttaa tggaaagagt tctgtatata tatttaaggc 2521 ctgctcaaag agaaggaaaa tttatggcta aaggggaaaa tgtttagacg atctttgcaa 2581 actgtaaata tttataacct tagtgatccc gaactattgt agttttgttg ttatcatgga 2641 aaaatggctc tattttttgg cccctctgtt gtcaccttcg ttctcacggc tcaaaagact 2701 aatgcggacc ctaggcttaa gccaattttg gaaaccccta agacattaat ccgctaaaac 2761 tgtgtgtgtg tgatttttag ctttaaaaat taaacaccga gttgaaatat aaaaaaaaaa 2821 atttaaggca tgccatttat gttcctcata gacccttcgg tgtgctgagt tcgaatctgg 2881 ccataaaaat ggaaaaaatc cacctcaaag ttagaagcat tatctacata atttgattat 2941 ctgtggtagt ttagaattca gcaaa