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LOCUS XM_017153780 2995 bp mRNA linear INV 09-DEC-2024 (DIP-beta), transcript variant X4, mRNA. ACCESSION XM_017153780 VERSION XM_017153780.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153780.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2995 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2995 /gene="DIP-beta" /note="Dpr-interacting protein beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065677" CDS 341..1963 /gene="DIP-beta" /codon_start=1 /product="neurotrimin isoform X4" /protein_id="XP_017009269.2" /db_xref="GeneID:108065677" /translation="MMNLLVVKESGERIADISCSQEHNRTETQPNPRRIANHRSRKLA QLEISSGSGGSGTGNGSGSGSGSGSGCGPAFRWQLLLLLLLCNCIDLTVSNKISSVGA FEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVAWIKADAKAILAIHEHVITNNDRL SVQHNDYNTWTLNIRSVKMEDAGKYMCQVNTDPMKMQTATLEVVIPPDIINEETSGDM MVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKIT RSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEASP KAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIG DTEGTIRLYEMERPGTQKKIRDDDLNEVSKNEVVQKDTRSEDGSRNLNGRLYKDRAPD QHPASGGDPVLLVRGPRRLIGIFLLALLVLLTAMAEAGPTTLFCRTKGGRQKNAGATS LNGRRQDMKDKKWSKFWERSARSWSSGAKAAE" misc_feature 674..949 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 704..718 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409549" misc_feature 743..757 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409549" misc_feature 836..862 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409549" misc_feature 890..907 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409549" misc_feature 959..1249 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1016..1030 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 1055..1069 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 1142..1156 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 1184..1201 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 1226..1237 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 1307..1543 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 1310..1324 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:143207" misc_feature 1349..1366 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:143207" misc_feature 1421..1456 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:143207" misc_feature 1484..1501 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:143207" misc_feature 1523..1534 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:143207" ORIGIN 1 aaagaaaaag aagaaaagaa gagttttttt tgcccagtgt tggttgatta ttttccaagt 61 ttttttcgag tgttggccag tgctttggac ccgtttggtt tctcctcagg ttttttcgaa 121 aaaaaaaggt aattctgaaa actgaaactt aatcgtttgc cgctggaaat tcaatgtgag 181 ttgtggctgt gtcaatcccc ttctcaatca tcccgttacc cgtcgatcgc cgccttcaat 241 cattcaatca cacacgcttg ttcactcagt tgtcaattgc attatcgcat ctcaaagtaa 301 acaccgctaa aggcatacca atggaagcta ggacagtctt atgatgaact tgctggtggt 361 caaggaaagc ggcgagcgga tcgccgacat cagctgtagc caagagcata atagaaccga 421 aactcagcca aatcccagac gaatagccaa tcatcgcagt cgcaagctgg cgcaacttga 481 gatttcatcg ggatcgggag gatctggaac cggaaatgga agtggaagtg gaagtggaag 541 cgggagcgga tgtggacctg cctttcggtg gcaattgctt ctactcctac tgctctgcaa 601 ttgcattgat cttaccgttt cgaacaaaat ctcctcagtg ggcgccttcg agccggactt 661 tgtgattccg ctggagaacg tgaccatcgc ccaaggtcgg gacgcgacct ttacgtgcgt 721 tgtgaacaac cttgggggtc atcgggtcgc ctggattaag gccgatgcca aggcaattct 781 ggccattcac gagcacgtga taaccaacaa tgatcgatta tcggtgcagc acaacgacta 841 caacacatgg acgctcaaca tacgcagcgt caaaatggag gatgccggca aatacatgtg 901 tcaggtcaac acggatccca tgaagatgca gaccgccacc ttagaggtgg tcattccgcc 961 ggacatcatc aacgaagaga cctctggaga tatgatggtt cccgagggcg gatccgccaa 1021 gctcgtctgc cgagcacgcg gtcatcccaa acccaagatc acgtggcgac gcgaggacgg 1081 cagggagatc attgcccgca atggctcgca ccagaaaaca aaagcccaat cggtggaggg 1141 tgaaatgctg acgctgtcga agatcacgcg atcggaaatg ggcgcctaca tgtgcatcgc 1201 ctccaacgga gtgccgccga cggtgagcaa gcggatgaag ctacaggtgc actttcatcc 1261 actggtgcaa gtgccaaatc aattggttgg cgcccccgtc ctcacggatg tcacattaat 1321 ttgcaatgtc gaggcatcgc cgaaggccat caattattgg cagcgcgaga atggtgaaat 1381 gattattgcc ggcgatcgtt atgcgctcac cgaaaaggag aataatatgt acgccatcga 1441 gatgattctg cacatcaaac gactgcaatc gagcgatttc ggcggctaca agtgcatctc 1501 caaaaatagc atcggcgaca ccgagggcac catccggctt tatgaaatgg agcgacccgg 1561 cactcagaaa aaaattcgtg atgatgatct caacgaagtg tcgaagaacg aggtggtgca 1621 aaaggacacg cgcagcgagg acgggtcacg caacctgaac ggaaggctct acaaggaccg 1681 ggctccggat cagcacccgg ccagcggggg cgaccccgtg ctcctcgtcc gaggaccaag 1741 gcggctaatc ggtatatttc tattagcctt attggtttta ttaacggcaa tggcggaggc 1801 cgggccaacc acattgttct gccgcacaaa gggcggcaga caaaagaatg ccggggcaac 1861 gagtttgaat gggcggcggc aggatatgaa ggataagaag tggagcaagt tctgggaaag 1921 atcagcgcgg agttggagca gcggggcgaa ggcggcagag taagattatt atagcttaat 1981 tcaattgtaa ttatacaaac aagattatga tgcaaggagc tcctgcccca catccacaca 2041 aaagagggca ttaatcaccc ccctaatcat ctacgcccat gctaattgca aagggggtgg 2101 ttaggagggt ggttaagggg gcagggctaa ttgaatgcat attaaatcaa aaggaggaag 2161 gagaaactaa agtgtcgtag ttaagtggaa aagaaaacgc gtttaaatgt tacctcgtta 2221 gtggaaaatg atgatggaaa ggatgaaggc cccagtccca caaaaggaaa gtcaactata 2281 aacaatattg agattaaaaa tggtgttcgg ttctttaaaa ggctttagct actctgaagt 2341 gaaaacagaa aaacaaaaaa aaaaacagta tgatacggta atggacattg atatggatat 2401 ttctagatgt ctaaagaata agtcaggttt ttttttgcgt tcattcaaaa cttaattcgt 2461 tgggttttct agaagaaata tacgcataca taaacgcatc tgtatgtatt aagtgtttaa 2521 tggaaagagt tctgtatata tatttaaggc ctgctcaaag agaaggaaaa tttatggcta 2581 aaggggaaaa tgtttagacg atctttgcaa actgtaaata tttataacct tagtgatccc 2641 gaactattgt agttttgttg ttatcatgga aaaatggctc tattttttgg cccctctgtt 2701 gtcaccttcg ttctcacggc tcaaaagact aatgcggacc ctaggcttaa gccaattttg 2761 gaaaccccta agacattaat ccgctaaaac tgtgtgtgtg tgatttttag ctttaaaaat 2821 taaacaccga gttgaaatat aaaaaaaaaa atttaaggca tgccatttat gttcctcata 2881 gacccttcgg tgtgctgagt tcgaatctgg ccataaaaat ggaaaaaatc cacctcaaag 2941 ttagaagcat tatctacata atttgattat ctgtggtagt ttagaattca gcaaa