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LOCUS XM_017153779 2998 bp mRNA linear INV 09-DEC-2024 (DIP-beta), transcript variant X3, mRNA. ACCESSION XM_017153779 VERSION XM_017153779.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153779.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2998 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2998 /gene="DIP-beta" /note="Dpr-interacting protein beta; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108065677" CDS 341..1966 /gene="DIP-beta" /codon_start=1 /product="neurotrimin isoform X3" /protein_id="XP_017009268.2" /db_xref="GeneID:108065677" /translation="MMNLLVVKESGERIADISCSQEHNRTETQPNPRRIANHRSRKLA QLEISSGSGGSGTGNGSGSGSGSGSGCGPAFRWQLLLLLLLCNCIVGAFEPDFVIPLE NVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPVKVAWIKADAKAILAIHEHVITNNDR LSVQHNDYNTWTLNIRSVKMEDAGKYMCQVNTDPMKMQTATLEVVIPPDIINEETSGD MMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKI TRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEAS PKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSI GDTEGTIRLYEMERPGTQKKIRDDDLNEVSKNEVVQKDTRSEDGSRNLNGRLYKDRAP DQHPASGGDPVLLVRGPRRLIGIFLLALLVLLTAMAEAGPTTLFCRTKGGRQKNAGAT SLNGRRQDMKDKKWSKFWERSARSWSSGAKAAE" misc_feature 623..958 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 674..688 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409366" misc_feature 746..760 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409366" misc_feature 851..865 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409366" misc_feature 893..910 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409366" misc_feature 935..946 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409366" misc_feature 962..1252 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1019..1033 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 1058..1072 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 1145..1159 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 1187..1204 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 1229..1240 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 1310..1546 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 1313..1327 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:143207" misc_feature 1352..1369 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:143207" misc_feature 1424..1459 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:143207" misc_feature 1487..1504 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:143207" misc_feature 1526..1537 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:143207" ORIGIN 1 aaagaaaaag aagaaaagaa gagttttttt tgcccagtgt tggttgatta ttttccaagt 61 ttttttcgag tgttggccag tgctttggac ccgtttggtt tctcctcagg ttttttcgaa 121 aaaaaaaggt aattctgaaa actgaaactt aatcgtttgc cgctggaaat tcaatgtgag 181 ttgtggctgt gtcaatcccc ttctcaatca tcccgttacc cgtcgatcgc cgccttcaat 241 cattcaatca cacacgcttg ttcactcagt tgtcaattgc attatcgcat ctcaaagtaa 301 acaccgctaa aggcatacca atggaagcta ggacagtctt atgatgaact tgctggtggt 361 caaggaaagc ggcgagcgga tcgccgacat cagctgtagc caagagcata atagaaccga 421 aactcagcca aatcccagac gaatagccaa tcatcgcagt cgcaagctgg cgcaacttga 481 gatttcatcg ggatcgggag gatctggaac cggaaatgga agtggaagtg gaagtggaag 541 cgggagcgga tgtggacctg cctttcggtg gcaattgctt ctactcctac tgctctgcaa 601 ttgcattgtg ggcgccttcg agccggactt tgtgattccg ctggagaacg tgaccatcgc 661 ccaaggtcgg gacgcgacct ttacgtgcgt tgtgaacaac cttgggggtc atcgggtgag 721 tggtgacggt tcgtcagccc cagtcaaggt cgcctggatt aaggccgatg ccaaggcaat 781 tctggccatt cacgagcacg tgataaccaa caatgatcga ttatcggtgc agcacaacga 841 ctacaacaca tggacgctca acatacgcag cgtcaaaatg gaggatgccg gcaaatacat 901 gtgtcaggtc aacacggatc ccatgaagat gcagaccgcc accttagagg tggtcattcc 961 gccggacatc atcaacgaag agacctctgg agatatgatg gttcccgagg gcggatccgc 1021 caagctcgtc tgccgagcac gcggtcatcc caaacccaag atcacgtggc gacgcgagga 1081 cggcagggag atcattgccc gcaatggctc gcaccagaaa acaaaagccc aatcggtgga 1141 gggtgaaatg ctgacgctgt cgaagatcac gcgatcggaa atgggcgcct acatgtgcat 1201 cgcctccaac ggagtgccgc cgacggtgag caagcggatg aagctacagg tgcactttca 1261 tccactggtg caagtgccaa atcaattggt tggcgccccc gtcctcacgg atgtcacatt 1321 aatttgcaat gtcgaggcat cgccgaaggc catcaattat tggcagcgcg agaatggtga 1381 aatgattatt gccggcgatc gttatgcgct caccgaaaag gagaataata tgtacgccat 1441 cgagatgatt ctgcacatca aacgactgca atcgagcgat ttcggcggct acaagtgcat 1501 ctccaaaaat agcatcggcg acaccgaggg caccatccgg ctttatgaaa tggagcgacc 1561 cggcactcag aaaaaaattc gtgatgatga tctcaacgaa gtgtcgaaga acgaggtggt 1621 gcaaaaggac acgcgcagcg aggacgggtc acgcaacctg aacggaaggc tctacaagga 1681 ccgggctccg gatcagcacc cggccagcgg gggcgacccc gtgctcctcg tccgaggacc 1741 aaggcggcta atcggtatat ttctattagc cttattggtt ttattaacgg caatggcgga 1801 ggccgggcca accacattgt tctgccgcac aaagggcggc agacaaaaga atgccggggc 1861 aacgagtttg aatgggcggc ggcaggatat gaaggataag aagtggagca agttctggga 1921 aagatcagcg cggagttgga gcagcggggc gaaggcggca gagtaagatt attatagctt 1981 aattcaattg taattataca aacaagatta tgatgcaagg agctcctgcc ccacatccac 2041 acaaaagagg gcattaatca cccccctaat catctacgcc catgctaatt gcaaaggggg 2101 tggttaggag ggtggttaag ggggcagggc taattgaatg catattaaat caaaaggagg 2161 aaggagaaac taaagtgtcg tagttaagtg gaaaagaaaa cgcgtttaaa tgttacctcg 2221 ttagtggaaa atgatgatgg aaaggatgaa ggccccagtc ccacaaaagg aaagtcaact 2281 ataaacaata ttgagattaa aaatggtgtt cggttcttta aaaggcttta gctactctga 2341 agtgaaaaca gaaaaacaaa aaaaaaaaca gtatgatacg gtaatggaca ttgatatgga 2401 tatttctaga tgtctaaaga ataagtcagg tttttttttg cgttcattca aaacttaatt 2461 cgttgggttt tctagaagaa atatacgcat acataaacgc atctgtatgt attaagtgtt 2521 taatggaaag agttctgtat atatatttaa ggcctgctca aagagaagga aaatttatgg 2581 ctaaagggga aaatgtttag acgatctttg caaactgtaa atatttataa ccttagtgat 2641 cccgaactat tgtagttttg ttgttatcat ggaaaaatgg ctctattttt tggcccctct 2701 gttgtcacct tcgttctcac ggctcaaaag actaatgcgg accctaggct taagccaatt 2761 ttggaaaccc ctaagacatt aatccgctaa aactgtgtgt gtgtgatttt tagctttaaa 2821 aattaaacac cgagttgaaa tataaaaaaa aaaatttaag gcatgccatt tatgttcctc 2881 atagaccctt cggtgtgctg agttcgaatc tggccataaa aatggaaaaa atccacctca 2941 aagttagaag cattatctac ataatttgat tatctgtggt agtttagaat tcagcaaa