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LOCUS XM_017153777 3025 bp mRNA linear INV 09-DEC-2024 (DIP-beta), transcript variant X2, mRNA. ACCESSION XM_017153777 VERSION XM_017153777.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153777.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3025 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3025 /gene="DIP-beta" /note="Dpr-interacting protein beta; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108065677" CDS 341..1993 /gene="DIP-beta" /codon_start=1 /product="neurotrimin isoform X2" /protein_id="XP_017009266.2" /db_xref="GeneID:108065677" /translation="MMNLLVVKESGERIADISCSQEHNRTETQPNPRRIANHRSRKLA QLEISSGSGGSGTGNGSGSGSGSGSGCGPAFRWQLLLLLLLCNCIDLTVSNKISSVGA FEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPVKVAWIKADAKAILAI HEHVITNNDRLSVQHNDYNTWTLNIRSVKMEDAGKYMCQVNTDPMKMQTATLEVVIPP DIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSV EGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTD VTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFG GYKCISKNSIGDTEGTIRLYEMERPGTQKKIRDDDLNEVSNEVVQKDTRSEDGSRNLN GRLYKDRAPDQHPASGGDPVLLVRGPRRLIGIFLLALLVLLTAMAEAGPTTLFCRTKG GRQKNAGATSLNGRRQDMKDKKWSKFWERSARSWSSGAKAAE" misc_feature 653..988 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 704..718 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409366" misc_feature 776..790 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409366" misc_feature 881..895 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409366" misc_feature 923..940 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409366" misc_feature 965..976 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409366" misc_feature 992..1282 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1049..1063 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 1088..1102 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 1175..1189 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 1217..1234 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 1259..1270 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 1340..1576 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 1343..1357 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:143207" misc_feature 1382..1399 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:143207" misc_feature 1454..1489 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:143207" misc_feature 1517..1534 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:143207" misc_feature 1556..1567 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:143207" ORIGIN 1 aaagaaaaag aagaaaagaa gagttttttt tgcccagtgt tggttgatta ttttccaagt 61 ttttttcgag tgttggccag tgctttggac ccgtttggtt tctcctcagg ttttttcgaa 121 aaaaaaaggt aattctgaaa actgaaactt aatcgtttgc cgctggaaat tcaatgtgag 181 ttgtggctgt gtcaatcccc ttctcaatca tcccgttacc cgtcgatcgc cgccttcaat 241 cattcaatca cacacgcttg ttcactcagt tgtcaattgc attatcgcat ctcaaagtaa 301 acaccgctaa aggcatacca atggaagcta ggacagtctt atgatgaact tgctggtggt 361 caaggaaagc ggcgagcgga tcgccgacat cagctgtagc caagagcata atagaaccga 421 aactcagcca aatcccagac gaatagccaa tcatcgcagt cgcaagctgg cgcaacttga 481 gatttcatcg ggatcgggag gatctggaac cggaaatgga agtggaagtg gaagtggaag 541 cgggagcgga tgtggacctg cctttcggtg gcaattgctt ctactcctac tgctctgcaa 601 ttgcattgat cttaccgttt cgaacaaaat ctcctcagtg ggcgccttcg agccggactt 661 tgtgattccg ctggagaacg tgaccatcgc ccaaggtcgg gacgcgacct ttacgtgcgt 721 tgtgaacaac cttgggggtc atcgggtgag tggtgacggt tcgtcagccc cagtcaaggt 781 cgcctggatt aaggccgatg ccaaggcaat tctggccatt cacgagcacg tgataaccaa 841 caatgatcga ttatcggtgc agcacaacga ctacaacaca tggacgctca acatacgcag 901 cgtcaaaatg gaggatgccg gcaaatacat gtgtcaggtc aacacggatc ccatgaagat 961 gcagaccgcc accttagagg tggtcattcc gccggacatc atcaacgaag agacctctgg 1021 agatatgatg gttcccgagg gcggatccgc caagctcgtc tgccgagcac gcggtcatcc 1081 caaacccaag atcacgtggc gacgcgagga cggcagggag atcattgccc gcaatggctc 1141 gcaccagaaa acaaaagccc aatcggtgga gggtgaaatg ctgacgctgt cgaagatcac 1201 gcgatcggaa atgggcgcct acatgtgcat cgcctccaac ggagtgccgc cgacggtgag 1261 caagcggatg aagctacagg tgcactttca tccactggtg caagtgccaa atcaattggt 1321 tggcgccccc gtcctcacgg atgtcacatt aatttgcaat gtcgaggcat cgccgaaggc 1381 catcaattat tggcagcgcg agaatggtga aatgattatt gccggcgatc gttatgcgct 1441 caccgaaaag gagaataata tgtacgccat cgagatgatt ctgcacatca aacgactgca 1501 atcgagcgat ttcggcggct acaagtgcat ctccaaaaat agcatcggcg acaccgaggg 1561 caccatccgg ctttatgaaa tggagcgacc cggcactcag aaaaaaattc gtgatgatga 1621 tctcaacgaa gtgtcgaacg aggtggtgca aaaggacacg cgcagcgagg acgggtcacg 1681 caacctgaac ggaaggctct acaaggaccg ggctccggat cagcacccgg ccagcggggg 1741 cgaccccgtg ctcctcgtcc gaggaccaag gcggctaatc ggtatatttc tattagcctt 1801 attggtttta ttaacggcaa tggcggaggc cgggccaacc acattgttct gccgcacaaa 1861 gggcggcaga caaaagaatg ccggggcaac gagtttgaat gggcggcggc aggatatgaa 1921 ggataagaag tggagcaagt tctgggaaag atcagcgcgg agttggagca gcggggcgaa 1981 ggcggcagag taagattatt atagcttaat tcaattgtaa ttatacaaac aagattatga 2041 tgcaaggagc tcctgcccca catccacaca aaagagggca ttaatcaccc ccctaatcat 2101 ctacgcccat gctaattgca aagggggtgg ttaggagggt ggttaagggg gcagggctaa 2161 ttgaatgcat attaaatcaa aaggaggaag gagaaactaa agtgtcgtag ttaagtggaa 2221 aagaaaacgc gtttaaatgt tacctcgtta gtggaaaatg atgatggaaa ggatgaaggc 2281 cccagtccca caaaaggaaa gtcaactata aacaatattg agattaaaaa tggtgttcgg 2341 ttctttaaaa ggctttagct actctgaagt gaaaacagaa aaacaaaaaa aaaaacagta 2401 tgatacggta atggacattg atatggatat ttctagatgt ctaaagaata agtcaggttt 2461 ttttttgcgt tcattcaaaa cttaattcgt tgggttttct agaagaaata tacgcataca 2521 taaacgcatc tgtatgtatt aagtgtttaa tggaaagagt tctgtatata tatttaaggc 2581 ctgctcaaag agaaggaaaa tttatggcta aaggggaaaa tgtttagacg atctttgcaa 2641 actgtaaata tttataacct tagtgatccc gaactattgt agttttgttg ttatcatgga 2701 aaaatggctc tattttttgg cccctctgtt gtcaccttcg ttctcacggc tcaaaagact 2761 aatgcggacc ctaggcttaa gccaattttg gaaaccccta agacattaat ccgctaaaac 2821 tgtgtgtgtg tgatttttag ctttaaaaat taaacaccga gttgaaatat aaaaaaaaaa 2881 atttaaggca tgccatttat gttcctcata gacccttcgg tgtgctgagt tcgaatctgg 2941 ccataaaaat ggaaaaaatc cacctcaaag ttagaagcat tatctacata atttgattat 3001 ctgtggtagt ttagaattca gcaaa