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LOCUS XM_017153776 3028 bp mRNA linear INV 09-DEC-2024 (DIP-beta), transcript variant X1, mRNA. ACCESSION XM_017153776 VERSION XM_017153776.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153776.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3028 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3028 /gene="DIP-beta" /note="Dpr-interacting protein beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065677" CDS 341..1996 /gene="DIP-beta" /codon_start=1 /product="neurotrimin isoform X1" /protein_id="XP_017009265.2" /db_xref="GeneID:108065677" /translation="MMNLLVVKESGERIADISCSQEHNRTETQPNPRRIANHRSRKLA QLEISSGSGGSGTGNGSGSGSGSGSGCGPAFRWQLLLLLLLCNCIDLTVSNKISSVGA FEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPVKVAWIKADAKAILAI HEHVITNNDRLSVQHNDYNTWTLNIRSVKMEDAGKYMCQVNTDPMKMQTATLEVVIPP DIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSV EGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTD VTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFG GYKCISKNSIGDTEGTIRLYEMERPGTQKKIRDDDLNEVSKNEVVQKDTRSEDGSRNL NGRLYKDRAPDQHPASGGDPVLLVRGPRRLIGIFLLALLVLLTAMAEAGPTTLFCRTK GGRQKNAGATSLNGRRQDMKDKKWSKFWERSARSWSSGAKAAE" misc_feature 653..988 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 704..718 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409366" misc_feature 776..790 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409366" misc_feature 881..895 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409366" misc_feature 923..940 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409366" misc_feature 965..976 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409366" misc_feature 992..1282 /gene="DIP-beta" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1049..1063 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 1088..1102 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 1175..1189 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 1217..1234 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 1259..1270 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 1340..1576 /gene="DIP-beta" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 1343..1357 /gene="DIP-beta" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:143207" misc_feature 1382..1399 /gene="DIP-beta" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:143207" misc_feature 1454..1489 /gene="DIP-beta" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:143207" misc_feature 1517..1534 /gene="DIP-beta" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:143207" misc_feature 1556..1567 /gene="DIP-beta" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:143207" ORIGIN 1 aaagaaaaag aagaaaagaa gagttttttt tgcccagtgt tggttgatta ttttccaagt 61 ttttttcgag tgttggccag tgctttggac ccgtttggtt tctcctcagg ttttttcgaa 121 aaaaaaaggt aattctgaaa actgaaactt aatcgtttgc cgctggaaat tcaatgtgag 181 ttgtggctgt gtcaatcccc ttctcaatca tcccgttacc cgtcgatcgc cgccttcaat 241 cattcaatca cacacgcttg ttcactcagt tgtcaattgc attatcgcat ctcaaagtaa 301 acaccgctaa aggcatacca atggaagcta ggacagtctt atgatgaact tgctggtggt 361 caaggaaagc ggcgagcgga tcgccgacat cagctgtagc caagagcata atagaaccga 421 aactcagcca aatcccagac gaatagccaa tcatcgcagt cgcaagctgg cgcaacttga 481 gatttcatcg ggatcgggag gatctggaac cggaaatgga agtggaagtg gaagtggaag 541 cgggagcgga tgtggacctg cctttcggtg gcaattgctt ctactcctac tgctctgcaa 601 ttgcattgat cttaccgttt cgaacaaaat ctcctcagtg ggcgccttcg agccggactt 661 tgtgattccg ctggagaacg tgaccatcgc ccaaggtcgg gacgcgacct ttacgtgcgt 721 tgtgaacaac cttgggggtc atcgggtgag tggtgacggt tcgtcagccc cagtcaaggt 781 cgcctggatt aaggccgatg ccaaggcaat tctggccatt cacgagcacg tgataaccaa 841 caatgatcga ttatcggtgc agcacaacga ctacaacaca tggacgctca acatacgcag 901 cgtcaaaatg gaggatgccg gcaaatacat gtgtcaggtc aacacggatc ccatgaagat 961 gcagaccgcc accttagagg tggtcattcc gccggacatc atcaacgaag agacctctgg 1021 agatatgatg gttcccgagg gcggatccgc caagctcgtc tgccgagcac gcggtcatcc 1081 caaacccaag atcacgtggc gacgcgagga cggcagggag atcattgccc gcaatggctc 1141 gcaccagaaa acaaaagccc aatcggtgga gggtgaaatg ctgacgctgt cgaagatcac 1201 gcgatcggaa atgggcgcct acatgtgcat cgcctccaac ggagtgccgc cgacggtgag 1261 caagcggatg aagctacagg tgcactttca tccactggtg caagtgccaa atcaattggt 1321 tggcgccccc gtcctcacgg atgtcacatt aatttgcaat gtcgaggcat cgccgaaggc 1381 catcaattat tggcagcgcg agaatggtga aatgattatt gccggcgatc gttatgcgct 1441 caccgaaaag gagaataata tgtacgccat cgagatgatt ctgcacatca aacgactgca 1501 atcgagcgat ttcggcggct acaagtgcat ctccaaaaat agcatcggcg acaccgaggg 1561 caccatccgg ctttatgaaa tggagcgacc cggcactcag aaaaaaattc gtgatgatga 1621 tctcaacgaa gtgtcgaaga acgaggtggt gcaaaaggac acgcgcagcg aggacgggtc 1681 acgcaacctg aacggaaggc tctacaagga ccgggctccg gatcagcacc cggccagcgg 1741 gggcgacccc gtgctcctcg tccgaggacc aaggcggcta atcggtatat ttctattagc 1801 cttattggtt ttattaacgg caatggcgga ggccgggcca accacattgt tctgccgcac 1861 aaagggcggc agacaaaaga atgccggggc aacgagtttg aatgggcggc ggcaggatat 1921 gaaggataag aagtggagca agttctggga aagatcagcg cggagttgga gcagcggggc 1981 gaaggcggca gagtaagatt attatagctt aattcaattg taattataca aacaagatta 2041 tgatgcaagg agctcctgcc ccacatccac acaaaagagg gcattaatca cccccctaat 2101 catctacgcc catgctaatt gcaaaggggg tggttaggag ggtggttaag ggggcagggc 2161 taattgaatg catattaaat caaaaggagg aaggagaaac taaagtgtcg tagttaagtg 2221 gaaaagaaaa cgcgtttaaa tgttacctcg ttagtggaaa atgatgatgg aaaggatgaa 2281 ggccccagtc ccacaaaagg aaagtcaact ataaacaata ttgagattaa aaatggtgtt 2341 cggttcttta aaaggcttta gctactctga agtgaaaaca gaaaaacaaa aaaaaaaaca 2401 gtatgatacg gtaatggaca ttgatatgga tatttctaga tgtctaaaga ataagtcagg 2461 tttttttttg cgttcattca aaacttaatt cgttgggttt tctagaagaa atatacgcat 2521 acataaacgc atctgtatgt attaagtgtt taatggaaag agttctgtat atatatttaa 2581 ggcctgctca aagagaagga aaatttatgg ctaaagggga aaatgtttag acgatctttg 2641 caaactgtaa atatttataa ccttagtgat cccgaactat tgtagttttg ttgttatcat 2701 ggaaaaatgg ctctattttt tggcccctct gttgtcacct tcgttctcac ggctcaaaag 2761 actaatgcgg accctaggct taagccaatt ttggaaaccc ctaagacatt aatccgctaa 2821 aactgtgtgt gtgtgatttt tagctttaaa aattaaacac cgagttgaaa tataaaaaaa 2881 aaaatttaag gcatgccatt tatgttcctc atagaccctt cggtgtgctg agttcgaatc 2941 tggccataaa aatggaaaaa atccacctca aagttagaag cattatctac ataatttgat 3001 tatctgtggt agtttagaat tcagcaaa