PREDICTED: Drosophila takahashii UTP3 small subunit processome

LOCUS       XM_017153766            1447 bp    mRNA    linear   INV 09-DEC-2024
            component Sas10 (Sas10), mRNA.
ACCESSION   XM_017153766
VERSION     XM_017153766.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153766.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1447
                     /gene="Sas10"
                     /note="UTP3 small subunit processome component Sas10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:108065674"
     CDS             110..1396
                     /gene="Sas10"
                     /codon_start=1
                     /product="something about silencing protein 10"
                     /protein_id="XP_017009255.2"
                     /db_xref="GeneID:108065674"
                     /translation="MDSEGDDYELTGSEQEYDAEEREILEDLRKQRKKRQQQDPVQEV
                     LAFSDDEDEEDDDQEKDDDVADLMRDSDIEGAEDDDRDLPNTMDWGSKRSTYYNTDFV
                     DQDYSSYNAQEEEEARAEEEEAKKIQLRLAKRLSEADFQLDDVEAAAEGSDDEKDKDK
                     EAVTKVTTDLTGLTARERRQLLQKDSPEFIGLTQDFQKHLNEVKDLITPVLNYVRNHN
                     VPLVPALKYASLYHTTLTTYCSNVAFYLLLKARRSSVKFHPVVKRLVQLKQLVEQLAP
                     RYEEYIRPQLEALLERIQDGDAFTVLDVAQRKAKLQILNKYGNGEEAEESEDDEEEEA
                     EKDEKELDGEEEEDQEDPELARRGITYQMAKNKGLTPHRKKELRNPRVKHRGKYRKAL
                     IRRKGAVRTVRKELQRYGGEMSGIKASVTKSVKFRV"
     misc_feature    689..928
                     /gene="Sas10"
                     /note="Sas10/Utp3/C1D family; Region: Sas10_Utp3;
                     pfam04000"
                     /db_xref="CDD:461123"
     misc_feature    1175..1387
                     /gene="Sas10"
                     /note="Sas10 C-terminal domain; Region: Sas10; pfam09368"
                     /db_xref="CDD:462775"
     polyA_site      1447
                     /gene="Sas10"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgatataaat aagttcgtct atcggctgcg tttgtttacg cacgtgttgc cgtttttttt
       61 tagttttatt taattattta agaaaaaagg catatattcc ggccagaaaa tggacagcga
      121 gggcgacgac tacgagctga ccggctccga gcaggagtac gatgcggagg agcgcgagat
      181 tctggaggat ctgcgcaagc agcgcaagaa gcgccagcag caggatcccg tccaggaagt
      241 cctggccttc agcgatgatg aggatgagga ggatgacgac caggagaagg acgacgatgt
      301 ggcggatctg atgcgggaca gcgacatcga gggagccgag gacgacgacc gggatctgcc
      361 caacacaatg gactggggca gcaagcggag cacctactac aacacggact tcgtggacca
      421 ggactacagc agctacaatg cccaggagga ggaggaggcg cgcgccgagg aggaggaggc
      481 caagaagatc cagttgcggc tggccaagcg gctcagcgag gcggatttcc agctggacga
      541 tgtcgaggcg gcggcagaag gcagcgatga tgaaaaggat aaggataagg aggcggtgac
      601 caaggtgacc accgatctga ccggtctgac ggcccgtgag cgccgtcagc tgctgcaaaa
      661 ggactccccc gagttcattg gcctcaccca ggactttcag aagcatctaa acgaggtcaa
      721 ggatcttata actcccgttc tcaactatgt aaggaaccac aacgttcccc tggtgccggc
      781 cctcaagtac gccagcctct atcacaccac cctgaccacc tactgctcca acgtggcctt
      841 ctatctgctg ctgaaggcgc gccggagcag cgtcaagttc catccggtgg tcaagcggct
      901 ggtgcagctc aagcagctgg tggagcagct agcgccgcgc tacgaggagt acatacggcc
      961 gcagctggag gcgctgctgg agcggataca ggacggcgat gccttcactg tgctggatgt
     1021 ggcgcagcgc aaggccaagc tgcagatctt gaacaagtac ggaaatgggg aggaggcgga
     1081 agagagcgag gatgatgagg aggaggaggc ggagaaggat gaaaaggagc tagatggcga
     1141 ggaggaggag gatcaagagg acccagagct cgcgcgacgc ggcatcacct accagatggc
     1201 caagaacaag ggcctcacgc cgcaccgcaa gaaggagctg cgcaatccgc gcgtcaagca
     1261 ccgcggcaaa taccgcaagg cgctcatccg gcgcaaggga gccgtgcgca cggtgcgcaa
     1321 ggagctgcag cgctacggcg gcgagatgtc cggcatcaag gcctccgtca ccaagagcgt
     1381 caagttccgc gtttaaaatc taaatctaaa tctaaataaa tcaaatcaaa taattttttc
     1441 tttttaa