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PREDICTED: Drosophila takahashii TOX high mobility group box family


LOCUS       XM_017153763            2309 bp    mRNA    linear   INV 09-DEC-2024
            member 3 (LOC108065671), mRNA.
ACCESSION   XM_017153763
VERSION     XM_017153763.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153763.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2309
                     /gene="LOC108065671"
                     /note="TOX high mobility group box family member 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:108065671"
     CDS             171..1151
                     /gene="LOC108065671"
                     /codon_start=1
                     /product="TOX high mobility group box family member 3"
                     /protein_id="XP_017009252.3"
                     /db_xref="GeneID:108065671"
                     /translation="MRPSAARTRVRVARLGFEFGLGEALAWQLSSRAHGTHAEQPEEI
                     DSPKPDPGPHPPREPLLIHPQPPHLISAALIGARTHMVEEIGCQRQTGIVVAMPSQVA
                     SSTGTPAPTAAGIHQQQQQQQHQQQHQQQQHHQQQQHQQLQQQQQQHHQQQQHLQQQQ
                     QHQQLTSNMSLLTVKGGRYLWTDRELLMHLQNYTPLILLIDFVEKTRTKRFYESSERY
                     EILMLVFIMRKGAPFCENKRFPAEYWVNLSVGPIAEAFDRLQAAIDIPDPQLPIHMSV
                     TDLTSWKQMFDLAMLDIRRFAYYTDPLQLADAGVFNRITFEQRFGMQWQE"
ORIGIN      
        1 gggatgtaga tatattttgt agttagcagc tcgcttggta acaaatctgc gaattgcagc
       61 cagcgcagta cgcgtccaat aagttcattg ccaaacgggc cgagtcccta aatgcacaca
      121 tccacattta catccacatt tccatcgggt ggcccaaccg agtccgaaaa atgaggccga
      181 gtgcagcgag aacgcgggtc cgagtggctc ggctcggctt cgagtttgga cttggggagg
      241 cactcgcgtg gcaactatcg tccagggcgc acggcacaca cgcagagcag ccggaggaga
      301 tagatagtcc taaacccgat ccaggtccac acccgccaag agaaccgctg ctgatccatc
      361 ctcaaccgcc tcatctaatt tccgccgctt tgattggggc acgcacgcac atggtggagg
      421 agattggctg ccagagacag acgggcattg tggtcgccat gcccagccag gtggcatcga
      481 gcaccggaac tccagctcca acagccgccg gcattcacca acagcagcaa cagcaacagc
      541 atcagcagca acatcagcag cagcaacatc atcagcagca gcaacatcag caactccagc
      601 agcagcaaca gcaacaccat cagcagcagc aacaccttca gcagcaacag caacatcaac
      661 aactcaccag caacatgagc ctgctgaccg tcaagggcgg tcgctacctt tggaccgatc
      721 gggagctatt aatgcacctc cagaactaca ctcccttgat cctgctcatc gatttcgtgg
      781 agaagaccag gaccaagcga ttctacgaga gcagcgagcg ctacgagatc ctcatgctgg
      841 tcttcatcat gcgcaaggga gcgccgttct gcgagaacaa gcgatttccg gcggagtact
      901 gggtaaatct gtcggtgggt ccaattgccg aggcttttga ccgactgcag gcggccatcg
      961 acataccgga tccccagctg cccattcaca tgagcgtcac ggatttgacc agctggaagc
     1021 agatgttcga cctggccatg ctggacatca ggcgattcgc ctactacacc gatcccttgc
     1081 agctggccga tgcgggcgtc ttcaatcgga tcacctttga gcagcgattc ggaatgcagt
     1141 ggcaggagta gaagttggaa tcgatacagg tcacaggata taaacacaac cccagcacca
     1201 aaacacttca acacattggg atggatcgag gggaattcga acaaaagctg gttgtaaata
     1261 aagggaacta tctttagatt atcgcagatt taatagtatt gctaacaggc ctgattttgc
     1321 attttattta ttaacaaaca cgtccaggta tattttttgt agtaaaaagt aataagtttc
     1381 tggaaattcg aattttaaat atgtttttct ttttacaaat attacaaact gagtgaaaaa
     1441 atttaaattt aaagttcaat cattatatta caagaaatgc caggaccaag catttaatta
     1501 aatatctaat atcagctaaa atctttagat tatggcagat ttaattgtgg tgccaacagg
     1561 cctgatattt gcattttttt tttaaagaaa tacgtccagg taaaatattt tttgtagtaa
     1621 aaactaatag tttctagaaa ttcaaatttt aaaatatgtt attcttttta caaatattgc
     1681 aaagtgagtg aaaaaattag aattttaaag ttcaatcatt attttacaag aaatgtcaga
     1741 accaagcatt taattaaata tttaatatca gctaaaatct ttagattatg gcagatttaa
     1801 ttgtagagct aacaggcctg atatttgcat tttatttatt aacaaatacg tccaggtaaa
     1861 atattttttg tagtaaatct ctaaaaaagt aataagtttc tagaaattcg aattcaaaat
     1921 atgttattct ttttacaaat attacaaaga gagtgaacaa atttaaattt aaagttcaat
     1981 cattatatta caagaaacgc caggacaagc atttaattaa atatttaata tcagctaaaa
     2041 atagttcccg aaaaaaagat taatttgata ctaccgaaac ttaaccgatc catccaatcc
     2101 cacatagaca gagttatttg ttgcgttcga atccctgcat agcggaatct actgtgcctt
     2161 ctccaccact ccagatcctc ctcctcctcc acagttccac tcgcattcct cgcaactcct
     2221 ccaacttcat ctcttctcag actcctcaaa atgtatctgt aatacaatgt actgtcgacg
     2281 taggacccaa aatgctttaa tggaaataa