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PREDICTED: Drosophila takahashii eye pigment precursor family


LOCUS       XM_017153752            2354 bp    mRNA    linear   INV 09-DEC-2024
            transporter white (w), mRNA.
ACCESSION   XM_017153752
VERSION     XM_017153752.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153752.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2354
                     /gene="w"
                     /note="eye pigment precursor family transporter white;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 15 Proteins"
                     /db_xref="GeneID:108065664"
     CDS             153..2216
                     /gene="w"
                     /codon_start=1
                     /product="protein white"
                     /protein_id="XP_017009241.2"
                     /db_xref="GeneID:108065664"
                     /translation="MGQEDQELLIRGGSKHPSAEHLNNGDSGGASQSCISQGFGQAKN
                     YGTLRPPSPPEDSNSGTGQLAENLTYAWHNLDIFGAVNQPGSGWRQLVNRTRGLFCNE
                     RHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRL
                     LNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQV
                     IQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTA
                     HSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSY
                     VGAQCPTNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNL
                     DKPLEQPENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFL
                     GQQLTQVGVMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFL
                     GKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCA
                     SSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWAD
                     VEPGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVFAYLALRLR
                     ARRKE"
     misc_feature    354..2213
                     /gene="w"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; Region: 3a01204; TIGR00955"
                     /db_xref="CDD:273361"
     polyA_site      2354
                     /gene="w"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtttcgtgac gaagctccaa gcggtttact ccatcaatta aacacgaatt gcagtgccaa
       61 aacgtcgctc ggtgttctga tttacttatt tttgtttgag tgattgtttt tgggtgggaa
      121 agcgccgggg aaagtcagcg aaaatccctg cgatgggcca agaggatcag gagctactaa
      181 ttcgcggcgg cagcaagcac ccatccgccg aacatctgaa caatggtgac agcggagggg
      241 cttcgcagag ctgcattagc cagggcttcg ggcaggccaa gaactacggc acccttcgtc
      301 cgcccagtcc gccggaggac tcgaactcgg gcactggcca gctggccgag aacctaacct
      361 acgcctggca caacctggac attttcgggg cggtcaatca gccgggatcc ggatggcggc
      421 agctggtcaa ccggacacgc ggactcttct gcaacgagcg acacatcccg gcgcccagga
      481 agcatctcct gaagaacgtt tgcggcgtgg cctatccggg tgagttgctg gccgtgatgg
      541 gaagttcggg ggccgggaag acgaccctgc tgaatgcgct ggccttccgg tcgccgcagg
      601 gcatccaggt gtcgccgtcg gggatgcgac tgctgaacgg acagccggtg gacgccaagg
      661 agatgcaggc caggtgcgcc tatgtccagc aggatgacct cttcatcggc tcgctgacgg
      721 ccagggagca cctgattttc caggcgatgg tgcggatgcc acgacacctc acctaccgcc
      781 agcgggtggc ccgcgtggac caggtgatcc aggagctgtc gctcagcaag tgccagcaca
      841 cgattatcgg agtgcctggc cgggtgaagg gtctctcggg gggcgagagg aagcggctgg
      901 ccttcgcctc ggaggccctc accgatccgc cgctgctcat ctgcgatgaa cccacctccg
      961 gcctggactc cttcaccgcc cacagcgtcg tccaggtgct gaagaagcta tcgcagaagg
     1021 gcaagaccgt catcctgacc atccaccagc cgtcctccga actcttcgag ctcttcgaca
     1081 agatccttct gatggccgag ggcagggtcg ccttcctggg cactcccagc gaggccgtcg
     1141 acttcttctc ctacgtggga gcccagtgtc ccacgaacta caatccggcg gacttttacg
     1201 ttcaggtgtt ggccgtggtt cccggacgag agattgaatc tcgggatcgc atcgccaaga
     1261 tctgcgacaa tttcgccatt agcaaagtgg cccgggatat ggaacagctg ctggccacca
     1321 agaatctgga taagccactg gaacagccgg agaatgggta cacctacaag gccacctggt
     1381 tcatgcagtt ccgggcagtc ctgtggcgat cctggctgtc ggtgctcaag gaaccactcc
     1441 tggtcaaagt gcgactcatt cagacaacga tggttgccat cttgattggc ctcatctttt
     1501 tgggccaaca actaacgcaa gtgggtgtga tgaatatcaa cggagccatc ttcctcttcc
     1561 tgaccaacat gaccttccaa aatgtctttg ccacgattaa tgtgttcacc tccgaactgc
     1621 cagttttcat gagggaggcg cgcagtcgac tctatcgatg cgacacgtac tttctgggca
     1681 agacgattgc cgaactgccg ctttttctca cggtgccgct ggtcttcacg gcgattgcct
     1741 atccgatgat tggcctgcgg gccggagtgc tgcacttctt caactgcctg gcactggtca
     1801 cactggtggc caacgtgtcc acctccttcg gctacctgat atcctgcgcc agctcctcga
     1861 cctcgatggc tttgtcggtg ggtccgccgg tcatcatacc cttcctgctg ttcggcggct
     1921 tcttcctgaa ctcgggatcg gtgccggttt acctcaagtg gctgtcgtat ctctcctggt
     1981 tccggtacgc caacgagggc ctgctgatca accagtgggc ggacgtggag ccgggcgaga
     2041 tcagctgcac ctcgtcgaac accacgtgcc ccagttccgg caaggtcatc ctggagaccc
     2101 tcaacttctc cgccgccgat ttgccgctgg actacgtggg tctggccatc ctcatcgtta
     2161 gcttccgggt gttcgcctat ctggcccttc gacttcgggc caggcgcaag gagtagatcc
     2221 ccaagcattc atatcccata gttaattcat attttttttt accataatta ccatcgtgtt
     2281 tattgtttat tgccccccac aaaagccatt gtaattcaat ttgtgtcaat aaaaacaaga
     2341 tatgacttat atta