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LOCUS XM_017153728 8501 bp mRNA linear INV 09-DEC-2024 nucleotide-exchange protein 3 (LOC108065651), mRNA. ACCESSION XM_017153728 VERSION XM_017153728.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153728.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8501 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8501 /gene="LOC108065651" /note="brefeldin A-inhibited guanine nucleotide-exchange protein 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065651" CDS 465..6626 /gene="LOC108065651" /codon_start=1 /product="brefeldin A-inhibited guanine nucleotide-exchange protein 3" /protein_id="XP_017009217.2" /db_xref="GeneID:108065651" /translation="MEDLFLLIIKESTGTKHNALRQTAQIAYDKLYRQHGIHRDPSHE LRSVCFTALQMALDTKRPKFITMGLNGLHRVIKDERFYIGLEPEDDSVWLPSQLLRAT NGILPSTSSEDTVVNVLRLFLAMACSPACTLNGRLLIEILSRCGECWEMGSRATKAAS LAAASQCLRTFCAFLIEEAEEVKKTAPAGLMTQTQASAVYNEVIPVMQWLCSRLVEPN VNASPNKKCENHSSLYLTECILTLSSALPRNVHANPHFTSFLWQKFCPTLAAALGSPG RINLDKKFTYKDALHMIENEARGFFTGPGLDGPQARCVYLTAIQLLRIAGAHGSLRPM LEALFHRMLLLPAPQNRTEPLRCVREIFKSPERLIDLAVILYVDKNTAQGCSDEMALF RLLVDAMEECAYGASGVGSATEASLQASVECMVALLDSLQVLCSGELTESMISDQIVQ VVNGRHDLLKDADYSGPLTYQSMARLPAPYRDAIVEFRQNVFETSSGSESEGEPPHEQ DAASNGSGDTEGPEDDDPSSSSDETSRVENRWPYSHLEAPVMPIRTDSDNDRQHARDF ARALRQDLVPKLLRLRSCVELDEAMQEFASAVCQENSMNFSDFDYNLTAINADGIYLA IYSSLLLSLQLMRSGYYEQVAQGIAHKDILVPMSEQQFVTSVQNTGVLVYLSSPWLCE LYQSVTVCNVLEAMPRQQLEGMGPRCALVDMLCDAGGLGATQMLSEWQRLQTANVKHK EEEQLHDKRREAAKKLCRRLLTCCWDSMVIVLSSGLGDLQTSSASNKLVALSKRTLRV KAKANKSNGEALYAMCLDGLHSAATLSNSLNLQHLAGKILNLLASNVCQTSGPRISAS QAMSMDVVLTGGLNLGSYSADCWPSIFAVCRHVSQLEHEIFSMQNPAISASPGSSRRD LETGEKLSNGNAQDKLNLSSIPIDDDETCVDVYSFLQAPMQSPNTNITSILKVYSGTN ETVLLSQSDTSKVLCALSHQAENLFGDAAERLSLPSLCQFLKHLCRASREQLYKSQVA RKGSRIWWPSKGWKKLDSLPMSLLLHRIGDVTLKVFRSSRPLLHVLKVWAITGPHLMD AACHRDRMISKRAIEYIHDIITALLVEQSELPYFHFNEALLKPFENLLSMDTDVDVQD QIVACLYEVVEAHRTEIRSGWRPLFGTLRNARSRMLNMSNIIDIFRVFLDSDNTLVFA NAGLDCILCLLSYLEISGGGNNNSCSGSAAAGSGNGGQQQQQQQQQEEDNTFRPTDFL HETLRFLERCSSILGFMHSMPKCPNFHSTYKIKGISYTHIIDANIPSSMENFTYFGND YLQTRNEQYMISYRSLHIDKDTIVKIDEMDKPSGVLKVWFLLLDGLTNSLIVCPYSHQ APILQTIFKLFKNLLLSPGIDFGFYCINHLLVPMIQDWLRYINKTGSSWQLVEKNFKH CCCMTTDLVVEFIEKSVPEQRRLGAGTKTRLAQIVHPADNLLYSKLKFVTERIEREQQ QSVQDQGCGYGQQYDSSSSSASEEQQKNSSGGGGGAPNLIESPTKISGSATLALKQLL LVLIECAAQSQEAIARISVSCLKHVILSTGMLFNESQWMIACSAIHRACTVTIAPLRQ LSFAFHEKSNSFYGDCANVKVAARRDSSLEELARIYALAQQVFLSDNQREPGQNQAPT PSASQCKLSDDRSYSFLLYPLNNGFNSNLDNFVIRIPFKNLVVGLLANQMLLQLVAKL LLSRLKCVPQAVSTCIFDNYAASAASPSHDYDLDFRSKEILLRCVKQYLMSALEFDSR PGLKFLMQKVSNIEYAANLYKQMTSSWMIYYIALVDSHLNDIVVYNLGPEDLNFILES CSRLNTTTVKKKENFVRYLFCLQDAWNLVCELYLSNSALHEIESGSGKLRQKPPPQLQ QHHHPQSKPMCISLNGNGDAEMTDTGSGSGSGSSTSPSKCVQLQEEENVTMTTLISEF QPKCRSNPFDTNRQAKSSEAESISPEIEQQRASSILKDSNYKRAALAQLVVASMELLR SLPGEAEENLKLLMTPTIREAFRLVQLQGNELKVNQF" misc_feature 1815..2540 /gene="LOC108065651" /note="Sec7 domain; Region: Sec7; smart00222" /db_xref="CDD:214569" misc_feature 3807..>3995 /gene="LOC108065651" /note="Domain of unknown function (DUF1981); Region: DUF1981; pfam09324" /db_xref="CDD:462756" ORIGIN 1 cgataaacgg tacaatcgaa cagctgactt gcagacatgc gcaatcctgc gcacttaacg 61 gtactccatg cgcactccgc cgtaaatgga gaaagtgctt tcctttcgcg tcacacagca 121 tttgtcgcat ccaacggcaa gtgcagcgca atttgccacg gaaaaagcag aaggaaagtg 181 tcgtggaaac tgtgtgtgga aaacagcagg aaaaaccaca agtggtggct gctaacggtt 241 gccaagcatt atgaacatat tcgactgtga aaatggcgct aattgagttg ttgttgttat 301 taccaataat ggcgtgcaag ggcgaagcaa caacaacagc agcagcagca aacaaaattg 361 cctgaagcag caacaacaaa acacgcacac caggaaagaa atatttggcc aacacacaca 421 cacacgcaaa caaggagaga gtgttagaaa gagagagcgg caatatggag gacctctttt 481 tacttattat caaggaatca acgggaacta aacacaatgc gctgcggcaa acggcgcaaa 541 tcgcttacga taaactctat cgccagcatg gaattcaccg ggatccgtcg cacgagctgc 601 gctccgtttg ctttaccgcc ctgcagatgg cgctggacac aaagcggccc aagttcatca 661 cgatgggact caacggcctc catcgcgtca tcaaggacga acgcttctac atcggcctcg 721 agcccgagga cgactccgtg tggctcccgt cacagctgct gagggccacc aacggcatcc 781 tgccgtcgac gagcagcgag gacacggtgg tcaatgtgct gcgcctcttc ctggcgatgg 841 cctgctcccc cgcctgcacc ctgaacggcc gcctgctcat cgagatcctg tcccggtgcg 901 gcgagtgctg ggagatgggc tcgcgggcca ccaaggccgc ctccttggcc gccgcctccc 961 agtgcctgcg caccttctgc gccttcctca tcgaggaggc cgaggaggtg aagaagacgg 1021 cgcccgccgg cctgatgacc cagacgcagg cctccgccgt ctacaacgag gtcatacccg 1081 tgatgcagtg gctctgcagc cggctggtgg agcccaatgt gaacgcctcg cccaacaaga 1141 agtgcgagaa ccacagctcg ctgtacctca ccgaatgcat cctcacgctg agctcggccc 1201 tgccccggaa cgtccatgcc aatccgcact tcacctcctt cctgtggcag aagttctgtc 1261 ccacgctggc ggcggccctg ggatcacccg gcaggatcaa tctggacaag aagtttactt 1321 acaaggacgc cctgcacatg atcgagaacg aggctcgtgg cttcttcacc ggtcccggat 1381 tagatggccc gcaggcccgt tgtgtctact tgaccgccat tcagttactt cggattgccg 1441 gcgcccatgg ctcactgcgt cccatgctgg aggccctgtt ccatcggatg ctcctgctgc 1501 cggctcccca aaaccggaca gagccccttc ggtgcgtgcg agagatcttc aagagcccgg 1561 agcgactgat cgacctggcg gtgatcttat atgtggacaa gaacaccgcc cagggatgca 1621 gcgatgagat ggcgttgttc cggctcctgg tggacgccat ggaggagtgc gcctatgggg 1681 ccagcggcgt gggctcggcc acggaggcca gtctgcaggc gagcgtggag tgcatggtgg 1741 ccctgctgga cagcctgcag gtgctctgca gcggcgagct gaccgagtcg atgatcagcg 1801 accagatcgt gcaggtggtc aacggacggc acgacctgct caaggatgcg gactactcgg 1861 gtccgctgac ctaccagagc atggcccgtc tgccggcgcc gtatcgcgat gccatcgtgg 1921 agttccggca gaacgtcttc gagacgtcgt cgggttcgga gagcgagggt gagccgccgc 1981 acgagcagga tgcggcctcc aatggttcgg gggacaccga gggacccgag gacgacgacc 2041 cgagcagcag cagtgatgag acatcgcgtg tggagaaccg ctggccctac tcgcatctcg 2101 aggcccccgt gatgcccata cgaacggata gcgacaatga tcgccagcat gccagggatt 2161 tcgcaagggc tttgcggcag gatctggtgc cgaaactgct gcggctgcgc agctgcgtgg 2221 agctggacga ggccatgcag gagttcgcct cggccgtttg ccaggagaac agcatgaact 2281 tctcggattt cgattacaac ctgaccgcca tcaatgcgga cggcatctac ctggccatct 2341 actcgtcgct gctgctcagc ctgcagctga tgcggtccgg ctactacgag caggtggccc 2401 agggcatcgc gcacaaggac atcctggtgc cgatgtcgga gcagcagttt gtgacgtcgg 2461 tgcagaacac aggtgtcctc gtctatctct cctcgccgtg gctctgcgaa ctctaccagt 2521 cggtgacggt gtgtaatgtt ttggaggcca tgccccgcca gcagctggag ggaatggggc 2581 cgcgctgcgc cctcgtcgat atgctgtgcg atgccggcgg actgggagcc acccagatgt 2641 tgtccgagtg gcagcgcctg cagacggcca atgtgaagca caaggaggag gagcagctgc 2701 acgacaagcg ccgggaggcg gccaagaagc tgtgccgccg cctgctcacc tgctgctggg 2761 actcgatggt cattgtgctg agctcgggcc tgggcgatct gcagaccagt tcggcatcca 2821 acaagctggt ggcgctctcg aaacgaacgc tgcgggtgaa ggccaaggcg aataagtcga 2881 acggggaggc gctgtatgcc atgtgcctgg acggtttgca ttcggccgcc accctcagca 2941 acagcttgaa tctgcagcat ttggctggga agatactcaa cctgctggcc tcgaatgtct 3001 gccagacctc cggaccgcgc atctcggcca gccaggccat gtccatggac gtggtgctca 3061 caggcggcct gaatttgggc agctacagtg ccgactgctg gccgagcatc ttcgccgttt 3121 gccggcatgt cagccagctg gagcacgaga tcttcagcat gcagaaccct gcgatttccg 3181 catcgccggg cagcagtcga cgggatttgg agacgggcga gaagctgagc aacggcaatg 3241 cccaggacaa gctcaacctg tcctccatac ccatcgatga tgatgagacg tgtgtggatg 3301 tgtacagctt cctgcaggca ccgatgcaga gtcccaacac gaacatcacc tccattctga 3361 aggtctactc gggcacgaat gagacggtgc tgctcagcca gagcgacacc tccaaggtgc 3421 tctgcgccct gtcgcaccag gcggagaacc tcttcggcga cgccgccgag cggctcagcc 3481 tgccctcgct gtgccagttc ctcaaacacc tgtgccgcgc ctccagggag cagctgtaca 3541 agagccaggt ggcccgcaag ggcagtcgca tctggtggcc cagcaagggc tggaagaagc 3601 tggactcgct gcccatgtcc ctgctcctcc atcggatcgg ggatgtcacg ctcaaggtgt 3661 tccgcagctc gcgcccgctg ctgcacgtgc tcaaggtctg ggccatcacg ggaccgcatc 3721 tgatggatgc cgcctgccac cgcgaccgga tgatctcgaa gcgggcgatc gagtacattc 3781 acgacatcat cacggccctg ctggtggagc agtctgagct gccgtacttc cacttcaacg 3841 aggcgctgct gaagcccttc gagaacctgc tgagcatgga cacggatgtg gatgtgcagg 3901 atcagatcgt ggcctgtctg tacgaggtgg tggaggcgca ccgcaccgaa atccgctctg 3961 ggtggcgacc ccttttcgga acgctgcgca atgcccgcag tcgcatgctg aacatgagca 4021 acatcatcga catattccgc gtgttcctcg actcggacaa cacgctggtg ttcgccaacg 4081 cgggactgga ctgcatcctg tgtttgctgt cctacctgga gatctcgggc ggtggcaaca 4141 acaattcctg ctcgggaagt gcagcggcgg gatctggaaa tggtggccag cagcaacagc 4201 agcagcagca acaggaggag gacaacacct tccggcccac ggacttcctg cacgagacgc 4261 tgcgcttcct cgagcgctgc tccagcatac tgggcttcat gcacagcatg cccaagtgcc 4321 ccaacttcca ctcgacctac aagatcaagg gcatctcgta cacgcacatc atcgacgcga 4381 atattcccag ttcgatggag aacttcacgt acttcggcaa cgactatctg cagacgcgga 4441 acgagcagta catgatctcc taccgatcgc tgcacatcga caaggacacc atcgtcaaaa 4501 tcgacgagat ggacaagccg tcgggggtgc tcaaggtgtg gttcctgctg ctcgacgggc 4561 tgaccaactc gctgatcgtc tgcccctatt cccaccaggc gcccatcctg cagacgatct 4621 tcaagctctt caagaacctg ctgctcagtc cgggcatcga tttcggtttc tactgcatca 4681 accatctgct ggtgccgatg atccaggact ggctgcgcta catcaacaag acgggctcct 4741 cctggcagct ggtggagaag aacttcaagc actgctgctg catgaccacc gatctggtgg 4801 tggagttcat cgagaagtcg gtgccggagc agcggcgcct gggtgcgggc accaagacgc 4861 ggctggcgca gattgttcat ccggcggaca acctgctgta ctccaagctc aagtttgtca 4921 cggagcggat cgaaagggag cagcagcagt cggtccaaga tcagggatgt ggctatggtc 4981 agcagtacga cagcagttcc agctccgcca gcgaggagca gcagaagaat agcagcggag 5041 gaggaggagg agcacccaac ctcatagaat cacccaccaa gatctccggc tcggccacgc 5101 tggctttgaa gcagttgctc ctggttctaa tcgaatgcgc tgcccagtcg caggaggcga 5161 tcgcccggat ctcggtgtcc tgcctcaagc acgtcatcct ctccaccggc atgctcttca 5221 acgagtccca gtggatgatc gcctgctcgg ccatccatcg cgcctgcacc gtgacgattg 5281 ccccgctgcg tcagctctcc ttcgccttcc acgagaagtc gaacagcttc tatggggatt 5341 gcgccaacgt caaggtggcc gcccggcggg acagcagcct ggaggagctg gccaggatct 5401 atgcgctggc ccagcaggtc tttctgtcgg acaatcagcg tgagccgggc cagaatcagg 5461 cgcccacgcc gagtgcctcg cagtgcaagt tgtccgacga caggagctac tcgtttctct 5521 tgtacccctt gaacaatggc ttcaactcga acctggacaa cttcgtgatc cggataccgt 5581 tcaagaattt ggtggtgggc ctgctggcca accagatgct gctccagctg gtggccaagc 5641 tgctgctgtc gcgtctgaag tgcgtgcccc aggcggtgtc cacctgcatc ttcgacaact 5701 acgccgcctc ggctgcgtcg cccagtcacg actacgacct ggactttcgc tccaaggaga 5761 tcctgctgcg ctgcgtcaaa cagtatctga tgtccgccct ggagttcgat tcgcgacccg 5821 gcctcaagtt cctcatgcag aaggtgtcga acattgagta cgcggcgaat ctgtacaagc 5881 agatgacctc ctcgtggatg atctactaca tagcgctggt ggactcgcat ctcaacgaca 5941 tagtggtcta caatctgggg ccggaggatc tcaatttcat actggagtcc tgctcccggc 6001 tgaacaccac cacggtgaag aagaaggaga actttgtgcg ctacctgttc tgcctgcagg 6061 atgcctggaa tctggtgtgt gagctctact tgagcaactc ggccctgcac gagatcgaga 6121 gtggatcggg taagctgcgc cagaagccgc cgccgcagct gcagcagcac caccatccgc 6181 agagcaagcc catgtgcatc tccctgaacg ggaatggaga tgccgagatg acggacacgg 6241 gttccggttc aggttcaggc agcagcacct cgcccagcaa gtgcgtccag ctgcaggagg 6301 aggagaacgt gaccatgacc acgctgatca gcgagttcca gcccaagtgc cgcagcaatc 6361 cgttcgacac gaaccggcag gccaagtcct cggaggcgga gtccatatcg ccggaaatcg 6421 aacagcagcg ggccagcagc atcctgaagg actccaacta caagagggcc gccctcgccc 6481 agctggtggt ggcctccatg gagctactgc gttcgcttcc cggcgaggcc gaggagaacc 6541 tcaagctcct gatgacgccc acgattcgcg aggccttccg tctcgtccag ctgcagggca 6601 acgagctgaa ggtcaaccag ttttaggcca tgcttgttga gttttatttt gatctgtagg 6661 cgcagcccct gcccctacca aaaaggatcc ttccaccccc ttccagaagt cctccaaaag 6721 taatccctgc cccgctcccg aatggctaat ttacagctac gtctgcatct catgctctct 6781 ctctgtctca ctctctatgt ctgtctctct ctctgtcagt ggagagctag ggcttcagtg 6841 cgaccaacaa tatatctcaa ttatatcaaa ggatataccc tagatatgtt aaatcgtagt 6901 aacttttcat aacttcataa aaaaactgta ctccatgaat ttagattgtt taaatcgcaa 6961 atcagtatta tcttctagat cgattttaag tgaaatattc ttatgtattc agataacaaa 7021 caacctctac ttagcttgta aaacagttag ttcttttagt ccttttgaac atcgataaga 7081 tttccctaaa ttaatgtaat gttttacgaa atgatttgca tgcctcacat gcaacgttgg 7141 tcacactagt cgcatgctct ccatcggtcc ctctctctct ctctcgcccg cagttcccag 7201 cacagcaggc aaaaccattt caaagtaaaa gctcaacatg ccagcacaaa aaagcaaaac 7261 tatcgaaagt acaacagtgt cgaagcattg caaggatatc ggctatataa gatatctcat 7321 tgcgattaga ggatgaagat gacgaagaag cgtagacaac gtagtcctgt acattaaatt 7381 tagtcaagac tttctcacac ttagcccctg caccgccccc gcgccccctt cttcctttta 7441 gcccgcctcc cgaccacgcc ccctctccca gcacttttcg acttctaata ttgtaaagat 7501 gtatcagcga gcagctgtcc cgccctaaaa atcagtaaat tatatatata tatatatata 7561 tatacattat attaagagtg taacctatgt aaacttatag cgaatgttaa ctaacacaaa 7621 atcagtgccg cccattaatc cacgattacc accattaaag attagatcac acaagcatac 7681 acatagagcc tatactaaaa acatatgtgt gtccaagtag tcccgcgctg cctttaaaaa 7741 tacttgcata cttttgtacc agtgtgcgta cctaagaaaa gaaatatcga aattatcgaa 7801 agcaacataa ccgaacaaat tctagccacc ttgctgcact atcaaatcaa agcttactag 7861 cctatatttt cacgcccaca cccacatacc acacaatatc ggggttgaga tcaggaaatt 7921 tgaagactag gctctaggtt ctcctgtctc tgtgacccat catcgatttg tcccgcgccc 7981 agctaatagc gatagcgata gcgataccga tacctacata tacaaacagc tacgtacagt 8041 tatatgccta tataaagatc taaagagtta tatattgata tacataaatg tacttatatg 8101 tattatagtt gccacttggg tataaatgtt gtaaatgtct aacaaaggaa acatttttat 8161 atgtgaaaac tattagcaac agcgctacaa atctatacat atactataaa tataaatata 8221 attatataca catatacatt tattttcgct ttgtcgtata cagtatatac atctacatac 8281 atatatataa tatatagaga actatgtact tgtgttattt acttgcccat ctcaactctc 8341 tcaatctatc tctttctaat gacttgtaag tgtaagtgcg aagagtgcag ttgcagaggc 8401 ccgcagaaag tgtagaagaa atgatcgcga tcgcgctagg ctagaactaa aactctccaa 8461 gagtgcattt gtaacatgaa tgaataaacg attccacaac g