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LOCUS XM_017153703 3126 bp mRNA linear INV 09-DEC-2024 thrombospondin type 1 motif B (AdamTS-B), transcript variant X2, mRNA. ACCESSION XM_017153703 VERSION XM_017153703.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153703.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3126 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3126 /gene="AdamTS-B" /note="ADAM metallopeptidase with thrombospondin type 1 motif B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065637" CDS 680..3016 /gene="AdamTS-B" /codon_start=1 /product="A disintegrin and metalloproteinase with thrombospondin motifs 7 isoform X2" /protein_id="XP_017009192.2" /db_xref="GeneID:108065637" /translation="MVIECNRMWIRSLLLCFWLVVGTQGGGGGGGGRQLFGLHSDELV AGEGQLVVPRRVHPDGAFMTHSLDFAHDRDHRRHRQRRSLNLEQEDVDNPAADLHLQL PLANETLHLELTAHSYFLAPNLVVERHRRDLRTRSPLNPRHLNCHFHGKVRGQQATNV AISTCSGLVGHIRTASNEYFIEPSKQHEPHPASGHPHVVFQRSSVKPKHASRKRNKRK RGGGSGSGLGSGSGAEVSNCGTREPRRRMETRLEWQSRGKVKVQGGRQIRRHHKHKSH HQKNHRVPHTKFKYETQFQTEQDQQQDHPHPHPEIPRRRRSISSPRHVETLIVADATM SAFHKDLNGYLLTIMNMVSALYKDPSIGNSIEIVVVRIIQLDEEESQLQLNLTQNAQK NLDRFCSWQHKLNKGSEKDPHHHDVAILITRKNICANNCMTLGLANVGGMCKPKQSCS VNEDNGIMLSHTITHELGHNFGMFHDTAKIGCHPRVGPIVHIMTPTFGADTLQVCWSN CSRKYITHFLDQGLGECLDDPPTPLDEYNYTGELPGMRYNARGQCRLQFNLTTDSEVG ACSTPHELCSTLWCRVNGECVTHMRPTAPGTLCGRNKWCQNGKCVRREELAAVNGGWG DWSEWSECSRSCGGGVSTQQRECDSPVPANGGVFCIGERKRYKICRKRPCPAEEPSFR AQQCARFDNVSYQGATYKWLPFFDKNNPCKLFCSDVDDTIIANWGSTVLDGTPCTLGT NNMCIDGICKLVAIGSSTRRCRTIAAVSAAVLAISASR" misc_feature 824..1279 /gene="AdamTS-B" /note="Reprolysin family propeptide; Region: Pep_M12B_propep; pfam01562" /db_xref="CDD:460254" misc_feature 1646..2260 /gene="AdamTS-B" /note="Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that...; Region: ZnMc_ADAMTS_like; cd04273" /db_xref="CDD:239801" misc_feature order(2072..2077,2084..2086,2102..2104) /gene="AdamTS-B" /note="active site" /db_xref="CDD:239801" misc_feature 2306..2512 /gene="AdamTS-B" /note="ADAMTS cysteine-rich domain 2; Region: ADAMTS_CR_2; pfam17771" /db_xref="CDD:465496" misc_feature 2546..2704 /gene="AdamTS-B" /note="Thrombospondin type 1 repeats; Region: TSP1; smart00209" /db_xref="CDD:214559" ORIGIN 1 ttcacccgcg ctgattgtgc tgcctcgctt cctatagaga gccattaaga aaaatcagag 61 gaaaacgtcg atatatccga tacgacgccg gaacaaactg agactcttgt gcgaagtgtg 121 gataatatga tattttgatt tagttccgaa ttccgagcag cgcttatctg aagaaatgcc 181 gatatatgta tacctaaacc tatgccagat ataggaatat aaatttaaag cctgtgcgca 241 tgcccatgtg tgagtgtgat tgattcgaat cgtaaaatcg gtgttttgaa aaacgcgctt 301 ttttcgttct gtttcgggca tttattttct ttttttgttg tctgtgaact aaagtgaacc 361 gaagcaactt gtgaaatctt cggccattgt tgtgaaagag cggctgtctg ggcttgggtt 421 ctcctacctg gcgttataat cgccgcccct aaaataaaga aaaaagctat tgcttttatt 481 tgcggttaaa atatttgcgg gcttcaccag cggcgccttt cggaattgga ttcccgtgtt 541 cgaattcgga atcggaatcg ccagagctga tcttgaccag cccaagatcc gtatgcgacc 601 gctgccatgc tgctgagaca acgcctggac aacggctagg gctgtggata aggaacagga 661 tcaggatcgg gatcgagtca tggtcataga gtgcaacagg atgtggatca ggagtctgct 721 gctctgcttt tggttggtcg tcggaacaca aggaggagga ggaggtggag gtggacgcca 781 gctgttcggt ctccactccg acgaactggt ggcgggtgag gggcagctgg tggtgccacg 841 acgagtccat cccgatgggg cattcatgac ccactcgctg gactttgccc acgatcgtga 901 tcaccggcgg catcgccagc gacgaagttt gaaccttgag caggaggatg tggataaccc 961 agcggcggac ttgcatctcc agctgccgct ggccaacgag acactgcatc tggagctgac 1021 ggcgcacagc tacttcctgg cccccaattt ggtggtggag cggcatcgcc gggatctgcg 1081 cacgcggtca cctttgaacc cgcggcacct caactgccac tttcacggca aggtgcgcgg 1141 ccaacaggcc accaatgtgg ccatctccac ttgctccgga ctggtgggcc acatccggac 1201 ggccagtaat gagtacttca tcgagccctc caagcagcac gagccgcatc cggccagcgg 1261 tcatccgcac gtggtcttcc agcgctcctc agtgaaaccg aagcatgcct cgagaaagcg 1321 gaacaagcgc aaacggggcg gaggatcggg atcgggattg ggttcgggat ccggagcgga 1381 ggtcagcaac tgcggaacga gggagcctcg tcgacgaatg gagacgagac tggagtggca 1441 gtccaggggc aaggtgaagg tccagggagg tcgccagatc aggcggcacc acaagcacaa 1501 gagccaccac cagaaaaatc atcgggtgcc gcacaccaag ttcaagtacg agacgcagtt 1561 ccagacggag caggatcagc agcaggatca tccgcatccg catcccgaga ttcccaggcg 1621 gcggcgatcc atcagcagtc cacggcatgt ggagaccctg attgtggccg atgccaccat 1681 gtcggccttt cacaaggacc tcaacggcta cctgctgacc atcatgaaca tggtgtccgc 1741 cttgtacaag gaccccagca tcggcaactc catcgagatc gtggtggtgc gcatcatcca 1801 gctggacgag gaggagtccc agctccagct gaatctcacc cagaatgccc agaagaattt 1861 ggatcggttc tgcagttggc aacacaagtt gaacaagggc agcgagaagg atccccatca 1921 ccacgacgtg gccattctca tcacgcgcaa gaacatctgc gccaacaact gcatgaccct 1981 cggcctggcc aacgtgggtg gcatgtgcaa gccgaagcaa tcgtgcagcg tcaacgagga 2041 caacggcatc atgctctccc acacgatcac ccatgaattg ggccacaact tcggaatgtt 2101 ccacgatacc gcgaaaattg gctgccatcc gcgtgtgggt cccattgtgc acatcatgac 2161 gcccactttc ggggcggaca ccctgcaggt ttgctggtcg aactgcagcc gcaagtacat 2221 cacgcacttc ctggatcaag gattgggcga gtgcctggac gacccgccga cgccgctgga 2281 cgagtacaac tacaccggcg agctgccggg gatgcggtac aacgcgaggg gccagtgccg 2341 cctgcagttc aacctgacca ccgacagcga ggtgggcgcc tgttccacgc cccacgagct 2401 ctgctcgacg ctgtggtgca gggtgaacgg ggagtgcgtc acccacatgc ggcccaccgc 2461 cccggggacg ctgtgcgggc ggaacaagtg gtgccagaac ggcaagtgcg tgcgccgcga 2521 ggagctggcg gcggtcaacg ggggctgggg cgactggagc gagtggagcg agtgctcgcg 2581 cagctgcggc ggcggggtgt ccacccagca gcgggagtgc gacagcccgg tgcccgccaa 2641 tggcggcgtc ttctgcatcg gcgagcggaa gcggtacaag atctgccgga agcgtccgtg 2701 tccggcggag gagcccagct tccgggcgca gcagtgcgcg cgattcgaca acgtcagcta 2761 ccagggagcc acctacaagt ggctgccctt cttcgacaag aataatccct gcaagctgtt 2821 ctgcagcgac gtggacgaca cgataatcgc caactggggc tccacggttc tggacggaac 2881 gccctgcacg ctgggcacga acaacatgtg catcgacggc atctgcaagt tggttgcgat 2941 tggatcgtcg actcggaggt gcaggacgat cgctgcggtg tctgcggcgg ttctggcgat 3001 cagtgccagc cggtgaggga gaccttcgcg gatccgtttg ccgccaagga cggggcctat 3061 gtggagatcg tcaccattcc ggcgcgggcc aggcacatcc tcatccggga gcaggccaac 3121 tcggcg