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LOCUS XM_017153702 3720 bp mRNA linear INV 09-DEC-2024 thrombospondin type 1 motif B (AdamTS-B), transcript variant X1, mRNA. ACCESSION XM_017153702 VERSION XM_017153702.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153702.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3720 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3720 /gene="AdamTS-B" /note="ADAM metallopeptidase with thrombospondin type 1 motif B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065637" CDS 575..3673 /gene="AdamTS-B" /codon_start=1 /product="A disintegrin and metalloproteinase with thrombospondin motifs 7 isoform X1" /protein_id="XP_017009191.2" /db_xref="GeneID:108065637" /translation="MVIECNRMWIRSLLLCFWLVVGTQGGGGGGGGRQLFGLHSDELV AGEGQLVVPRRVHPDGAFMTHSLDFAHDRDHRRHRQRRSLNLEQEDVDNPAADLHLQL PLANETLHLELTAHSYFLAPNLVVERHRRDLRTRSPLNPRHLNCHFHGKVRGQQATNV AISTCSGLVGHIRTASNEYFIEPSKQHEPHPASGHPHVVFQRSSVKPKHASRKRNKRK RGGGSGSGLGSGSGAEVSNCGTREPRRRMETRLEWQSRGKVKVQGGRQIRRHHKHKSH HQKNHRVPHTKFKYETQFQTEQDQQQDHPHPHPEIPRRRRSISSPRHVETLIVADATM SAFHKDLNGYLLTIMNMVSALYKDPSIGNSIEIVVVRIIQLDEEESQLQLNLTQNAQK NLDRFCSWQHKLNKGSEKDPHHHDVAILITRKNICANNCMTLGLANVGGMCKPKQSCS VNEDNGIMLSHTITHELGHNFGMFHDTAKIGCHPRVGPIVHIMTPTFGADTLQVCWSN CSRKYITHFLDQGLGECLDDPPTPLDEYNYTGELPGMRYNARGQCRLQFNLTTDSEVG ACSTPHELCSTLWCRVNGECVTHMRPTAPGTLCGRNKWCQNGKCVRREELAAVNGGWG DWSEWSECSRSCGGGVSTQQRECDSPVPANGGVFCIGERKRYKICRKRPCPAEEPSFR AQQCARFDNVSYQGATYKWLPFFDKNNPCKLFCSDVDDTIIANWGSTVLDGTPCTLGT NNMCIDGICKKVGCDWIVDSEVQDDRCGVCGGSGDQCQPVRETFADPFAAKDGAYVEI VTIPARARHILIREQANSAHFLAIATANGDRFYLNGDSLISMPGEFEIAGAESLYDRV DEQETITIPQPIQHSISLYAIVRGNESNAGIFYEFTLPALNVSAGRQFLWRLSNWTSC SASCGGGVQHREPICQENGKGLADTLPCWTHAKNKRPPRQSRGCGEQPCPAHWWPGPW QFCPLTCRPPGGAASPPLRRRSVVCLDQHDVVVADTECGLLPKPPEMEPCESSLPDCR TK" misc_feature 719..1174 /gene="AdamTS-B" /note="Reprolysin family propeptide; Region: Pep_M12B_propep; pfam01562" /db_xref="CDD:460254" misc_feature 1541..2155 /gene="AdamTS-B" /note="Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that...; Region: ZnMc_ADAMTS_like; cd04273" /db_xref="CDD:239801" misc_feature order(1967..1972,1979..1981,1997..1999) /gene="AdamTS-B" /note="active site" /db_xref="CDD:239801" misc_feature 2201..2407 /gene="AdamTS-B" /note="ADAMTS cysteine-rich domain 2; Region: ADAMTS_CR_2; pfam17771" /db_xref="CDD:465496" misc_feature 2441..2599 /gene="AdamTS-B" /note="Thrombospondin type 1 repeats; Region: TSP1; smart00209" /db_xref="CDD:214559" misc_feature 2615..2905 /gene="AdamTS-B" /note="ADAMTS cysteine-rich domain; Region: ADAMTS_CR_3; pfam19236" /db_xref="CDD:437068" misc_feature 2909..3256 /gene="AdamTS-B" /note="ADAM-TS Spacer 1; Region: ADAMTS_spacer1; pfam05986" /db_xref="CDD:461796" misc_feature 3290..3463 /gene="AdamTS-B" /note="Thrombospondin type 1 domain; Region: TSP1_ADAMTS; pfam19030" /db_xref="CDD:465950" misc_feature 3473..3661 /gene="AdamTS-B" /note="Thrombospondin type 1 domain; Region: TSP1_ADAMTS; pfam19030" /db_xref="CDD:465950" ORIGIN 1 ttcacccgcg ctgattgtgc tgcctcgctt cctatagaga gccattaaga aaaatcagag 61 gaaaacgtcg atatatccga tacgacgccg gaacaaactg agactcttgt gcgaagtgtg 121 gataatatga tattttgatt tagttccgaa ttccgagcag cgcttatctg aagaaatgcc 181 gatatatgta tacctaaacc tatgccagat ataggaatat aaatttaaag cctgtgcgca 241 tgcccatgtt gaaccgaagc aacttgtgaa atcttcggcc attgttgtga aagagcggct 301 gtctgggctt gggttctcct acctggcgtt ataatcgccg cccctaaaat aaagaaaaaa 361 gctattgctt ttatttgcgg ttaaaatatt tgcgggcttc accagcggcg cctttcggaa 421 ttggattccc gtgttcgaat tcggaatcgg aatcgccaga gctgatcttg accagcccaa 481 gatccgtatg cgaccgctgc catgctgctg agacaacgcc tggacaacgg ctagggctgt 541 ggataaggaa caggatcagg atcgggatcg agtcatggtc atagagtgca acaggatgtg 601 gatcaggagt ctgctgctct gcttttggtt ggtcgtcgga acacaaggag gaggaggagg 661 tggaggtgga cgccagctgt tcggtctcca ctccgacgaa ctggtggcgg gtgaggggca 721 gctggtggtg ccacgacgag tccatcccga tggggcattc atgacccact cgctggactt 781 tgcccacgat cgtgatcacc ggcggcatcg ccagcgacga agtttgaacc ttgagcagga 841 ggatgtggat aacccagcgg cggacttgca tctccagctg ccgctggcca acgagacact 901 gcatctggag ctgacggcgc acagctactt cctggccccc aatttggtgg tggagcggca 961 tcgccgggat ctgcgcacgc ggtcaccttt gaacccgcgg cacctcaact gccactttca 1021 cggcaaggtg cgcggccaac aggccaccaa tgtggccatc tccacttgct ccggactggt 1081 gggccacatc cggacggcca gtaatgagta cttcatcgag ccctccaagc agcacgagcc 1141 gcatccggcc agcggtcatc cgcacgtggt cttccagcgc tcctcagtga aaccgaagca 1201 tgcctcgaga aagcggaaca agcgcaaacg gggcggagga tcgggatcgg gattgggttc 1261 gggatccgga gcggaggtca gcaactgcgg aacgagggag cctcgtcgac gaatggagac 1321 gagactggag tggcagtcca ggggcaaggt gaaggtccag ggaggtcgcc agatcaggcg 1381 gcaccacaag cacaagagcc accaccagaa aaatcatcgg gtgccgcaca ccaagttcaa 1441 gtacgagacg cagttccaga cggagcagga tcagcagcag gatcatccgc atccgcatcc 1501 cgagattccc aggcggcggc gatccatcag cagtccacgg catgtggaga ccctgattgt 1561 ggccgatgcc accatgtcgg cctttcacaa ggacctcaac ggctacctgc tgaccatcat 1621 gaacatggtg tccgccttgt acaaggaccc cagcatcggc aactccatcg agatcgtggt 1681 ggtgcgcatc atccagctgg acgaggagga gtcccagctc cagctgaatc tcacccagaa 1741 tgcccagaag aatttggatc ggttctgcag ttggcaacac aagttgaaca agggcagcga 1801 gaaggatccc catcaccacg acgtggccat tctcatcacg cgcaagaaca tctgcgccaa 1861 caactgcatg accctcggcc tggccaacgt gggtggcatg tgcaagccga agcaatcgtg 1921 cagcgtcaac gaggacaacg gcatcatgct ctcccacacg atcacccatg aattgggcca 1981 caacttcgga atgttccacg ataccgcgaa aattggctgc catccgcgtg tgggtcccat 2041 tgtgcacatc atgacgccca ctttcggggc ggacaccctg caggtttgct ggtcgaactg 2101 cagccgcaag tacatcacgc acttcctgga tcaaggattg ggcgagtgcc tggacgaccc 2161 gccgacgccg ctggacgagt acaactacac cggcgagctg ccggggatgc ggtacaacgc 2221 gaggggccag tgccgcctgc agttcaacct gaccaccgac agcgaggtgg gcgcctgttc 2281 cacgccccac gagctctgct cgacgctgtg gtgcagggtg aacggggagt gcgtcaccca 2341 catgcggccc accgccccgg ggacgctgtg cgggcggaac aagtggtgcc agaacggcaa 2401 gtgcgtgcgc cgcgaggagc tggcggcggt caacgggggc tggggcgact ggagcgagtg 2461 gagcgagtgc tcgcgcagct gcggcggcgg ggtgtccacc cagcagcggg agtgcgacag 2521 cccggtgccc gccaatggcg gcgtcttctg catcggcgag cggaagcggt acaagatctg 2581 ccggaagcgt ccgtgtccgg cggaggagcc cagcttccgg gcgcagcagt gcgcgcgatt 2641 cgacaacgtc agctaccagg gagccaccta caagtggctg cccttcttcg acaagaataa 2701 tccctgcaag ctgttctgca gcgacgtgga cgacacgata atcgccaact ggggctccac 2761 ggttctggac ggaacgccct gcacgctggg cacgaacaac atgtgcatcg acggcatctg 2821 caagaaagtt ggttgcgatt ggatcgtcga ctcggaggtg caggacgatc gctgcggtgt 2881 ctgcggcggt tctggcgatc agtgccagcc ggtgagggag accttcgcgg atccgtttgc 2941 cgccaaggac ggggcctatg tggagatcgt caccattccg gcgcgggcca ggcacatcct 3001 catccgggag caggccaact cggcgcactt cctggccatc gcgacggcga acggggatcg 3061 gttctatctg aacggcgata gcctcatctc gatgcccggc gagttcgaga tcgccggcgc 3121 cgagagcctc tacgatcggg tcgacgagca ggagaccatc acaatacctc agcccatcca 3181 gcattccata tcgctatacg cgattgtgcg cggcaatgag agcaacgctg gcattttcta 3241 cgagttcacg ctgccggcgc tgaatgtgag tgccggcagg cagttcctgt ggcggctgag 3301 caactggacc tcgtgctccg ccagctgtgg cgggggagtt cagcaccggg agcccatctg 3361 ccaggagaac ggcaagggtc tggctgatac gttgccctgt tggacgcacg ccaagaacaa 3421 aagacctcca cggcagtcgc gaggatgcgg cgagcagcca tgtcctgccc actggtggcc 3481 gggtccttgg caattctgtc ccctgacctg ccgtcctccg ggaggagccg cctctccgcc 3541 actccgccga cggtccgtcg tctgtctgga ccaacacgac gtggtggtgg ccgatacgga 3601 atgcggactc ctgccgaagc caccggaaat ggagccctgc gaatcctcgc tgcccgattg 3661 cagaaccaag tagcaagcat aaaagtcccc tacatattta ttgaaagtac ccggaagagt