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LOCUS XM_017153662 3588 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_017153662 VERSION XM_017153662.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153662.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3588 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3588 /gene="slgA" /note="proline dehydrogenase slgA; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108065619" CDS 155..2227 /gene="slgA" /codon_start=1 /product="proline dehydrogenase 1, mitochondrial isoform X1" /protein_id="XP_017009151.2" /db_xref="GeneID:108065619" /translation="MALLRSLSSQRTAISLVYGRNSSKSSSSAAVVAACRSYHQCGRR STTAAGEESSLSSSSDHHHHPASGINGARFLHSGNRPLQASTLVQPDLVAGEAVKRTA KQDSSQSQNPSPAGSPQRDPLDVTFNDPIAAFKSKTTGELMRAYLVYMICSSEKLVEH NMTLMKWSKNVLGQRLFTALMKATFYGHFVAGEDQIKIIPTLERLRSFGVKPILDYSV EEDISQEEAEKREVESSVSSAGEHKEEGSMPQYHVDKSFADRRYKVSSARTYFYLNEA TCERNMEIFIKCLEAVSDDDRKAPRAVATGATFGTGITAIKLTALGRPQLLLQLSEVI MRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYATLGDNKDVKEFLNNVTSDKEGILHLF PWSGIVDEDSQLSDTFRVPDPQTGQMRRLISQIPPKEEEMFRNMIRRLNTIVKAAADL DVRIMVDAEQTYFQPAISRITLEMMRKYNKDKAIVFNTYQCYLRETFREVNTDLEQAK RQNFYFGAKLVRGAYMDQERDRAKSLGYPDPVNPTFEATTDMYHKTLAECLRRIKLMK DCDDDARKIGIMVASHNEDTVRFAIQQMKEIGISPEDKVICFGQLLGMCDYITFPLGQ AGYSAYKYIPYGPVEEVLPYLSRRAQENKGVLKKIKKEKRLLLSEIRRRLLRGQLFYK PKGNYVPI" misc_feature 482..2185 /gene="slgA" /note="proline dehydrogenase; Region: PLN02681" /db_xref="CDD:215366" polyA_site 3588 /gene="slgA" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcattcggtt tcgtgcttct gcggcgtata caacgctcaa agcgtaatag aataaataat 61 aaaagcaaac aacagccgag atcggagcaa gtctcaatac ccttctcaga acccggagag 121 cagatagccc aaataagccg cagaatccct tgtaatggct ctacttcgtt cgctgagctc 181 ccaacgaaca gccatcagtt tggtctacgg ccgtaatagc agcaagtcga gcagttccgc 241 ggccgtcgtc gccgcctgcc ggagttacca tcagtgcggc aggaggagca ccacagcagc 301 cggcgaagaa tcttctctat catcatcatc ggatcatcat catcatcccg ctagcgggat 361 caatggcgct cgcttcttgc actccggcaa tcggccgctg caggcctcca ctctggtcca 421 accggacctg gtggccggcg aggcggtgaa gcggaccgcc aagcaggact cgtcgcagag 481 ccagaacccc tcgcccgctg gctcgccgca gagggatccc ctggacgtga ccttcaacga 541 tccgattgcc gccttcaaga gcaagacaac cggcgaactg atgcgcgcct atctggtcta 601 catgatctgt tccagcgaga agctggtcga gcacaacatg acgcttatga aatggtcaaa 661 gaacgtattg ggtcaacggt tatttacagc attgatgaag gcgaccttct atggccattt 721 tgtcgccggc gaggatcaga tcaagatcat acccacattg gaaaggctaa gatcgttcgg 781 cgttaagccg attctcgact attccgttga ggaggatatc agccaggagg aggctgagaa 841 acgagaagtt gagtcttccg tttccagtgc cggcgaacac aaggaggagg gcagcatgcc 901 gcagtatcat gtggacaagt ccttcgccga tcggcgctac aaggtgagca gtgctcgcac 961 ctacttctac ctgaacgagg ccacctgcga gcggaacatg gagatcttca tcaagtgtct 1021 ggaggccgtt tcggatgatg atcgcaaggc gccccgggca gtggccacgg gcgccacctt 1081 cggaacgggc attaccgcca ttaaactcac cgccctgggc cgtccacaat tgctgctgca 1141 actgtccgag gtgattatgc gcacacgcaa gtacatggag gacatggtgg gcggtcaggg 1201 caatgtgctg acccaccata agaccatcaa ggatctcgag aagtattatg caacgctggg 1261 cgacaataag gacgtgaaag agttcttgaa caatgtgacg tccgataagg agggaatcct 1321 gcatctgttc ccctggtcgg gcatcgtgga cgaggactcg cagctgagcg acacgttccg 1381 cgttcccgat ccccaaaccg gccagatgcg tcgactgatc tcacaaatac cgcccaaaga 1441 ggaggagatg ttcaggaaca tgatccgtcg cctcaacacg attgtaaagg ctgctgccga 1501 tctggatgtg cgcatcatgg tggatgcgga gcagacctac ttccagccgg ccatctcgcg 1561 catcaccctg gaaatgatgc gcaagtacaa caaggacaag gccattgtct tcaacacgta 1621 ccagtgctat ctgcgcgaaa cgttccgcga ggtgaacacc gatctggagc aggccaagcg 1681 ccagaacttc tatttcggag ccaagctggt gcgcggtgcc tatatggatc aggagcgtga 1741 ccgcgccaag tctctgggat atccggatcc ggtgaatccc accttcgagg ccaccacgga 1801 catgtatcac aagactttgg ccgagtgctt gcgacgcatt aagctgatga aggactgtga 1861 tgacgatgcc cggaaaattg gcattatggt ggcctcgcac aacgaggaca ccgtgcgctt 1921 tgccatccag cagatgaagg agatcggcat ttcgcccgag gacaaggtga tctgctttgg 1981 ccaactgttg ggcatgtgcg actacatcac cttcccactg ggccaggcgg gctactcggc 2041 gtacaagtac atcccgtatg gccctgtgga ggaggtgctg ccctacttgt cgcgccgtgc 2101 ccaggagaac aagggtgtgc tcaagaagat caagaaggag aagcgactgc tgctctccga 2161 gattcggcgt cgtctgctgc gcggccagct gttctacaag cccaaaggca actatgtgcc 2221 catctaagct ggcctggatg gacggaaact cactcactca tccgcataca cacacatgcc 2281 cccggtgcgg cagttatatc tgaggatata tcacggatat cgccaggaaa tcgatcgctt 2341 cgggcatatt ttaatgtttt ttttttgtcg ttcttactac tcttacgaaa ttcgcgtata 2401 tctacggtat atatatgaag gtcttgcaag gagcgaggat gtcttgctgc gggatctttc 2461 gggatcttcg ggatcttctt caccttcacc cacaaaacaa cttcaattag agacggtagc 2521 actgagcgat ggtcattttt tgatgaaaat atgtatattt ttacgtcttg ttgcaacaat 2581 aatctaaacg acttctgtat gtgtgttaca aagaaaacaa aaaatgaaaa aaaaaaactg 2641 aaaagcgtaa aaaaaagcgt gacgaaagga aaggaaacga atgtgggaat tccgcataga 2701 ggatattaaa aaaaaaaaac ggggattgaa ttaaagcgaa cattttttag catcgtaaca 2761 aaataaagca taaatcgata atggtatata cgtattatat acaaagtaat gagagcaaaa 2821 cgtttataga gatatatgta ccgataccga tctatatcca catagataca gatacatgta 2881 tgtgtatggc tgcattttag tctagattca ttaacttcgt gtttgtgcct cttcctcagt 2941 atcagttatc agtatatcag ttattagttt atccattctt aatttgcgat gtgatttcat 3001 gttggttacc ctaagttact accataaacc atatacatat atttatatag atcaatagcg 3061 aaggagagag tccagggcat ttgttcctcc agttcgtggc catcccccat ccgaaatagt 3121 caaataatac tgtccatagg aacaagggat accgcgcata cctataccta cctaaaccta 3181 gcgagttgta ttacaattat gctaaattaa cttaaatgta tatgtttaat ttagcactta 3241 aagaagcgat attataaaag tcattactac cgatagtcga tggatgagaa accgtaaccg 3301 taaccgtaac gcaaccgaaa ccgcctcttg tccccctgat ttccagtttc ctgtttctag 3361 ttaccaattt cccatttccg tttccaattt cccgtttcga ttgctcagac aactttatag 3421 acagacagac ttggccatat actaaggcgc gcagatcgaa ccgaatagtt ttttattatt 3481 atcctcatga ttattattat tgtattgcat aaacgctata aataaatgaa taaataattg 3541 tatgaatgtt aactatttca atgacaataa taaaatgtta aaaacgaa