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LOCUS XM_017153661 3684 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017153661 VERSION XM_017153661.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153661.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3684 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3684 /gene="slgA" /note="proline dehydrogenase slgA; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108065619" CDS 251..2323 /gene="slgA" /codon_start=1 /product="proline dehydrogenase 1, mitochondrial isoform X1" /protein_id="XP_017009150.2" /db_xref="GeneID:108065619" /translation="MALLRSLSSQRTAISLVYGRNSSKSSSSAAVVAACRSYHQCGRR STTAAGEESSLSSSSDHHHHPASGINGARFLHSGNRPLQASTLVQPDLVAGEAVKRTA KQDSSQSQNPSPAGSPQRDPLDVTFNDPIAAFKSKTTGELMRAYLVYMICSSEKLVEH NMTLMKWSKNVLGQRLFTALMKATFYGHFVAGEDQIKIIPTLERLRSFGVKPILDYSV EEDISQEEAEKREVESSVSSAGEHKEEGSMPQYHVDKSFADRRYKVSSARTYFYLNEA TCERNMEIFIKCLEAVSDDDRKAPRAVATGATFGTGITAIKLTALGRPQLLLQLSEVI MRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYATLGDNKDVKEFLNNVTSDKEGILHLF PWSGIVDEDSQLSDTFRVPDPQTGQMRRLISQIPPKEEEMFRNMIRRLNTIVKAAADL DVRIMVDAEQTYFQPAISRITLEMMRKYNKDKAIVFNTYQCYLRETFREVNTDLEQAK RQNFYFGAKLVRGAYMDQERDRAKSLGYPDPVNPTFEATTDMYHKTLAECLRRIKLMK DCDDDARKIGIMVASHNEDTVRFAIQQMKEIGISPEDKVICFGQLLGMCDYITFPLGQ AGYSAYKYIPYGPVEEVLPYLSRRAQENKGVLKKIKKEKRLLLSEIRRRLLRGQLFYK PKGNYVPI" misc_feature 578..2281 /gene="slgA" /note="proline dehydrogenase; Region: PLN02681" /db_xref="CDD:215366" polyA_site 3684 /gene="slgA" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttcgcgaatt cagacccttg cagtcgttct ctctccctct cgcgcgtgct cacgctctct 61 cccgcgcagc agcaacaaaa aaccaaaaac cctcgaaaag aacaacatag aataaaatac 121 aaaaatttta aattattatt atagtacttg tgtgtctttt gtgagcaaca gccgagatcg 181 gagcaagtct caataccctt ctcagaaccc ggagagcaga tagcccaaat aagccgcaga 241 atcccttgta atggctctac ttcgttcgct gagctcccaa cgaacagcca tcagtttggt 301 ctacggccgt aatagcagca agtcgagcag ttccgcggcc gtcgtcgccg cctgccggag 361 ttaccatcag tgcggcagga ggagcaccac agcagccggc gaagaatctt ctctatcatc 421 atcatcggat catcatcatc atcccgctag cgggatcaat ggcgctcgct tcttgcactc 481 cggcaatcgg ccgctgcagg cctccactct ggtccaaccg gacctggtgg ccggcgaggc 541 ggtgaagcgg accgccaagc aggactcgtc gcagagccag aacccctcgc ccgctggctc 601 gccgcagagg gatcccctgg acgtgacctt caacgatccg attgccgcct tcaagagcaa 661 gacaaccggc gaactgatgc gcgcctatct ggtctacatg atctgttcca gcgagaagct 721 ggtcgagcac aacatgacgc ttatgaaatg gtcaaagaac gtattgggtc aacggttatt 781 tacagcattg atgaaggcga ccttctatgg ccattttgtc gccggcgagg atcagatcaa 841 gatcataccc acattggaaa ggctaagatc gttcggcgtt aagccgattc tcgactattc 901 cgttgaggag gatatcagcc aggaggaggc tgagaaacga gaagttgagt cttccgtttc 961 cagtgccggc gaacacaagg aggagggcag catgccgcag tatcatgtgg acaagtcctt 1021 cgccgatcgg cgctacaagg tgagcagtgc tcgcacctac ttctacctga acgaggccac 1081 ctgcgagcgg aacatggaga tcttcatcaa gtgtctggag gccgtttcgg atgatgatcg 1141 caaggcgccc cgggcagtgg ccacgggcgc caccttcgga acgggcatta ccgccattaa 1201 actcaccgcc ctgggccgtc cacaattgct gctgcaactg tccgaggtga ttatgcgcac 1261 acgcaagtac atggaggaca tggtgggcgg tcagggcaat gtgctgaccc accataagac 1321 catcaaggat ctcgagaagt attatgcaac gctgggcgac aataaggacg tgaaagagtt 1381 cttgaacaat gtgacgtccg ataaggaggg aatcctgcat ctgttcccct ggtcgggcat 1441 cgtggacgag gactcgcagc tgagcgacac gttccgcgtt cccgatcccc aaaccggcca 1501 gatgcgtcga ctgatctcac aaataccgcc caaagaggag gagatgttca ggaacatgat 1561 ccgtcgcctc aacacgattg taaaggctgc tgccgatctg gatgtgcgca tcatggtgga 1621 tgcggagcag acctacttcc agccggccat ctcgcgcatc accctggaaa tgatgcgcaa 1681 gtacaacaag gacaaggcca ttgtcttcaa cacgtaccag tgctatctgc gcgaaacgtt 1741 ccgcgaggtg aacaccgatc tggagcaggc caagcgccag aacttctatt tcggagccaa 1801 gctggtgcgc ggtgcctata tggatcagga gcgtgaccgc gccaagtctc tgggatatcc 1861 ggatccggtg aatcccacct tcgaggccac cacggacatg tatcacaaga ctttggccga 1921 gtgcttgcga cgcattaagc tgatgaagga ctgtgatgac gatgcccgga aaattggcat 1981 tatggtggcc tcgcacaacg aggacaccgt gcgctttgcc atccagcaga tgaaggagat 2041 cggcatttcg cccgaggaca aggtgatctg ctttggccaa ctgttgggca tgtgcgacta 2101 catcaccttc ccactgggcc aggcgggcta ctcggcgtac aagtacatcc cgtatggccc 2161 tgtggaggag gtgctgccct acttgtcgcg ccgtgcccag gagaacaagg gtgtgctcaa 2221 gaagatcaag aaggagaagc gactgctgct ctccgagatt cggcgtcgtc tgctgcgcgg 2281 ccagctgttc tacaagccca aaggcaacta tgtgcccatc taagctggcc tggatggacg 2341 gaaactcact cactcatccg catacacaca catgcccccg gtgcggcagt tatatctgag 2401 gatatatcac ggatatcgcc aggaaatcga tcgcttcggg catattttaa tgtttttttt 2461 ttgtcgttct tactactctt acgaaattcg cgtatatcta cggtatatat atgaaggtct 2521 tgcaaggagc gaggatgtct tgctgcggga tctttcggga tcttcgggat cttcttcacc 2581 ttcacccaca aaacaacttc aattagagac ggtagcactg agcgatggtc attttttgat 2641 gaaaatatgt atatttttac gtcttgttgc aacaataatc taaacgactt ctgtatgtgt 2701 gttacaaaga aaacaaaaaa tgaaaaaaaa aaactgaaaa gcgtaaaaaa aagcgtgacg 2761 aaaggaaagg aaacgaatgt gggaattccg catagaggat attaaaaaaa aaaaacgggg 2821 attgaattaa agcgaacatt ttttagcatc gtaacaaaat aaagcataaa tcgataatgg 2881 tatatacgta ttatatacaa agtaatgaga gcaaaacgtt tatagagata tatgtaccga 2941 taccgatcta tatccacata gatacagata catgtatgtg tatggctgca ttttagtcta 3001 gattcattaa cttcgtgttt gtgcctcttc ctcagtatca gttatcagta tatcagttat 3061 tagtttatcc attcttaatt tgcgatgtga tttcatgttg gttaccctaa gttactacca 3121 taaaccatat acatatattt atatagatca atagcgaagg agagagtcca gggcatttgt 3181 tcctccagtt cgtggccatc ccccatccga aatagtcaaa taatactgtc cataggaaca 3241 agggataccg cgcataccta tacctaccta aacctagcga gttgtattac aattatgcta 3301 aattaactta aatgtatatg tttaatttag cacttaaaga agcgatatta taaaagtcat 3361 tactaccgat agtcgatgga tgagaaaccg taaccgtaac cgtaacgcaa ccgaaaccgc 3421 ctcttgtccc cctgatttcc agtttcctgt ttctagttac caatttccca tttccgtttc 3481 caatttcccg tttcgattgc tcagacaact ttatagacag acagacttgg ccatatacta 3541 aggcgcgcag atcgaaccga atagtttttt attattatcc tcatgattat tattattgta 3601 ttgcataaac gctataaata aatgaataaa taattgtatg aatgttaact atttcaatga 3661 caataataaa atgttaaaaa cgaa