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PREDICTED: Drosophila takahashii stoned A (stnA), transcript


LOCUS       XM_017153656            2712 bp    mRNA    linear   INV 09-DEC-2024
            variant X4, mRNA.
ACCESSION   XM_017153656
VERSION     XM_017153656.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153656.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2712
                     /gene="stnA"
                     /note="stoned A; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108065617"
     CDS             133..2712
                     /gene="stnA"
                     /codon_start=1
                     /product="protein stoned-A"
                     /protein_id="XP_017009145.2"
                     /db_xref="GeneID:108065617"
                     /translation="MLKLPKGLKKKKKKSKKDQELFTEEELEQYKRDLRAKQEAAATK
                     SDAGESDGAASDVEAHHEPVASNSGLVSGSGSGSGYHAPGSSSSNSHQQPGDQSQGAA
                     GGDEEWAKFKALTSGVDSILHKTQDELDRIKKESFYQRLPSAAEKKKQEEEEAARLEA
                     EREERERQRLGQIEAQRDKLAEAVVQLSESEEEAGDYEADDIFATDYIEAITSGELQL
                     AVVPDSPVLADDGPDPFDTAYAEKVIVGADRAKGNKKLVSLGAAVEVLSGRVDREHAV
                     ALANPKRKLRKGIQNLLLSESVELADPEADLLAAAANAEPQHNLLDDLDEELPESSAP
                     IDLSVSLHLHLIKPKPVEEEEEQEQQDLGNQLLNPDLFEFDALKDEEDDEFAELAAES
                     LTKKEEVTVVSKVALPVEELPTEAFGEGSWAEFEAQPEQETGKPKRPPPPVRPPTGPH
                     IVPGAIYVSDDEEENPDDDPFNTNYAEQVIKKTTVLEEDDDFDPRAEEEPATGSASLA
                     APTRDLLAGSATDLSQVVPAPLAPTLSVDQDPEDFDPFDTSAISALVQPKATELRFLE
                     RELLNQSSAGGVTIKHSLSDPDFDPRADQETPAEPQVKVEQIQTDFDTARRKSSLSLN
                     IQAKTVGFLVPAADLLGAGNELGANKKPLTPYYAPTGNPLQEREREAEDVDPFDTSYV
                     PEAKLSDIELKHIEKDLISEPSNLRHSLSDPDFDPRAPPTPVPAEVLLAVEENIDIKV
                     LTPAQERKKLTNSVGAADSEEDIDPFDTSIAANLRPGQTELKLLENELLPETRTSVTD
                     VLDVQSDAQELGFGDKVLTPSTHSRPALPAHNLDPFDTSIAENLVPGETEIKLLESEL
                     IER"
ORIGIN      
        1 ctacctcctc tgccgacgtc gctgctggcg aaaagcactt cctatggaat tttacgacat
       61 tttattcatt ctgtgctaga tttcccgata gttcaaatca gagaccgatc tcgatgtctc
      121 cgcaattaga taatgcttaa gctaccaaag ggcctaaaaa agaaaaagaa gaagtcgaaa
      181 aaggaccagg agctcttcac cgaggaagag ctcgagcagt acaagcgcga cctaagggcc
      241 aaacaggagg cggcggccac caaatcggac gccggtgaat ccgacggagc ggcctcagac
      301 gttgaagccc accacgagcc agtagccagc aactcgggat tggtatcggg atcgggatcg
      361 ggatccggct atcacgcacc aggatcatcc tctagtaact cccaccaaca gccgggagat
      421 caaagtcagg gagctgccgg cggcgacgag gagtgggcca agttcaaggc actcacctcc
      481 ggcgtcgata gcatcctaca caagacccag gacgagctcg atcggatcaa gaaggagtcc
      541 ttctaccagc gcctgccctc ggccgccgag aagaagaaac aagaggagga ggaggccgcc
      601 cgccttgaag ccgagcgaga ggagcgggag aggcagcgtc tggggcagat cgaggctcag
      661 cgggacaagc tagccgaagc ggttgtccag ctatccgaat cggaggagga ggccggcgac
      721 tatgaggccg atgacatctt cgctaccgat tacattgagg ccatcaccag cggagagctc
      781 caactagccg ttgtcccgga ttccccggtt ctcgccgacg acggacccga tccctttgac
      841 accgcctacg cagagaaggt tattgttggc gccgatcggg caaagggaaa caagaagcta
      901 gtgagtctcg gggctgccgt tgaggtgcta tctggtcgcg tggaccgcga gcacgccgtt
      961 gcattagcga atcccaagcg taaattgcgg aagggcatcc agaatctcct gctcagcgag
     1021 agcgtagagc tagccgatcc ggaggcggat cttctggccg ccgcggccaa cgccgagccg
     1081 cagcataatc tactcgacga tctcgacgag gaactgcccg agtcctcggc ccccatagat
     1141 ctcagtgttt cgttgcattt gcacctaata aaacccaagc ccgtcgagga ggaggaggag
     1201 caggagcagc aggatctggg aaatcagctg ctcaacccgg atctattcga gttcgatgcc
     1261 ctcaaggacg aggaggacga cgagtttgct gaactagccg ccgagtcact gacgaaaaag
     1321 gaggaggtca ctgtcgtcag caaggttgct ctgcccgtcg aggaactgcc aactgaagcg
     1381 tttggagaag gcagctgggc tgaatttgaa gctcagccgg aacaagaaac aggaaagccc
     1441 aagcgtccgc caccaccagt ccgtccgcct acaggacccc acatcgtgcc cggtgcaatt
     1501 tacgtttcag acgacgagga ggaaaatcct gacgacgatc cttttaacac aaactacgcc
     1561 gaacaggtga tcaagaagac caccgtactc gaggaagacg acgacttcga cccacgtgcc
     1621 gaggaggaac cggccactgg gtcagcctct ctagcggctc caacccgcga tcttcttgct
     1681 ggcagtgcta ccgatctcag ccaggtggtt cccgcgccct tggcacctac tttaagtgtc
     1741 gaccaggatc cagaggactt cgatcccttc gacacctcag ccatatcggc tttggtgcag
     1801 cccaaggcca cggaactacg ctttttggag cgcgagctgc ttaaccagtc cagcgcagga
     1861 ggagtcacta tcaagcactc cctgagcgat ccggactttg atccacgagc ggatcaggaa
     1921 acgccagcgg agccgcaagt gaaagtagaa caaatacaga cggatttcga caccgcccgg
     1981 cgaaagtcct ccttgagtct gaacatacag gccaagactg tgggctttct ggtgccggca
     2041 gcggatctgc tcggagcggg taatgagttg ggggcgaata agaagccatt aacgccatac
     2101 tacgcaccaa ctggcaatcc tttgcaggag cgagagcgcg aagccgaaga cgttgatccc
     2161 ttcgacacgt catacgtgcc cgaggcgaag cttagcgata tagagctgaa gcatatagaa
     2221 aaggacctga tttctgaacc ttccaatctg cggcacagcc tctccgaccc cgatttcgat
     2281 cctcgggctc cacccactcc ggttcccgcc gaagtcttgt tggccgtcga ggagaatatc
     2341 gacatcaagg tcttgacacc cgcccaggag cgtaagaagc taaccaattc cgtcggagca
     2401 gccgattcgg aggaggacat tgatcccttt gacacctcca tagcggcgaa tctccgaccg
     2461 ggtcagacgg aactgaagct tttggaaaac gaacttctgc cggagacaag gacgtcggta
     2521 accgacgtcc tagacgttca gagcgacgct caggagttgg gttttggcga taaggtactc
     2581 acaccctcga cgcactcgag acctgccctt cccgctcaca atcttgatcc gtttgacact
     2641 tccattgcgg agaatcttgt gcccggcgag acagagatca aactgctcga aagcgaactg
     2701 attgagcgct aa