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PREDICTED: Drosophila takahashii stoned A (stnA), transcript


LOCUS       XM_017153655            2847 bp    mRNA    linear   INV 09-DEC-2024
            variant X3, mRNA.
ACCESSION   XM_017153655
VERSION     XM_017153655.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153655.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2847
                     /gene="stnA"
                     /note="stoned A; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108065617"
     CDS             268..2847
                     /gene="stnA"
                     /codon_start=1
                     /product="protein stoned-A"
                     /protein_id="XP_017009144.2"
                     /db_xref="GeneID:108065617"
                     /translation="MLKLPKGLKKKKKKSKKDQELFTEEELEQYKRDLRAKQEAAATK
                     SDAGESDGAASDVEAHHEPVASNSGLVSGSGSGSGYHAPGSSSSNSHQQPGDQSQGAA
                     GGDEEWAKFKALTSGVDSILHKTQDELDRIKKESFYQRLPSAAEKKKQEEEEAARLEA
                     EREERERQRLGQIEAQRDKLAEAVVQLSESEEEAGDYEADDIFATDYIEAITSGELQL
                     AVVPDSPVLADDGPDPFDTAYAEKVIVGADRAKGNKKLVSLGAAVEVLSGRVDREHAV
                     ALANPKRKLRKGIQNLLLSESVELADPEADLLAAAANAEPQHNLLDDLDEELPESSAP
                     IDLSVSLHLHLIKPKPVEEEEEQEQQDLGNQLLNPDLFEFDALKDEEDDEFAELAAES
                     LTKKEEVTVVSKVALPVEELPTEAFGEGSWAEFEAQPEQETGKPKRPPPPVRPPTGPH
                     IVPGAIYVSDDEEENPDDDPFNTNYAEQVIKKTTVLEEDDDFDPRAEEEPATGSASLA
                     APTRDLLAGSATDLSQVVPAPLAPTLSVDQDPEDFDPFDTSAISALVQPKATELRFLE
                     RELLNQSSAGGVTIKHSLSDPDFDPRADQETPAEPQVKVEQIQTDFDTARRKSSLSLN
                     IQAKTVGFLVPAADLLGAGNELGANKKPLTPYYAPTGNPLQEREREAEDVDPFDTSYV
                     PEAKLSDIELKHIEKDLISEPSNLRHSLSDPDFDPRAPPTPVPAEVLLAVEENIDIKV
                     LTPAQERKKLTNSVGAADSEEDIDPFDTSIAANLRPGQTELKLLENELLPETRTSVTD
                     VLDVQSDAQELGFGDKVLTPSTHSRPALPAHNLDPFDTSIAENLVPGETEIKLLESEL
                     IER"
ORIGIN      
        1 tgccgacgtc gctgctggcg aaaagcactt cctatggaat tttacgacat tttattcatt
       61 ctgtgctaga tttcccgata gttcaaatca gagttccaag accccatcca actagaacca
      121 aactaaatcc tacgtagccg ccgtaaccac gtaaccacgt taccacgtcc accaccttca
      181 tctccagctc gattttgttt tcgacccgga gtcagtaagt ttcacgacct atttgcagac
      241 cgatctcgat gtctccgcaa ttagataatg cttaagctac caaagggcct aaaaaagaaa
      301 aagaagaagt cgaaaaagga ccaggagctc ttcaccgagg aagagctcga gcagtacaag
      361 cgcgacctaa gggccaaaca ggaggcggcg gccaccaaat cggacgccgg tgaatccgac
      421 ggagcggcct cagacgttga agcccaccac gagccagtag ccagcaactc gggattggta
      481 tcgggatcgg gatcgggatc cggctatcac gcaccaggat catcctctag taactcccac
      541 caacagccgg gagatcaaag tcagggagct gccggcggcg acgaggagtg ggccaagttc
      601 aaggcactca cctccggcgt cgatagcatc ctacacaaga cccaggacga gctcgatcgg
      661 atcaagaagg agtccttcta ccagcgcctg ccctcggccg ccgagaagaa gaaacaagag
      721 gaggaggagg ccgcccgcct tgaagccgag cgagaggagc gggagaggca gcgtctgggg
      781 cagatcgagg ctcagcggga caagctagcc gaagcggttg tccagctatc cgaatcggag
      841 gaggaggccg gcgactatga ggccgatgac atcttcgcta ccgattacat tgaggccatc
      901 accagcggag agctccaact agccgttgtc ccggattccc cggttctcgc cgacgacgga
      961 cccgatccct ttgacaccgc ctacgcagag aaggttattg ttggcgccga tcgggcaaag
     1021 ggaaacaaga agctagtgag tctcggggct gccgttgagg tgctatctgg tcgcgtggac
     1081 cgcgagcacg ccgttgcatt agcgaatccc aagcgtaaat tgcggaaggg catccagaat
     1141 ctcctgctca gcgagagcgt agagctagcc gatccggagg cggatcttct ggccgccgcg
     1201 gccaacgccg agccgcagca taatctactc gacgatctcg acgaggaact gcccgagtcc
     1261 tcggccccca tagatctcag tgtttcgttg catttgcacc taataaaacc caagcccgtc
     1321 gaggaggagg aggagcagga gcagcaggat ctgggaaatc agctgctcaa cccggatcta
     1381 ttcgagttcg atgccctcaa ggacgaggag gacgacgagt ttgctgaact agccgccgag
     1441 tcactgacga aaaaggagga ggtcactgtc gtcagcaagg ttgctctgcc cgtcgaggaa
     1501 ctgccaactg aagcgtttgg agaaggcagc tgggctgaat ttgaagctca gccggaacaa
     1561 gaaacaggaa agcccaagcg tccgccacca ccagtccgtc cgcctacagg accccacatc
     1621 gtgcccggtg caatttacgt ttcagacgac gaggaggaaa atcctgacga cgatcctttt
     1681 aacacaaact acgccgaaca ggtgatcaag aagaccaccg tactcgagga agacgacgac
     1741 ttcgacccac gtgccgagga ggaaccggcc actgggtcag cctctctagc ggctccaacc
     1801 cgcgatcttc ttgctggcag tgctaccgat ctcagccagg tggttcccgc gcccttggca
     1861 cctactttaa gtgtcgacca ggatccagag gacttcgatc ccttcgacac ctcagccata
     1921 tcggctttgg tgcagcccaa ggccacggaa ctacgctttt tggagcgcga gctgcttaac
     1981 cagtccagcg caggaggagt cactatcaag cactccctga gcgatccgga ctttgatcca
     2041 cgagcggatc aggaaacgcc agcggagccg caagtgaaag tagaacaaat acagacggat
     2101 ttcgacaccg cccggcgaaa gtcctccttg agtctgaaca tacaggccaa gactgtgggc
     2161 tttctggtgc cggcagcgga tctgctcgga gcgggtaatg agttgggggc gaataagaag
     2221 ccattaacgc catactacgc accaactggc aatcctttgc aggagcgaga gcgcgaagcc
     2281 gaagacgttg atcccttcga cacgtcatac gtgcccgagg cgaagcttag cgatatagag
     2341 ctgaagcata tagaaaagga cctgatttct gaaccttcca atctgcggca cagcctctcc
     2401 gaccccgatt tcgatcctcg ggctccaccc actccggttc ccgccgaagt cttgttggcc
     2461 gtcgaggaga atatcgacat caaggtcttg acacccgccc aggagcgtaa gaagctaacc
     2521 aattccgtcg gagcagccga ttcggaggag gacattgatc cctttgacac ctccatagcg
     2581 gcgaatctcc gaccgggtca gacggaactg aagcttttgg aaaacgaact tctgccggag
     2641 acaaggacgt cggtaaccga cgtcctagac gttcagagcg acgctcagga gttgggtttt
     2701 ggcgataagg tactcacacc ctcgacgcac tcgagacctg cccttcccgc tcacaatctt
     2761 gatccgtttg acacttccat tgcggagaat cttgtgcccg gcgagacaga gatcaaactg
     2821 ctcgaaagcg aactgattga gcgctaa