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PREDICTED: Drosophila takahashii stoned A (stnA), transcript


LOCUS       XM_017153654            2881 bp    mRNA    linear   INV 09-DEC-2024
            variant X2, mRNA.
ACCESSION   XM_017153654
VERSION     XM_017153654.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153654.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2881
                     /gene="stnA"
                     /note="stoned A; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108065617"
     CDS             302..2881
                     /gene="stnA"
                     /codon_start=1
                     /product="protein stoned-A"
                     /protein_id="XP_017009143.2"
                     /db_xref="GeneID:108065617"
                     /translation="MLKLPKGLKKKKKKSKKDQELFTEEELEQYKRDLRAKQEAAATK
                     SDAGESDGAASDVEAHHEPVASNSGLVSGSGSGSGYHAPGSSSSNSHQQPGDQSQGAA
                     GGDEEWAKFKALTSGVDSILHKTQDELDRIKKESFYQRLPSAAEKKKQEEEEAARLEA
                     EREERERQRLGQIEAQRDKLAEAVVQLSESEEEAGDYEADDIFATDYIEAITSGELQL
                     AVVPDSPVLADDGPDPFDTAYAEKVIVGADRAKGNKKLVSLGAAVEVLSGRVDREHAV
                     ALANPKRKLRKGIQNLLLSESVELADPEADLLAAAANAEPQHNLLDDLDEELPESSAP
                     IDLSVSLHLHLIKPKPVEEEEEQEQQDLGNQLLNPDLFEFDALKDEEDDEFAELAAES
                     LTKKEEVTVVSKVALPVEELPTEAFGEGSWAEFEAQPEQETGKPKRPPPPVRPPTGPH
                     IVPGAIYVSDDEEENPDDDPFNTNYAEQVIKKTTVLEEDDDFDPRAEEEPATGSASLA
                     APTRDLLAGSATDLSQVVPAPLAPTLSVDQDPEDFDPFDTSAISALVQPKATELRFLE
                     RELLNQSSAGGVTIKHSLSDPDFDPRADQETPAEPQVKVEQIQTDFDTARRKSSLSLN
                     IQAKTVGFLVPAADLLGAGNELGANKKPLTPYYAPTGNPLQEREREAEDVDPFDTSYV
                     PEAKLSDIELKHIEKDLISEPSNLRHSLSDPDFDPRAPPTPVPAEVLLAVEENIDIKV
                     LTPAQERKKLTNSVGAADSEEDIDPFDTSIAANLRPGQTELKLLENELLPETRTSVTD
                     VLDVQSDAQELGFGDKVLTPSTHSRPALPAHNLDPFDTSIAENLVPGETEIKLLESEL
                     IER"
ORIGIN      
        1 ttacgacatt ttattcattc tgtgctagat ttcccgatag ttcaaatcag aggtaaagcc
       61 ccggaaggga atcgaaacaa aaatacctga aattcgctat aactaacaca acgctgcagt
      121 ttttaatgtt ggctctttgc taattttaat atatttccaa aagtattggg tccaaaaaga
      181 aggggtgaaa tactaatgcc cagtgaaatt gtgttttttt ttcgtacgaa tcaagttttt
      241 tattgagata aaagtgtgta caagtgtgag acaccgatct cgatgtctcc gcaattagat
      301 aatgcttaag ctaccaaagg gcctaaaaaa gaaaaagaag aagtcgaaaa aggaccagga
      361 gctcttcacc gaggaagagc tcgagcagta caagcgcgac ctaagggcca aacaggaggc
      421 ggcggccacc aaatcggacg ccggtgaatc cgacggagcg gcctcagacg ttgaagccca
      481 ccacgagcca gtagccagca actcgggatt ggtatcggga tcgggatcgg gatccggcta
      541 tcacgcacca ggatcatcct ctagtaactc ccaccaacag ccgggagatc aaagtcaggg
      601 agctgccggc ggcgacgagg agtgggccaa gttcaaggca ctcacctccg gcgtcgatag
      661 catcctacac aagacccagg acgagctcga tcggatcaag aaggagtcct tctaccagcg
      721 cctgccctcg gccgccgaga agaagaaaca agaggaggag gaggccgccc gccttgaagc
      781 cgagcgagag gagcgggaga ggcagcgtct ggggcagatc gaggctcagc gggacaagct
      841 agccgaagcg gttgtccagc tatccgaatc ggaggaggag gccggcgact atgaggccga
      901 tgacatcttc gctaccgatt acattgaggc catcaccagc ggagagctcc aactagccgt
      961 tgtcccggat tccccggttc tcgccgacga cggacccgat ccctttgaca ccgcctacgc
     1021 agagaaggtt attgttggcg ccgatcgggc aaagggaaac aagaagctag tgagtctcgg
     1081 ggctgccgtt gaggtgctat ctggtcgcgt ggaccgcgag cacgccgttg cattagcgaa
     1141 tcccaagcgt aaattgcgga agggcatcca gaatctcctg ctcagcgaga gcgtagagct
     1201 agccgatccg gaggcggatc ttctggccgc cgcggccaac gccgagccgc agcataatct
     1261 actcgacgat ctcgacgagg aactgcccga gtcctcggcc cccatagatc tcagtgtttc
     1321 gttgcatttg cacctaataa aacccaagcc cgtcgaggag gaggaggagc aggagcagca
     1381 ggatctggga aatcagctgc tcaacccgga tctattcgag ttcgatgccc tcaaggacga
     1441 ggaggacgac gagtttgctg aactagccgc cgagtcactg acgaaaaagg aggaggtcac
     1501 tgtcgtcagc aaggttgctc tgcccgtcga ggaactgcca actgaagcgt ttggagaagg
     1561 cagctgggct gaatttgaag ctcagccgga acaagaaaca ggaaagccca agcgtccgcc
     1621 accaccagtc cgtccgccta caggacccca catcgtgccc ggtgcaattt acgtttcaga
     1681 cgacgaggag gaaaatcctg acgacgatcc ttttaacaca aactacgccg aacaggtgat
     1741 caagaagacc accgtactcg aggaagacga cgacttcgac ccacgtgccg aggaggaacc
     1801 ggccactggg tcagcctctc tagcggctcc aacccgcgat cttcttgctg gcagtgctac
     1861 cgatctcagc caggtggttc ccgcgccctt ggcacctact ttaagtgtcg accaggatcc
     1921 agaggacttc gatcccttcg acacctcagc catatcggct ttggtgcagc ccaaggccac
     1981 ggaactacgc tttttggagc gcgagctgct taaccagtcc agcgcaggag gagtcactat
     2041 caagcactcc ctgagcgatc cggactttga tccacgagcg gatcaggaaa cgccagcgga
     2101 gccgcaagtg aaagtagaac aaatacagac ggatttcgac accgcccggc gaaagtcctc
     2161 cttgagtctg aacatacagg ccaagactgt gggctttctg gtgccggcag cggatctgct
     2221 cggagcgggt aatgagttgg gggcgaataa gaagccatta acgccatact acgcaccaac
     2281 tggcaatcct ttgcaggagc gagagcgcga agccgaagac gttgatccct tcgacacgtc
     2341 atacgtgccc gaggcgaagc ttagcgatat agagctgaag catatagaaa aggacctgat
     2401 ttctgaacct tccaatctgc ggcacagcct ctccgacccc gatttcgatc ctcgggctcc
     2461 acccactccg gttcccgccg aagtcttgtt ggccgtcgag gagaatatcg acatcaaggt
     2521 cttgacaccc gcccaggagc gtaagaagct aaccaattcc gtcggagcag ccgattcgga
     2581 ggaggacatt gatccctttg acacctccat agcggcgaat ctccgaccgg gtcagacgga
     2641 actgaagctt ttggaaaacg aacttctgcc ggagacaagg acgtcggtaa ccgacgtcct
     2701 agacgttcag agcgacgctc aggagttggg ttttggcgat aaggtactca caccctcgac
     2761 gcactcgaga cctgcccttc ccgctcacaa tcttgatccg tttgacactt ccattgcgga
     2821 gaatcttgtg cccggcgaga cagagatcaa actgctcgaa agcgaactga ttgagcgcta
     2881 a