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LOCUS XM_017153652 6074 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017153652 VERSION XM_017153652.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017153652.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6074 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6074 /gene="stnB" /note="stoned B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108065616" CDS 1..3792 /gene="stnB" /codon_start=1 /product="protein stoned-B" /protein_id="XP_017009141.2" /db_xref="GeneID:108065616" /translation="MANPFLMDDDLDGGDMTANPFLMQSEPEPSTDNPFGAATGASNP FAFGGDDLETGAEPEAEAAHDSDLDPAMSFFGTTIEAEDDALSLKSGAEEEDEGGKKP AQAQQHAHPPPPRPQAPPQSTQDLISTVSNQLEETSSELLGRIPATRSPSPVSMRDLH SPSPTPDSGLADLLDVSVDSGSSAHTQGMDVDLIGGVAGGVPLDNPFAVPTAVPNIQA AAPLPATPVKQPPRPPPPRPAPPRPAPPGQMAPQRPPPPVAAAAPAAAEADDLLDMFG TTSSKPVKPPPPKSKEDILSLFEQPQAPPAPKPDLLHDDLPEAKAEDVPPGQDEPDEG EGDGTTSRDEPVFTSLLIRPDESTHDITSQPQAATGLERQANHMAAPPETASRQRAPT PDIEITTVEDLPRSDDEDEDERDVKQEPEVEAEPQIEPETEPEIISDHSPPTESFVTT QMALANDEPLTSEPEPEQMDTGLDFPLATSDLASGQLSANPFASPEEEEEPSFAPVPA VVANIFAVDDLEPEVEPPTTEVAPSYTANIFAAEPDEFDAFSAKFDSVKKDNISILEG FGGSGAITPTGGDAWGDSAFGSATISANAFGDTNSADDGFGNEDDDFYAMQAPARADS VESVDKEFSVVIRPKAEGSGGVAPQLAPPPPPARAANQAQTTSPPGSTVNPFEDVSGF PAPGPPPTDGSAMKRTDSQDTPQTPLYDEDVSQPLEEFPRLHYVGPGWEMQLRQPNKK KITGQRFWKKIFVRLVVQNDVPVVQLLNQAGDKQPFQELPLQPSYSVSEIGAQQYDQF GKIFTMKLQYIFYKERPGVRPGQVTKAERITNKLTKFAQYAIAGDYEGVKEFGSDLKK LGLPVEHAPQSSQLFKIGSMNYEDMKQFSVCIEEALFKLPALRERALTYKMEEVQVTA VDEITVEQDFEGKILKQIARVRLFFLAFLTGMPTIELGVNDMWRQGKEVVGRHDIIPV ATEEWIRLEAVEFHSVVNQQEYERTRTIKFQPPDANYIELLRFRVRPPKNRELPLQLK ATWCVTGNKVELRADILVPGFTSRKLGQIPCEDVSVRFPIPECWIYLFRVEKHFRYGS VKSAHRRTGKIKGIERILGAVDTLQESLIEVTSGQAKYEHHHRAIVWRCPRLPKEGQG AYTTHQLVCRMALTSYDQIPSELAPYAFVEFTMPATQVSHTTVRSVSVQDSDADEPPE KYVRYLARHEYKVGIETTHGESTNAYLAATRPIREEPPSTATKPTASPVPPSDSDSDS N" misc_feature 2692..3660 /gene="stnB" /note="C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD); Region: AP_MHD_Cterm; cl10970" /db_xref="CDD:472082" polyA_site 6074 /gene="stnB" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atggccaatc cctttttgat ggacgacgac ctggatggcg gagacatgac cgccaatcca 61 tttcttatgc aatctgaacc tgaacctagt acggataatc ccttcggagc agctactgga 121 gcttcaaatc cctttgcctt tggtggcgat gatctcgaaa cgggtgcgga accagaggcg 181 gaagcagccc atgatagtga tctcgatccg gcgatgagtt tctttgggac cacgatcgag 241 gcggaggacg atgcgttgag tctgaaatcg ggtgctgagg aggaagacga gggcggcaag 301 aaaccggccc aagcacagca acatgcacac ccgcctccgc cacgccccca ggctcctcca 361 cagagcaccc aagatctaat cagcacggtg tccaatcagc tggaggagac cagttcggag 421 ctacttggtc gcatacccgc aacccgatct ccgagtccag tttcgatgcg ggatctgcac 481 tcgccaagcc ccactccgga ttcgggacta gctgatcttc ttgatgtgtc ggtggacagt 541 ggttcgagtg cccatactca gggcatggat gtggacttga ttgggggcgt tgcaggtggt 601 gtgcccttgg acaatccatt tgcagtgccg acggcggtgc cgaatataca ggcggcagca 661 ccgctgccag ccacgcctgt gaagcagccc ccacgcccac caccacctcg tcctgctcca 721 ccacgtcccg cgcccccagg tcagatggcg ccccaaagac ctccgccacc ggttgccgca 781 gctgctccag ccgccgcaga agcggatgac ctgctggaca tgttcggcac tacgtcgagc 841 aagccggtca agccaccacc acccaagtct aaggaggaca tactaagtct cttcgagcaa 901 ccacaagcac cgccagcacc caaaccggat ttactgcatg acgatctgcc cgaggcgaag 961 gcggaggatg tgccgcccgg acaagacgag ccggacgaag gggaggggga tgggaccacc 1021 tcgcgggatg agccggtatt cacctccctg ctgatacgac cagacgagag tacacatgac 1081 ataacctccc aaccgcaggc ggctacggga ctggaacggc aggcgaatca catggcggcg 1141 cccccggaaa cggccagcag acagagggcg cccacgccgg atatcgagat aaccacggtg 1201 gaggatctgc cgcgttccga tgacgaggac gaggacgaga gggatgttaa acaggaaccg 1261 gaagtcgagg cagagccaca aattgaaccg gaaacggagc ccgagatcat ctctgatcac 1321 agtccgccaa cggaatcgtt tgttaccacc cagatggctc tcgctaatga tgaacctcta 1381 actagcgagc ccgagccgga gcaaatggac accggtctcg actttccgct ggccaccagt 1441 gacctggcca gtggccaact gtccgccaac cccttcgcca gccccgagga ggaggaagag 1501 ccgagcttcg cgcccgttcc agcggtggtg gccaatatct ttgccgtgga cgatttggaa 1561 cctgaagtgg agcctccgac gacggaagtg gcgcccagct atacggcaaa catctttgcc 1621 gctgagccgg acgaattcga cgccttctcg gccaagttcg actcagtgaa gaaggacaat 1681 attagcatac tggaaggttt tggaggatcc ggagccataa cgcccacggg cggagacgct 1741 tggggggaca gtgcttttgg atcggccaca atctcagcta atgcctttgg cgacaccaac 1801 tcggcggacg atgggttcgg caatgaggac gacgacttct acgcgatgca ggcaccagca 1861 cgcgcggatt ccgtggaatc ggtagacaag gagtttagcg tggttatccg cccgaaggcg 1921 gagggaagtg gtggagtggc cccccaactg gcgccaccgc caccgccggc gcgggccgcc 1981 aaccaggcac agaccacatc accgcccggc tcaaccgtaa atcccttcga ggatgtcagt 2041 ggcttcccgg ctcctgggcc accaccaacc gatggaagcg ccatgaaacg cacggactcg 2101 caggacacgc cacagacacc actctatgac gaggatgtgt cgcagccact ggaggagttt 2161 ccgcgactcc attatgtggg acccggctgg gagatgcagc tgcgtcagcc caacaagaag 2221 aagatcaccg gacagcgctt ctggaagaag atcttcgtcc gcctggtggt gcagaacgac 2281 gtgccggtgg tgcagctgct caaccaggcg ggcgacaagc agcccttcca ggaactgcca 2341 ttgcaaccct cgtattccgt gtcggagatc ggggcccagc agtacgatca gttcggcaag 2401 atattcacca tgaagctgca gtacattttc tacaaggagc gacccggggt gagacccggc 2461 caggtgacca aggcggagcg gatcaccaac aagctgacca agttcgcaca atacgccatc 2521 gctggcgact acgagggcgt caaggagttt ggcagcgatc tgaagaaact gggcctgccc 2581 gtggagcatg ccccgcagtc gtcgcagctc ttcaagatcg gatcgatgaa ctacgaggac 2641 atgaagcagt tctccgtttg catcgaggaa gcgctgttca aactgcccgc cctgcgggaa 2701 cgagcattga cctacaaaat ggaggaggtt caagtgaccg ccgtggatga gatcactgtg 2761 gagcaggact tcgaggggaa gatccttaag cagattgccc gggtgcgact attcttcctc 2821 gccttcctca ccggcatgcc caccattgag ttgggcgtga acgatatgtg gcggcagggg 2881 aaggaggtcg tcggccggca cgacatcatc ccggtggcca ccgaggagtg gatccggctc 2941 gaggcagttg agtttcacag tgtggttaat cagcaggagt acgagagaac gcgcaccatc 3001 aaattccaac cgcccgatgc caactacatt gaactgctgc gcttccgtgt gcgtccgccc 3061 aagaatcgcg aacttccgtt gcagctcaag gccacctggt gtgtcaccgg caacaaggtg 3121 gagctgcggg ccgacatcct ggtgccggga ttcacctccc gcaagctggg ccaaatcccc 3181 tgcgaggatg tctcggtgcg cttccccatt cccgagtgct ggatttactt gttccgcgtg 3241 gagaagcact tcagatatgg atcagtcaag tcggcacatc ggcgaactgg caagattaag 3301 ggaatcgagc ggatactggg tgccgtggac acgctgcagg agtcgctgat cgaggtgacc 3361 tccggacagg ccaagtacga gcatcatcat cgggccattg tgtggcgttg tccccgtttg 3421 cccaaggagg gtcagggtgc ttataccacg catcagctgg tctgccgtat ggcccttact 3481 tcgtatgacc agatcccaag cgaactggcg ccatacgcat tcgtggagtt cactatgccc 3541 gccacgcagg tctcgcatac caccgtgcgc tccgtgagtg tgcaggattc ggatgccgac 3601 gagccgccgg agaagtacgt ccgctacttg gcacggcacg agtacaaggt tggcatcgag 3661 accacgcacg gcgagtccac gaacgcgtat ctggcggcaa cgcgtcccat tcgcgaggag 3721 ccgcccagca cggccaccaa gccaactgca tccccggttc cgcctagcga ttcggactcc 3781 gactccaact aaggtggcaa atccaaataa ccgagggaat tgaacggcag tacacccaag 3841 cagctttctg tagatattcc acgtgcatgg ttttcccaat cgttcttgtt aaatacctat 3901 tatataatac acatagatgt atctgtcccc taatatatat tttcgtgttc gtctgccgca 3961 atttccccct ttagcttttg cagcgtgttc atcgcgttgg gtttaggtaa atattagttg 4021 acaataatgt taagtgcagg aactgaagag tgcgaggatt acgaagcaga cgataggatg 4081 aacactgtgt aaaaagccaa ataagtgagg accgagacga agctggtgga tctgtggaca 4141 cgtcactgga ggagaagata gctaaagcgt cttaagaacc ctacaaaccc gcagccacag 4201 ccataatcac ataacctaac ctagcctccc ctaaaacgaa aacaaaattg cgttacttgt 4261 agccatacga tcacgttaaa gttaattgat atcagaccag atcgtacgta aagtcaaccc 4321 atacatatgc atagggataa ttgttataat ctcaaacata cacacacgaa gcatatatat 4381 tcaataactg atgtaatctg aactaggcat taagccaggg aaattaaaag caatttcccc 4441 atgcagcatt ccaaaaaggc tcaaatgcac ataggggtaa cacaactata acgagctgcc 4501 agccttacat aagattaacc aacgctggct ccagcagcca acttcgcata ttgttaacca 4561 aatgttgatg gctggaaaaa ggtaaagacg ccagtttcgc ataggttaat taacactgga 4621 gtgagctgct agctttacac aaagtcaatc tagctggtca gactacatag tgtgggaagt 4681 ttaacgtaaa actatctata gccatcagat acactttaag cttatgtata ccattgattt 4741 aacgatacat ttatagatga attcaaaact ccaagcgaaa gctaaacata accggaaatg 4801 catattcaaa tgttattgtt gtgaatcaaa ttaaattata ttcaaactaa actaaaaagt 4861 aaaggaaaac aatataggca aatcatcttt gttatcgcaa aaagtaaact aaagtgtatg 4921 aggaaaccaa aaaaaaaatc taacttaaac ttaacgaaga tgttcataac tacgtaggtc 4981 attccacgtc aaacatggca cacaacttga ggcacctctt ggaaaaaata cgaaacaatt 5041 tttttcctat tagggattaa aaaaaaacat catgttaatt ttctttgtat tccggcgtac 5101 agacaaaact acataatttt taatataaaa aaatatattt taatactcta attgacttct 5161 gtgtgcaact tttaaataaa ttatttacgc aagccttaag tttattttta tttcataaga 5221 aagagctttt aactttgaac cccgccaata aatgaaataa aaaaatatcg tatacagatt 5281 gtaaagtagc ctcctctgtc gtaaaaaaat ttgttttcaa ttaaagtggg gacctcaaat 5341 tgcactccat gttcgacgtt taaagaccca tatgccataa ctattgatat taattaataa 5401 ctgattgatt gattgcgttt aataggaaga ttgcataaaa ctagatttgt taattgtgcg 5461 tgttaaatga atatattcta tgatcccagc ttaaccacct cataaaacgt ttgcctttct 5521 agatttctta ttcactccat aactccaaat caacatatat tccatgtcag acagctatcc 5581 tacgaacact taaaacgact tgcaatggaa tcacggttaa gtgttgatag agaatgtgta 5641 tattgtaccc ctaagaagcg attcttcatt catgtattat gtatgttaca ttatttacct 5701 acgtttaatt atacaaatat tatatatcgt ctataacata tgtattgtat gtacaataaa 5761 aagaaaaatc atgtaaacag accgatcggt tgacaaacac tctcacatgt tatatttata 5821 aattaattat acaaaaatcg acggtgccga tgcaatatat actcccgatc cgtttcggat 5881 tgagagcata tactgcgctg ggattgatcg ttattataca aatatgcggc gaaagctaat 5941 ggtattaacc gataaactaa attcaatgta atgaattatt atgaaccgaa caaaaaaaaa 6001 acgcattatg atggaacatt atctagtcaa atgagaaaat aaatattgag acaacaaata 6061 ttaagcaatg caaa