Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017153650 7927 bp mRNA linear INV 09-DEC-2024 dorado (Dora), transcript variant X2, mRNA. ACCESSION XM_017153650 VERSION XM_017153650.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153650.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7927 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7927 /gene="Dora" /note="zinc finger SWIM domain-containing dorado; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065615" CDS 1526..7792 /gene="Dora" /codon_start=1 /product="zinc finger SWIM domain-containing protein 8 homolog isoform X2" /protein_id="XP_017009139.2" /db_xref="GeneID:108065615" /translation="MDRFSSDDSIRFEEDSLCSWSSEPESLCNNWRGWKKPAAGSGAG SGGLSGMGSGMAIAFGAGASASCTPGGSGAAMASTSTCGRYYVSTLAELAARCVASYI PFELVEHVYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLANSSADEFNRGDSLFRVRAV KDPLQIGFHLSASVSQTPRAYFNVAVTFDRRRISSCNCTCTSSAYWCSHVVAVCLHRI HCPQEVCLRAPVSESLTRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSAQPTAI NTVCGAPDPTAGASINDQTSWYLDEKTLHNNIKRILIKFCLPAPIVFSDVNYLTNSAP PAAAEWSSLLRPLRGREPEGMWNLLSIVREMYRRCDRNAVRLLEIITEECLYCDQILI WWFQTKLALMMGSHGHSGGKHSNTHSNSTALQHACSSLCDEIVALWRLAALNPGLAPD ERDMLHAQFTAWHLKILDRVVKSRMMPSSYTNKHQQNSRSETELFIGFKPAIEACYLD WEGYPIPGVTHTHDTNPIYYSPFTCFKHTDLKGESSNPGQLNATQALMTNNKHYNYFS ASSDHAGMHAGAFKQRLDRPFRESRFYANPSDLDGGSAALPGGGGNGRFSTGNLGAVV GGAGGGGSVAGGVTGGGGGGVNNSVGAATVEANTVQLQQQQQQLVSGSSGVGGSAANA KAAGGAADGNRSSASSEGFCENDDFGGDTSSSHNYCPPGGGQAVVPGQKSALTESDSQ SSFDAVSQQSKDEPPVGVPVGVEQVLSTSDTSSASSASSSASTASGSSNSSTSSMLMA GQEAAVGGAVQQAPRRLSKDESFSSSSDEFNQAGGSAAGGVAAGESAQGGAVATAGGD LTPVPSTSAAARAALAASCSAVPVTTPLQATSSVGASVEQPSTSSASVHAARTLAAAV AASSDKPHVFSNVRPTEDAWDILLARAEGLHAHGHGGEACILAVRLAEQMLANPPNLL LELPPAPKRKGKKQNVNPISHQLTVVASATLSKCAFLCTVLSENSEHYHIGFRICLFA LEMPRPPASTKPLEVKLANQEADILALLKRLPLGSAELQVIRERAEQLRSGTFKTRGE ALLPINLATFIFDALVTLSPASGSAIGPGVASSSSSSGAGSAAGKSMVNPGSRLMLYK HNSDESLGFDAAVAALGLKANVSEAEHPLLCEGTRRQRGDLALTLLSHYKDEPRKIAK IMEKLLDREIHTLLNAPLLPAYYSSNPPVRTPSNQPTRREEHDYGGSGSGGCASSNCN PVANLCELLPADYGSVGGNSRPHSSTSAELELSMCALSMASSQSGGGGGGGGGGGGGG QGMVPTPNAAGNTGTPSSSSTTVSGGQNPNGNPSGSGGGNGGNGGGGSSSSSRSKESR YKGKRAYPSIPNQPSEASAHFMFELAKNVLTKAGGNSSTSLFTQASTSQNHHGPHRAL HMCAFQLGLYALGLHNCVSPNWLSRTYSSHVSWILGQAMEIGAPAISFLIDTWEAHLT PPEAAGMADRASRGWDSNMVYPAAELALSVLPHAAALNPNEIQRAILQCKEQSDLMLE RACLTVETAAKGGGVYPEVLFQVARYWYELYMRNTPNNSEHEPHEDTMDHSAVSLSAL IESQQQHELQQQQQQQAVQQQQAVQQQQQQQQQVVQQQQQVVQQQQLGMPNPGVPGGP GGLPVAVPPPVVGSVPNPQAQFQPVGVASLAPLGLAPYPPYSFCQGLYAHHHNLSYPP GQMQMYISAGPPPPPQGYGGYQQAPPQQPPNQQQQQQVVQQQQQQVVQQQQVQMAGQA PPGHPGQQVHPGQPPSGFQQPPPPGAFQTLPPQAYQAMQAGPPGPPMGPPQGYYGPPP PPPPNGGPPGVGVNVGVMPMRQHQHQHPVYPFMQQAPPQPQQQQQPPPSQPPVRQRQP HQFTPTQLRYLLAAYNVGMLAMETLARRVHDDRPQAKYARNPPYGEDVKWLLRISKKL GTQYLHQFCICAVNSIVSPFVLHDVAIESAHYLGRNNHQLVMQHLRSALTPLVQKCQQ MYIQCIHQKLYHLTQGDYEEFASIVVAARAAFQITPEGSAQFKDWLQSIKRSKSCKKE LWTQINAALQSNSK" misc_feature 1913..>2326 /gene="Dora" /note="Uncharacterized protein, contains SWIM-type Zn finger domain [Function unknown]; Region: SWIM; COG4715" /db_xref="CDD:443750" ORIGIN 1 gttttcatcg gtgtttctcc acctccgacg accgactgct ttgcgtcgct cgtttcacct 61 acgaaagtaa aaacaaagcc gtgcaaaagt gtccgaaaac cgtgcgtagc ttcagacaat 121 tcgtaactcg gccagccaac tcgagaggcg ccgttttggg ccgttcccgt tgtcggtact 181 cgcggaatcc agcggaaatt aaggactttt gaaaaacgtt cgccccaaac gcatttcgtt 241 cgttcactca cacacacaca cacgcacagt cgcagacaaa cacatcgcgc agcgcatata 301 cacaaagaaa agaaggcagt gaaaatcgac aagcgcacgc atgcacacac agaggcgaaa 361 aagtgttgat atatatccaa tatattgata tatatttata tgtatattga tgttgtgtgc 421 accgttgttg ttactgctac tgccgtgtga gtgagagtgg gacagagtga gtggcagcag 481 tgtgggcgag ggagggagcg cgcaggataa agcgaagatg agccacaaag caaaggagtg 541 aaaaaataat taacggcgaa gagagtggaa agaacagagc gcactgaaga ggagcaggag 601 cagcagcaaa actaacaaca tcaacaacaa cgactaggag acccccttca actacaacta 661 caaattggtc ctctcatttt ggcagtcgtg caagccccat ctcgctctct ctttcggtgg 721 gggatacgaa aaagttcaca tgcaacaaca acgacaacaa acaatagcag tcgcagtcga 781 cgcgggcaga ggcagaggca gcgacagaga ccgcggcgca ctgaacgtat tttgtacata 841 taaacaaaaa tagtttttaa actcccaaat ctaaatctaa atctaaagtt aaaactaaag 901 ccctaagcat aaatctacag taaataagtt aattaaaagc aagcaaatca agcatagaga 961 aacgcgaggt agagaaaggg gaggagagag acaaagagag agatagagag agagaggaga 1021 acgctcaaaa gaaattcgcc ttttacacga ttttaaattg agcgtttggt ttggcagaga 1081 tccattatac atacatccat ccaaaaaaaa aaaacgaaaa aaatagcggg agagagagag 1141 gagcagggcc gagcggagcg gagcaacaac aaacaatcgg ggagcgggag cgggagcggg 1201 agcgggagca gctgaaaaag gagcaactgt aaacacacac aatctcagcc tcacgctggc 1261 gaatcgcaac ggcagcaaca acaacagagg aggaggcggt gacgctggag gcggggcagc 1321 tgtgcccgcc gcttcccgca acaacaacaa caaccacaac aacaacggag gcggcaacaa 1381 caacaatgga ggcggaggag cggctgcagt cggcgctggc gccgaaggag caggcggcgg 1441 aggaggagcg ggcagagatg gtgctgcagc gggaggggga gcgggagcgg gaggagcagc 1501 agccaacgaa tggaacccag aggaaatgga ccgcttcagc tccgacgact ccatccgctt 1561 cgaggaggac tcgctgtgca gctggagctc cgaaccggag tcgctgtgca acaactggcg 1621 cggctggaag aagcccgctg cgggcagcgg agcaggcagc ggcggcctga gcggcatggg 1681 cagcggcatg gcgatagcgt tcggagcagg tgcctccgcc tcctgcacgc cgggcggcag 1741 tggagcggcc atggccagca catccacctg cggcagatat tatgtttcca cattggccga 1801 actggcagcc cgctgtgtgg cctcctacat accgttcgag ctggtggagc acgtgtatcc 1861 gccggtccca gagcagctcc agctacgcat tgcgttctgg agctttccgg acaacgagga 1921 ggacatccgg ttgtattcct gcctggccaa cagctcggcg gatgagttca atcgcggcga 1981 ctcgttgttt cgcgtgcgag ccgtcaagga tccgctgcaa ataggctttc acctgtcggc 2041 cagcgtgagt cagacgccgc gtgcgtactt caatgtggcg gtcacctttg accgccgacg 2101 catctcctct tgcaactgca cctgcacctc gtccgcctac tggtgctccc acgtggtcgc 2161 cgtttgtctg catcgcatcc attgccccca ggaagtctgt ttgcgggcac cggtctccga 2221 atcgctgacc cgcctgcaac gcgaccagct gcaaaagttc gcccagtatc tgatcagcga 2281 gctgccccag cagatcctgc cgacggccca gcgactcctg gatgagctgc tcagcgccca 2341 gccgacggcg atcaatacgg tgtgcggtgc acccgatcca acggctgggg cctcgatcaa 2401 cgaccagacc agctggtatc tggacgagaa gacgctgcat aacaatatca agcggatact 2461 catcaagttc tgtttgcccg ccccgattgt gtttagtgat gtcaactatc tgaccaactc 2521 ggctccaccg gcggcggccg aatggagctc tttgctgcgg ccgctgcgag gtcgtgaacc 2581 ggagggcatg tggaatctgc tctcgattgt gcgcgagatg tacaggcgct gcgatcggaa 2641 cgcagtgcgt ctgctggaga tcatcaccga ggagtgcttg tactgcgatc aaatactcat 2701 ctggtggttc cagaccaagc tggccctgat gatgggctcc cacggccatt cgggcggcaa 2761 gcactcgaac acgcactcca attcgacggc cctgcagcac gcgtgcagtt cgctgtgcga 2821 cgagattgtg gctctgtggc ggctggccgc tttgaatccc ggcctggcgc cggacgagcg 2881 ggacatgctg catgcccagt ttactgcctg gcacctcaag atactcgatc gcgtggtcaa 2941 gagccgtatg atgccatcgt cgtacacgaa caagcatcag cagaattcgc gatcggaaac 3001 ggagttgttt attggcttca agccggccat tgaggcatgc tatttggatt gggagggtta 3061 tcccattcct ggagtgactc acacccacga cacgaatccc atctactact caccgttcac 3121 ctgcttcaag cacacggacc tcaagggcga gtccagcaat cccggccagc taaacgccac 3181 ccaggcgctg atgacgaaca acaagcacta taattacttt agtgcgtcca gcgatcatgc 3241 gggcatgcat gcgggagcct ttaagcagcg attggatcga ccctttaggg agtcgcgatt 3301 ctatgcgaat ccgagcgatt tggatggcgg atcagcggca ttgcctggcg gaggaggaaa 3361 cggcaggttt tccacgggta atctgggtgc tgttgtcggt ggagcaggag gaggaggcag 3421 cgtcgcagga ggtgtcaccg gcggtggagg aggaggagtg aacaactcgg ttggagcagc 3481 gaccgttgaa gcgaataccg tacagctgca gcagcagcag cagcagctgg tcagcggctc 3541 atcgggagtc ggtggctcgg cggcaaatgc caaggcagcc ggaggagcag ccgatggcaa 3601 tcgctcgagt gccagcagcg agggattctg tgagaatgac gatttcggcg gcgacaccag 3661 cagcagtcac aattactgcc caccgggcgg cggacaagcg gtggtgcctg gccagaaatc 3721 ggccctcacg gagtctgatt cgcagagcag tttcgatgcc gtgtcgcagc agagcaagga 3781 tgagccgcca gtgggtgtgc cagtgggtgt agaacaagtg ctctccacct cggacacttc 3841 gtcggcctcg tcggcatcgt catcggcttc gactgcgtcg gggagctcga acagctccac 3901 ttcctcgatg ctgatggctg gtcaggaggc tgctgttgga ggagcagtgc agcaagcacc 3961 gcgtcgcctg agcaaggatg aatcctttag cagcagcagc gatgagttca atcaggcggg 4021 aggatcggca gcgggtggcg tggctgctgg ggaatccgca cagggaggag cggtggccac 4081 agctggcgga gatctcacgc cagtgcccag cacttcggca gccgcccgag ctgccttggc 4141 cgccagttgc tccgcggtgc ctgtaactac acctcttcaa gcaaccagtt cggtcggtgc 4201 ttcggtggaa cagcccagca cctcatccgc ctccgtgcac gcagctcgaa ctttggcagc 4261 ggctgtggcc gcctccagcg acaagccgca tgtattctcc aatgtccggc ccacggagga 4321 cgcttgggac atactgttgg cccgagccga gggactgcat gcccatggac acggcggcga 4381 ggcctgcatt ttggccgttc gcctggccga gcagatgctg gccaatccgc ccaatctgct 4441 gctcgaactg ccgcccgcac cgaagaggaa gggcaagaag cagaacgtga atcccatctc 4501 gcatcagctg accgtcgtcg cctccgccac gctgtccaaa tgcgctttcc tctgcaccgt 4561 gctgtcggag aattcggagc actatcacat cggctttcgg atatgtctgt ttgcgttgga 4621 gatgccgcga ccgccggcta gcaccaagcc gctggaggtg aagctggcca accaggaggc 4681 cgacatactg gcgctgctca agcgtttgcc gctcggctcg gcggagctgc aggtgattcg 4741 cgagcgagcc gagcagctgc gcagcggaac cttcaagacg cgcggcgagg ctctgctgcc 4801 gatcaacctg gctacgttta ttttcgatgc tctggttacg ctcagtccgg ccagtgggtc 4861 tgccattgga cccggagtgg cttcttcttc aagctcaagt ggcgcaggaa gtgcggctgg 4921 caaatctatg gtaaatccag gctcccgttt gatgctctac aagcacaaca gcgacgagag 4981 cctcggattc gatgctgcag tggccgcgct tggactgaag gccaatgtct cggaggcaga 5041 gcatccgctg ctgtgcgagg gaacccgccg gcagcgcggc gatctcgccc tgaccctgct 5101 ctcccactac aaggacgagc cgaggaagat agccaagatc atggagaagc tgctggacag 5161 ggaaatacac acgctgctga atgcaccgct cctgcccgcc tactactcga gtaatccgcc 5221 ggtgaggacg ccgagcaatc aaccgacgcg gcgggaggag cacgattatg gaggctccgg 5281 ctctggtgga tgcgcctcct ccaactgcaa tccggtggcc aatctgtgtg agctgctgcc 5341 agcggattat ggcagtgtgg gaggaaacag tcgaccgcac agctcgacga gcgccgaact 5401 ggagctgagc atgtgcgccc tgagcatggc gagcagccag tcgggcggcg gcggcggagg 5461 aggaggagga ggaggaggag gtggccaggg catggtgccc acaccgaatg cggcgggaaa 5521 tacgggaaca cccagttcca gcagtactac ggttagcggt gggcagaatc ccaatgggaa 5581 tcccagtggc agtggaggag gaaacggtgg caacggaggc ggcggaagtt ccagcagcag 5641 ccggagcaag gagagccgct acaagggcaa gagggcctac ccatcgatac ccaaccagcc 5701 atccgaggcc agtgcccact ttatgttcga gctggccaag aatgtgctga ccaaggcggg 5761 cggcaatagt tccacctcgc tgttcaccca ggcgagcacc agccagaatc accatggacc 5821 ccatcgtgcc ctccacatgt gcgcctttca gctgggactc tatgctttgg gtctgcacaa 5881 ctgcgtcagt cccaattggc tgtcgcgaac ctattcgtcg catgtctcct ggattctcgg 5941 ccaggcgatg gagattggtg cgccggccat tagtttcctg atcgacactt gggaggcgca 6001 cctcacgccg cccgaggcgg ctggcatggc ggatcgggcg tctcggggat gggacagcaa 6061 tatggtttac cccgccgccg agttggccct ctccgttctg ccccacgccg cagccctcaa 6121 tccgaacgag atccagcgcg cgatcctgca gtgcaaggag cagagcgatc taatgctgga 6181 gcgagcctgt ctcaccgtcg agacggctgc caagggtggc ggtgtctatc cggaggtcct 6241 cttccaggtg gcccgctact ggtacgagct gtacatgcgc aacacgccga acaacagcga 6301 gcacgagccg catgaggata ccatggacca ctcggcggtc agtctgagcg ctttgattga 6361 gtcgcagcag cagcacgagc ttcagcagca gcagcagcag caggcggtgc agcagcagca 6421 ggcagtacag cagcagcaac agcagcaaca acaggttgtg caacagcaac agcaggtggt 6481 gcagcaacag cagctcggca tgcccaatcc cggggtgccg ggcggacccg gaggactccc 6541 tgtggccgtg cccccgcccg ttgtgggctc tgtgccgaat ccgcaggccc agttccagcc 6601 cgtgggcgtc gcctcactgg ctcccctcgg cctggcgccc tatccgccgt atagcttctg 6661 ccagggcctc tacgctcatc atcacaacct gagctatccg cccggtcaga tgcaaatgta 6721 catctcggcg ggaccgccgc cgccgccgca gggatatggt ggctaccagc aggcgccgcc 6781 ccagcagccg cccaatcagc agcagcagca gcaggtggtg cagcagcaac agcagcaggt 6841 ggtccagcag cagcaggtcc agatggcggg tcaggcgccg ccgggtcatc cgggacagca 6901 ggttcatccg gggcagccgc cgtctggctt ccagcagcca ccgccgccgg gagctttcca 6961 gacgctgccg ccgcaggcct accaggcgat gcaggcgggt ccgccgggac caccgatggg 7021 accgccacag ggatattacg gcccaccgcc acctccgcct ccgaacggcg gaccaccggg 7081 agtgggcgtt aacgtgggcg tgatgccaat gcgccagcac cagcaccaac atcccgtcta 7141 ccccttcatg cagcaggcgc cgccgcagcc gcaacagcag cagcagccgc cgccttcgca 7201 gccacctgtg cgacaacgac aaccgcatca attcacaccc acccagctgc gctatctgct 7261 ggccgcctac aatgtgggca tgctggccat ggagacgctg gcgcgacgcg ttcacgatga 7321 ccggccgcag gcgaagtacg cccgaaatcc gccgtacggc gaggatgtca agtggctgct 7381 gcggatcagc aagaagctgg gcacccagta tctgcatcag ttctgcatct gtgcggtcaa 7441 ctcgatcgtc agtccgttcg tcctgcacga cgtggccatt gagtcggcgc actatctggg 7501 caggaataac caccagctgg tgatgcagca cctgcgctcg gcgctcacac cgctcgtcca 7561 gaagtgccag cagatgtaca ttcagtgcat ccatcagaag ctgtaccacc tgacccaagg 7621 tgactacgag gagtttgcca gcattgtggt ggcagcccgc gccgcctttc agattacccc 7681 cgagggcagc gcccaattca aggactggct gcagtccatc aagcgatcca aatcgtgcaa 7741 gaaagagctg tggacccaga tcaatgcggc tctgcaaagc aactccaaat gacaaagact 7801 tgactcctgc aatctgatga cggcagtggc aacaggaaca ttggcgacga cggcggcggc 7861 tgcagcgaca gcggtgaccg cagagtgcaa gtcaacagcg ccggctggcg gtagcagtgc 7921 caacaac