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LOCUS XM_017153594 3094 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017153594 VERSION XM_017153594.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153594.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3094 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3094 /gene="LOC108065580" /note="modifier of mdg4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065580" CDS 403..1920 /gene="LOC108065580" /codon_start=1 /product="modifier of mdg4 isoform X2" /protein_id="XP_017009083.2" /db_xref="GeneID:108065580" /translation="MATTQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIK AHKVVLSSCSSYFKEIFKENPHPHPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQS FLQTAELLAVQGLTAEEKEKPQLPVAPLISEHKLIKTIPSTIRAVNEQQQQQQQVANV AQAQTATQTIEIPTATLLQATTASQVQSQVVAAAAAAAQQLQVQQQQQQHHHVQTTQI QHIQVQSAPPPQQQQQQQQQQQQQQQQQQSQQQQTTPVQTQHLTITNAVALPAASSVK KRKITFSDDDDNMYTTETVDYAVKDEQTIVKTAEMTFLRGAVKMDIPDYIVGEVDDRL SDGATPQTSQDATTGAAQNVAQYSSEYEILTESEMEEKFQADADNTEIAIEMTRLLGT ASGTAGANSGQVMEDAGGGGATTGSSTTVSVTPVKSDSKASGTNDSPNNKWTECQFCK MVITTVNLWRHIRTQHTPQPPRKCDLCNKNFKNKYSLREHIRISHEQKVSIKTEN" misc_feature 493..744 /gene="LOC108065580" /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster proteins bric-a-brac 1 (BAB1), bric-a-brac 2 (BAB2), modifier of mdg4 (doom), and similar proteins; Region: BTB_POZ_BAB-like; cd18315" /db_xref="CDD:349624" misc_feature 1738..1800 /gene="LOC108065580" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1819..1881 /gene="LOC108065580" /note="Zinc finger, C2H2 type; Region: zf-C2H2; pfam00096" /db_xref="CDD:395048" misc_feature 1822..1881 /gene="LOC108065580" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 3094 /gene="LOC108065580" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcagggttg ctctgaaatt ggcaaaaaac aaaatggagg cgtataatat ttttgtttgg 61 catagaatat aaaaaatccc gaatttgtgt gtgcgagaag cgccgtaaac aaaggccgta 121 aaagcggaca aaacagggca gtgcgagcgg ttcttggaac ggtttgatcg gcgcccgctg 181 gaagggaacc agccgcatcg cgttggaagt gcaaacaaaa aaaaaacaga agaaaccgga 241 ggagttcgtt ccactgcatt cgccactctt tgctttgctt gccccttcgc gggaattacc 301 gctaattgga ttggactgga aagcggcgga ggaggagcgc ggcggggaag agggctagga 361 gggaggatag gaggaggcga accgcaaaga gaggacgccg cgatggccac cacccagcaa 421 tattcgctgc ggtggaacaa ctacctgcgc cacctcacct actccctgga caaccaccgg 481 ctgaacgatg acttcgtgga cgtcagcctg tgcgtcgatg gacgcaggat caaggcccac 541 aaggtggtgc tctcctcctg ctcctcgtac ttcaaggaga tcttcaagga gaacccccat 601 ccgcacccag tcattatctt taagttcatc aagtttgagg atctcaactc gatcatcgag 661 ttcatgtacc agggcgaagt caatgtgcag caggaggcgc tgcaatcctt cctgcagacc 721 gccgagttgc tggccgtcca aggactcacc gccgaggaga aggagaagcc gcagctcccg 781 gtggcgccgc tgatcagcga gcacaagctg atcaagacca taccgagcac catacgcgcg 841 gtcaacgagc aacagcagca gcagcagcag gtggccaatg tggcccaggc gcagacggcc 901 acgcaaacca tcgaaatacc cacggccacg ctgctgcagg cgaccaccgc cagccaagtg 961 caatcgcagg tggtggcagc tgccgcagcg gccgcccagc agttgcaggt gcagcagcag 1021 cagcaacagc atcaccatgt acaaaccacc cagattcagc acattcaagt gcaatctgca 1081 ccgcccccgc aacagcagca gcaacagcag caacaacagc agcaacaaca gcagcagcag 1141 caatcccagc agcaacagac gacgcctgtg cagacgcaac acctgaccat caccaatgcg 1201 gtggccctgc cggcggccag ttcggtgaag aagcgcaaga tcaccttctc cgacgacgat 1261 gacaacatgt acaccaccga aaccgttgac tatgccgtca aggatgagca gaccatagtg 1321 aaaactgccg agatgacttt cctgcgcggc gccgtcaaga tggacatacc cgactatatt 1381 gtgggcgagg tggatgaccg gctgtcggac ggagccacgc cgcaaacgtc gcaggacgcc 1441 accaccggag cggcccagaa tgtggcccag tactcgtccg agtacgagat actcaccgag 1501 tccgaaatgg aggagaagtt ccaagcggat gcggacaaca cagagattgc cattgagatg 1561 acccgattgc tgggcaccgc cagcgggacg gcgggcgcga attccggcca ggtgatggag 1621 gatgcgggtg gcggcggtgc gacgactggt tcctcgacta cggtgtctgt gacgccggtc 1681 aaatcggaca gcaaggccag cgggacgaac gattcgccca ataataagtg gacagaatgt 1741 cagttttgca aaatggttat aaccacggtt aatctttgga gacatattcg cacccaacat 1801 accccacaac cgccgcgcaa gtgcgacctg tgcaataaga atttcaagaa taagtacagt 1861 ctgcgggagc acatacgcat ctcgcacgag cagaaggtgt ccatcaagac ggagaactga 1921 tgcgtgctca tcagcctcgg atcgatagga tatatgctta agggagagag atatagttaa 1981 ttacgtccag cttagcgaga agccaaccaa ccagccagcc aacccattta ccctgtgttc 2041 ccatcaaagg ccccccaaaa aaacaaaaaa acaaaaaact agccaaattt gtcaactcaa 2101 atgcaaagca gaatgaagta catagcgtac gttttgggca ctcaaatagc cctcgatgtt 2161 gtttagcccc caatatatag ttctatatat ataaccccat gatagccact aagtcaagtc 2221 agtcagtcag ccggagagtg gagctggtaa tcatcccgtc gttgaccaag ccatgtcatg 2281 tgtccacgta atacgtacat gtaccacttg tattttagtc cacaacttgc tttagttact 2341 tccttatatc gtatatagtt agttggcaaa gtacaagccc ttaaaatcca ttgacacaac 2401 cattatgtat atataaacac acactgaacc gaaaacacag gaatctttgg agattgcagc 2461 tcagatagag tgataatata taaaaagaaa agcagtacag atcacgagga atagaatttt 2521 taagttacct taaatcactt tacttagttg tggtgcccga aatgtattat tttgttctta 2581 aaactctgat attattcagt tttgtatata gagctaggcg acttaacata cttttagaaa 2641 ctatcacccc aaaaaaaaag ggatttctgt ggcagcgcca aaataaattt aaaccgattt 2701 aattcccgaa aaaagctctg tactttgctc acaaaaacga aaaagaaaaa taccccttgt 2761 gtacaaattt acgatacgat aaataatacc caattatcca gcgcgctttt cgaccatctg 2821 tgttcagcat tagagcgttg gcagttgaat gtaaattagc taaattagtt ttagttttag 2881 tttaagttta agccgccctc cacccaaaaa atttcgatcg gacatagttt agtttttttg 2941 gtataactta gttgagtagc ccacacgagc caagtgaaaa cggaagtcac taggattagt 3001 tgaaagtatt ttccaaaaca aacaaaaaaa aaaagagaaa aaaagaagaa aaaaatcgaa 3061 acctgtagaa atcctctcta agacaaactc aaaa