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LOCUS XM_017153593 2808 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017153593 VERSION XM_017153593.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153593.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2808 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2808 /gene="LOC108065580" /note="modifier of mdg4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108065580" CDS 405..2060 /gene="LOC108065580" /codon_start=1 /product="modifier of mdg4 isoform X1" /protein_id="XP_017009082.2" /db_xref="GeneID:108065580" /translation="MATTQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIK AHKVVLSSCSSYFKEIFKENPHPHPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQS FLQTAELLAVQGLTAEEKEKPQLPVAPLISEHKLIKTIPSTIRAVNEQQQQQQQVANV AQAQTATQTIEIPTATLLQATTASQVQSQVVAAAAAAAQQLQVQQQQQQHHHVQTTQI QHIQVQSAPPPQQQQQQQQQQQQQQQQQQSQQQQTTPVQTQHLTITNAVALPAASSVK KRKITFSDDDDNMYTTETVDYAVKDEQTIVKTAEMTFLRGAVKMDIPDYIVGEVDDRL SDGATPQTSQDATTGAAQNVAQYSSEYEILTESEMEEKFQADADNTEIAIEMTRLLGT ASGTAGANSGQVMEDAGGGGATTGSSTTVSVTPVKSDSKASGTNAAMKQEPGTEASSA AEAVESGRTAPPAAVSDEENAQDTGLAPLSCSFCSRHLKSVNALRRHIASRHSEIQGK EHECFICMKSFKTKWSLSTHNSRFHREMGCSTKGFTKIEYTDH" misc_feature 495..746 /gene="LOC108065580" /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster proteins bric-a-brac 1 (BAB1), bric-a-brac 2 (BAB2), modifier of mdg4 (doom), and similar proteins; Region: BTB_POZ_BAB-like; cd18315" /db_xref="CDD:349624" misc_feature 1845..1934 /gene="LOC108065580" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" misc_feature order(1866..1874,1878..1883,1893..1895,1929..1931, 1953..1955,1962..1976,1980..1985) /gene="LOC108065580" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275371" misc_feature 1938..2003 /gene="LOC108065580" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" ORIGIN 1 ggcgcagggt tgctctgaaa ttggcaaaaa acaaaatgga ggcgtataat atttttgttt 61 ggcatagaat ataaaaaatc ccgaatttgt gtgtgcgaga agcgccgtaa acaaaggccg 121 taaaagcgga caaaacaggg cagtgcgagc ggttcttgga acggtttgat cggcgcccgc 181 tggaagggaa ccagccgcat cgcgttggaa gtgcaaacaa aaaaaaaaca gaagaaaccg 241 gaggagttcg ttccactgca ttcgccactc tttgctttgc ttgccccttc gcgggaatta 301 ccgctaattg gattggactg gaaagcggcg gaggaggagc gcggcgggga agagggctag 361 gagggaggat aggaggaggc gaaccgcaaa gagaggacgc cgcgatggcc accacccagc 421 aatattcgct gcggtggaac aactacctgc gccacctcac ctactccctg gacaaccacc 481 ggctgaacga tgacttcgtg gacgtcagcc tgtgcgtcga tggacgcagg atcaaggccc 541 acaaggtggt gctctcctcc tgctcctcgt acttcaagga gatcttcaag gagaaccccc 601 atccgcaccc agtcattatc tttaagttca tcaagtttga ggatctcaac tcgatcatcg 661 agttcatgta ccagggcgaa gtcaatgtgc agcaggaggc gctgcaatcc ttcctgcaga 721 ccgccgagtt gctggccgtc caaggactca ccgccgagga gaaggagaag ccgcagctcc 781 cggtggcgcc gctgatcagc gagcacaagc tgatcaagac cataccgagc accatacgcg 841 cggtcaacga gcaacagcag cagcagcagc aggtggccaa tgtggcccag gcgcagacgg 901 ccacgcaaac catcgaaata cccacggcca cgctgctgca ggcgaccacc gccagccaag 961 tgcaatcgca ggtggtggca gctgccgcag cggccgccca gcagttgcag gtgcagcagc 1021 agcagcaaca gcatcaccat gtacaaacca cccagattca gcacattcaa gtgcaatctg 1081 caccgccccc gcaacagcag cagcaacagc agcaacaaca gcagcaacaa cagcagcagc 1141 agcaatccca gcagcaacag acgacgcctg tgcagacgca acacctgacc atcaccaatg 1201 cggtggccct gccggcggcc agttcggtga agaagcgcaa gatcaccttc tccgacgacg 1261 atgacaacat gtacaccacc gaaaccgttg actatgccgt caaggatgag cagaccatag 1321 tgaaaactgc cgagatgact ttcctgcgcg gcgccgtcaa gatggacata cccgactata 1381 ttgtgggcga ggtggatgac cggctgtcgg acggagccac gccgcaaacg tcgcaggacg 1441 ccaccaccgg agcggcccag aatgtggccc agtactcgtc cgagtacgag atactcaccg 1501 agtccgaaat ggaggagaag ttccaagcgg atgcggacaa cacagagatt gccattgaga 1561 tgacccgatt gctgggcacc gccagcggga cggcgggcgc gaattccggc caggtgatgg 1621 aggatgcggg tggcggcggt gcgacgactg gttcctcgac tacggtgtct gtgacgccgg 1681 tcaaatcgga cagcaaggcc agcgggacga acgcggcaat gaaacaggaa ccgggaactg 1741 aagctagcag tgccgcagaa gccgtcgaaa gcggacgaac tgcaccgcca gcggctgtta 1801 gtgatgagga aaacgcccag gacaccggtc tcgcaccact gagctgcagt ttctgcagca 1861 gacacctcaa gtcggtgaat gccctacggc gacacattgc ctcccggcac tcggagatcc 1921 agggaaagga gcacgagtgc ttcatctgca tgaagagctt caaaaccaag tggtcgttgt 1981 ccacccacaa ctcccggttc catcgcgaaa tgggctgctc gaccaaggga ttcaccaaga 2041 tcgagtatac cgatcactga actaaagctc gccattaatt agaattaaat aagaggttaa 2101 tacgtacaag tagattgtat tttatcatat catagatttt gttgttttcc atttgtggca 2161 agtgagttga agccatccta atcatgctca cacaatcatt tgatatcggt ttctaaatta 2221 gaaccattaa tcatgggttt cgaaaatgtt tatttaaatt ttttgactgg caaagataac 2281 tttgaataag tcagtattta atttataatt tctgtagttt gtactttaat tttgataaaa 2341 acaaaagtaa ttttaaccag ggaccgtaaa taatcattat ttgagatttt tattttaaaa 2401 agactactgt gatattttgt ttaaaacgtc aaaaataacg ttctttttac tcttatccac 2461 aaaggatatg cattttaact aatctggaag ccaaattaac tgttttttgt tcatgtctat 2521 aaagtgctag aaaaccagtt aaattgttga ttaaaatatg taaaaacctc agtaggcctt 2581 ttaaaataaa aatctcaaat aatgattatt tacggtccct gattttaact attactttct 2641 gttacttcac tgttatataa atcaattttg aaaagaaaat gttgtcatta aactgatttg 2701 ctaattttta gattatagaa cctttttacc aaaaccaatt caatcctttg cagtgaatac 2761 aattttttta aaggagtatt gcactagttg acaaaataat ttttgaaa